RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 TMOD3Q9NYL9 352 aa26.59■■□□□ 1.85
SSRP1-204ENST00000529002 PPM1GO15355 546 aaPredicted RBP26.57■■□□□ 1.84
SSRP1-204ENST00000529002 NCAPD2Q15021 1401 aa26.56■■□□□ 1.84
SSRP1-204ENST00000529002 DPEP1P16444 411 aa26.56■■□□□ 1.84
SSRP1-204ENST00000529002 ATG3Q9NT62 314 aa26.56■■□□□ 1.84
SSRP1-204ENST00000529002 SPG7Q9UQ90 795 aa26.56■■□□□ 1.84
SSRP1-204ENST00000529002 KIF24Q5T7B8 1368 aa26.55■■□□□ 1.84
SSRP1-204ENST00000529002 SLC4A9Q96Q91 983 aa26.54■■□□□ 1.84
SSRP1-204ENST00000529002 C10orf71Q711Q0 1435 aa26.54■■□□□ 1.84
SSRP1-204ENST00000529002 MYH14Q7Z406 1995 aaKnown RBP26.53■■□□□ 1.84
SSRP1-204ENST00000529002 TGFB2P61812 414 aa26.53■■□□□ 1.84
SSRP1-204ENST00000529002 EYA1Q99502 592 aa26.53■■□□□ 1.84
SSRP1-204ENST00000529002 CARD14Q9BXL6 1004 aa26.53■■□□□ 1.84
SSRP1-204ENST00000529002 C4AP0C0L4 1744 aa26.53■■□□□ 1.84
SSRP1-204ENST00000529002 FCHSD2O94868 740 aa26.52■■□□□ 1.84
SSRP1-204ENST00000529002 ANKRD26Q9UPS8 1709 aa26.52■■□□□ 1.84
SSRP1-204ENST00000529002 ARFGEF1Q9Y6D6 1849 aa26.52■■□□□ 1.84
SSRP1-204ENST00000529002 PHKG2P15735 406 aa26.51■■□□□ 1.83
SSRP1-204ENST00000529002 TMF1P82094 1093 aa26.51■■□□□ 1.83
SSRP1-204ENST00000529002 TRAPPC3LQ5T215 181 aa26.51■■□□□ 1.83
SSRP1-204ENST00000529002 COL13A1Q5TAT6 717 aaPredicted RBP26.51■■□□□ 1.83
SSRP1-204ENST00000529002 C9orf131Q5VYM1 1079 aa26.5■■□□□ 1.83
SSRP1-204ENST00000529002 ARHGEF1Q92888 912 aaKnown RBP26.5■■□□□ 1.83
SSRP1-204ENST00000529002 RTCBQ9Y3I0 505 aaKnown RBP26.5■■□□□ 1.83
SSRP1-204ENST00000529002 COL5A3P25940 1745 aaPredicted RBP26.5■■□□□ 1.83
SSRP1-204ENST00000529002 KDRP35968 1356 aa26.49■■□□□ 1.83
SSRP1-204ENST00000529002 IFNL2Q8IZJ0 200 aa26.48■■□□□ 1.83
SSRP1-204ENST00000529002 NLGN1Q8N2Q7 840 aa26.48■■□□□ 1.83
SSRP1-204ENST00000529002 RBM42Q9BTD8 480 aaKnown RBP26.48■■□□□ 1.83
SSRP1-204ENST00000529002 CAPN15O75808 1086 aa26.47■■□□□ 1.83
SSRP1-204ENST00000529002 GYS1P13807 737 aa26.47■■□□□ 1.83
SSRP1-204ENST00000529002 KCNA3P22001 575 aa26.47■■□□□ 1.83
SSRP1-204ENST00000529002 RBM46Q8TBY0 533 aaKnown RBP26.47■■□□□ 1.83
SSRP1-204ENST00000529002 CCDC87Q9NVE4 849 aa26.47■■□□□ 1.83
SSRP1-204ENST00000529002 SBF1O95248 1867 aa26.47■■□□□ 1.83
SSRP1-204ENST00000529002 KCPQ6ZWJ8 1503 aa26.46■■□□□ 1.83
SSRP1-204ENST00000529002 SLC24A1O60721 1099 aa26.46■■□□□ 1.83
SSRP1-204ENST00000529002 KLRG1Q96E93 195 aa26.46■■□□□ 1.83
SSRP1-204ENST00000529002 WASHC2AQ641Q2 1341 aa26.45■■□□□ 1.83
SSRP1-204ENST00000529002 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.45■■□□□ 1.821e-6■□□□□ 11.1
SSRP1-204ENST00000529002 PARP3Q9Y6F1 533 aa26.43■■□□□ 1.82
SSRP1-204ENST00000529002 ZNF831Q5JPB2 1677 aa26.42■■□□□ 1.82
SSRP1-204ENST00000529002 RFC4P35249 363 aa26.42■■□□□ 1.82
SSRP1-204ENST00000529002 C16orf71Q8IYS4 520 aaPredicted RBP26.42■■□□□ 1.82
SSRP1-204ENST00000529002 RRAGCQ9HB90 399 aa26.41■■□□□ 1.82
SSRP1-204ENST00000529002 RPS6KA4O75676 772 aa26.4■■□□□ 1.82
SSRP1-204ENST00000529002 JMYQ8N9B5 988 aa26.4■■□□□ 1.82
SSRP1-204ENST00000529002 SRP68Q9UHB9 627 aaKnown RBP26.4■■□□□ 1.82
SSRP1-204ENST00000529002 RC3H1Q5TC82 1133 aaKnown RBP26.39■■□□□ 1.82
SSRP1-204ENST00000529002 RNF181Q9P0P0 153 aa26.39■■□□□ 1.82
SSRP1-204ENST00000529002 POLKQ9UBT6 870 aa26.39■■□□□ 1.82
SSRP1-204ENST00000529002 CNTNAP4Q9C0A0 1308 aa26.39■■□□□ 1.81
SSRP1-204ENST00000529002 ADRA2BP18089 450 aa26.38■■□□□ 1.81
SSRP1-204ENST00000529002 EIF4A2Q14240 407 aaKnown RBP26.38■■□□□ 1.81
SSRP1-204ENST00000529002 DCAF5Q96JK2 942 aa26.38■■□□□ 1.81
SSRP1-204ENST00000529002 PIM2Q9P1W9 311 aa26.38■■□□□ 1.81
SSRP1-204ENST00000529002 PLEKHG2Q9H7P9 1386 aa26.37■■□□□ 1.81
SSRP1-204ENST00000529002 CHRNA5P30532 468 aa26.37■■□□□ 1.81
SSRP1-204ENST00000529002 TNNT2P45379 298 aaPredicted RBP26.36■■□□□ 1.81
SSRP1-204ENST00000529002 DDR1Q08345 913 aa26.36■■□□□ 1.81
SSRP1-204ENST00000529002 FSTL1Q12841 308 aa26.36■■□□□ 1.81
SSRP1-204ENST00000529002 FKBP8Q14318 412 aa26.36■■□□□ 1.81
SSRP1-204ENST00000529002 TNRC6CQ9HCJ0 1690 aaKnown RBP26.35■■□□□ 1.81
SSRP1-204ENST00000529002 KDM6AO15550 1401 aaPredicted RBP26.35■■□□□ 1.81
SSRP1-204ENST00000529002 DALRD3Q5D0E6 543 aaKnown RBP26.35■■□□□ 1.81
SSRP1-204ENST00000529002 ERVV-2B6SEH9 535 aa26.34■■□□□ 1.81
SSRP1-204ENST00000529002 KDM2BQ8NHM5 1336 aa26.34■■□□□ 1.81
SSRP1-204ENST00000529002 CCDC88AQ3V6T2 1871 aa26.34■■□□□ 1.81
SSRP1-204ENST00000529002 PTCD1O75127 700 aaKnown RBP26.33■■□□□ 1.81
SSRP1-204ENST00000529002 TNS4Q8IZW8 715 aa26.33■■□□□ 1.81
SSRP1-204ENST00000529002 TJP1Q07157 1748 aa26.32■■□□□ 1.8
SSRP1-204ENST00000529002 CDCA8Q53HL2 280 aa26.32■■□□□ 1.8
SSRP1-204ENST00000529002 CRKLP46109 303 aaKnown RBP26.31■■□□□ 1.8
SSRP1-204ENST00000529002 CABP4P57796 275 aa26.31■■□□□ 1.8
SSRP1-204ENST00000529002 PCNTO95613 3336 aa26.31■■□□□ 1.8
SSRP1-204ENST00000529002 RASSF7Q02833 373 aa26.3■■□□□ 1.8
SSRP1-204ENST00000529002 ADAMTS7Q9UKP4 1686 aa26.29■■□□□ 1.8
SSRP1-204ENST00000529002 ZNF530Q6P9A1 599 aaPredicted RBP26.29■■□□□ 1.8
SSRP1-204ENST00000529002 AFDNP55196 1824 aaKnown RBP26.29■■□□□ 1.8
SSRP1-204ENST00000529002 USP42Q9H9J4 1324 aaKnown RBP26.29■■□□□ 1.8
SSRP1-204ENST00000529002 PRELPP51888 382 aa26.26■■□□□ 1.79
SSRP1-204ENST00000529002 SMC1BQ8NDV3 1235 aa26.26■■□□□ 1.79
SSRP1-204ENST00000529002 POLRMTO00411 1230 aaKnown RBP26.25■■□□□ 1.79
SSRP1-204ENST00000529002 HSP90AB1P08238 724 aaKnown RBP26.25■■□□□ 1.79
SSRP1-204ENST00000529002 PLEKHO1Q53GL0 409 aaPredicted RBP26.25■■□□□ 1.79
SSRP1-204ENST00000529002 NFATC2IPQ8NCF5 419 aa26.24■■□□□ 1.79
SSRP1-204ENST00000529002 TM4SF1P30408 202 aa26.23■■□□□ 1.79
SSRP1-204ENST00000529002 INTS5Q6P9B9 1019 aaKnown RBP26.23■■□□□ 1.79
SSRP1-204ENST00000529002 AEBP1Q8IUX7 1158 aa26.23■■□□□ 1.79
SSRP1-204ENST00000529002 MTHFSP49914 203 aa26.22■■□□□ 1.79
SSRP1-204ENST00000529002 POLR3GLQ9BT43 218 aa26.22■■□□□ 1.79
SSRP1-204ENST00000529002 HSPA1AP0DMV8 641 aaKnown RBP26.21■■□□□ 1.79
SSRP1-204ENST00000529002 HSPA1BP0DMV9 641 aaKnown RBP26.21■■□□□ 1.79
SSRP1-204ENST00000529002 SCN11AQ9UI33 1791 aa26.2■■□□□ 1.79
SSRP1-204ENST00000529002 TIAM2Q8IVF5 1701 aa26.2■■□□□ 1.79
SSRP1-204ENST00000529002 USPL1Q5W0Q7 1092 aa26.2■■□□□ 1.78
SSRP1-204ENST00000529002 DLEC1Q9Y238 1755 aa26.19■■□□□ 1.78
SSRP1-204ENST00000529002 DNAJC10Q8IXB1 793 aa26.18■■□□□ 1.78
SSRP1-204ENST00000529002 VIRMAQ69YN4 1812 aaKnown RBP26.17■■□□□ 1.78
SSRP1-204ENST00000529002 AMOTQ4VCS5 1084 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms