RNA–Protein interactions for RNA: ENST00000528953.1

AP002008.2-203, humanhuman

TSL 1 (best)

Gene AP002008.2, Length 707 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.2-203ENST00000528953 KDRP35968 1356 aa23.85■■□□□ 1.41
AP002008.2-203ENST00000528953 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.84■■□□□ 1.41
AP002008.2-203ENST00000528953 PHF14O94880 888 aa23.84■■□□□ 1.41
AP002008.2-203ENST00000528953 SSFA2P28290 1259 aa23.84■■□□□ 1.41
AP002008.2-203ENST00000528953 ITPK1Q13572 414 aa23.84■■□□□ 1.41
AP002008.2-203ENST00000528953 NLGN2Q8NFZ4 835 aa23.84■■□□□ 1.41
AP002008.2-203ENST00000528953 C1orf141Q5JVX7 400 aa23.83■■□□□ 1.41
AP002008.2-203ENST00000528953 KDM6AO15550 1401 aaPredicted RBP23.83■■□□□ 1.4
AP002008.2-203ENST00000528953 MTHFSP49914 203 aa23.82■■□□□ 1.4
AP002008.2-203ENST00000528953 CABP4P57796 275 aa23.81■■□□□ 1.4
AP002008.2-203ENST00000528953 CC2D1BQ5T0F9 858 aaKnown RBP23.81■■□□□ 1.4
AP002008.2-203ENST00000528953 SMIM5Q71RC9 77 aa23.81■■□□□ 1.4
AP002008.2-203ENST00000528953 GNPATO15228 680 aa23.8■■□□□ 1.4
AP002008.2-203ENST00000528953 PELP1Q8IZL8 1130 aaKnown RBP23.79■■□□□ 1.4
AP002008.2-203ENST00000528953 RBM42Q9BTD8 480 aaKnown RBP23.79■■□□□ 1.4
AP002008.2-203ENST00000528953 UBR3Q6ZT12 1888 aa23.78■■□□□ 1.4
AP002008.2-203ENST00000528953 SLC4A9Q96Q91 983 aa23.77■■□□□ 1.4
AP002008.2-203ENST00000528953 CD2APQ9Y5K6 639 aa23.77■■□□□ 1.4
AP002008.2-203ENST00000528953 NPC1L1Q9UHC9 1359 aa23.77■■□□□ 1.4
AP002008.2-203ENST00000528953 DIAPH1O60610 1272 aaKnown RBP23.75■■□□□ 1.39
AP002008.2-203ENST00000528953 ZNF784Q8NCA9 323 aaPredicted RBP23.75■■□□□ 1.39
AP002008.2-203ENST00000528953 HMOX1P09601 288 aa23.74■■□□□ 1.39
AP002008.2-203ENST00000528953 AKAP4Q5JQC9 854 aa23.74■■□□□ 1.39
AP002008.2-203ENST00000528953 NFATC2IPQ8NCF5 419 aa23.74■■□□□ 1.39
AP002008.2-203ENST00000528953 RC3H1Q5TC82 1133 aaKnown RBP23.73■■□□□ 1.39
AP002008.2-203ENST00000528953 RTCBQ9Y3I0 505 aaKnown RBP23.73■■□□□ 1.39
AP002008.2-203ENST00000528953 CNTNAP4Q9C0A0 1308 aa23.72■■□□□ 1.39
AP002008.2-203ENST00000528953 ZNF831Q5JPB2 1677 aa23.71■■□□□ 1.39
AP002008.2-203ENST00000528953 GRIN3BO60391 1043 aa23.71■■□□□ 1.39
AP002008.2-203ENST00000528953 PTCD1O75127 700 aaKnown RBP23.71■■□□□ 1.39
AP002008.2-203ENST00000528953 YBX3P16989 372 aaKnown RBP eCLIP23.71■■□□□ 1.39
AP002008.2-203ENST00000528953 CNGB1Q14028 1251 aaPredicted RBP23.71■■□□□ 1.39
AP002008.2-203ENST00000528953 TRAPPC3LQ5T215 181 aa23.71■■□□□ 1.39
AP002008.2-203ENST00000528953 ADRA2BP18089 450 aa23.7■■□□□ 1.38
AP002008.2-203ENST00000528953 CHD4Q14839 1912 aa23.7■■□□□ 1.38
AP002008.2-203ENST00000528953 GOLGB1Q14789 3259 aaKnown RBP23.69■■□□□ 1.38
AP002008.2-203ENST00000528953 RPS6KA4O75676 772 aa23.68■■□□□ 1.38
AP002008.2-203ENST00000528953 ARHGEF1Q92888 912 aaKnown RBP23.67■■□□□ 1.38
AP002008.2-203ENST00000528953 SLC52A2Q9HAB3 445 aa23.67■■□□□ 1.38
AP002008.2-203ENST00000528953 MMP10P09238 476 aa23.66■■□□□ 1.38
AP002008.2-203ENST00000528953 MTHFSDQ2M296 383 aaKnown RBP23.66■■□□□ 1.38
AP002008.2-203ENST00000528953 LGR6Q9HBX8 967 aa23.66■■□□□ 1.38
AP002008.2-203ENST00000528953 COL3A1P02461 1466 aaPredicted RBP23.66■■□□□ 1.38
AP002008.2-203ENST00000528953 RNMTO43148 476 aaKnown RBP23.65■■□□□ 1.38
AP002008.2-203ENST00000528953 NLGN1Q8N2Q7 840 aa23.65■■□□□ 1.38
AP002008.2-203ENST00000528953 COL5A3P25940 1745 aaPredicted RBP23.64■■□□□ 1.38
AP002008.2-203ENST00000528953 RFC4P35249 363 aa23.64■■□□□ 1.37
AP002008.2-203ENST00000528953 CRKLP46109 303 aaKnown RBP23.64■■□□□ 1.37
AP002008.2-203ENST00000528953 MRC1P22897 1456 aa23.63■■□□□ 1.37
AP002008.2-203ENST00000528953 SCN11AQ9UI33 1791 aa23.63■■□□□ 1.37
AP002008.2-203ENST00000528953 U2SURPO15042 1029 aaKnown RBP23.63■■□□□ 1.37
AP002008.2-203ENST00000528953 GYS1P13807 737 aa23.61■■□□□ 1.37
AP002008.2-203ENST00000528953 SLC39A6Q13433 755 aa23.59■■□□□ 1.37
AP002008.2-203ENST00000528953 CICQ96RK0 1608 aaPredicted RBP23.59■■□□□ 1.37
AP002008.2-203ENST00000528953 MYH14Q7Z406 1995 aaKnown RBP23.58■■□□□ 1.37
AP002008.2-203ENST00000528953 DNAJC10Q8IXB1 793 aa23.58■■□□□ 1.37
AP002008.2-203ENST00000528953 CFAP53Q96M91 514 aa23.58■■□□□ 1.37
AP002008.2-203ENST00000528953 TJP1Q07157 1748 aa23.57■■□□□ 1.36
AP002008.2-203ENST00000528953 INTS5Q6P9B9 1019 aaKnown RBP23.57■■□□□ 1.36
AP002008.2-203ENST00000528953 GAS2L2Q8NHY3 880 aa23.57■■□□□ 1.36
AP002008.2-203ENST00000528953 WWC3Q9ULE0 1092 aa23.57■■□□□ 1.36
AP002008.2-203ENST00000528953 CCDC87Q9NVE4 849 aa23.56■■□□□ 1.36
AP002008.2-203ENST00000528953 PARP3Q9Y6F1 533 aa23.56■■□□□ 1.36
AP002008.2-203ENST00000528953 ADAMTS7Q9UKP4 1686 aa23.56■■□□□ 1.36
AP002008.2-203ENST00000528953 SRP68Q9UHB9 627 aaKnown RBP23.55■■□□□ 1.36
AP002008.2-203ENST00000528953 C10orf71Q711Q0 1435 aa23.55■■□□□ 1.36
AP002008.2-203ENST00000528953 USP42Q9H9J4 1324 aaKnown RBP23.55■■□□□ 1.36
AP002008.2-203ENST00000528953 TGFB2P61812 414 aa23.54■■□□□ 1.36
AP002008.2-203ENST00000528953 KCPQ6ZWJ8 1503 aa23.54■■□□□ 1.36
AP002008.2-203ENST00000528953 GNAT3A8MTJ3 354 aa23.53■■□□□ 1.36
AP002008.2-203ENST00000528953 CYP19A1P11511 503 aaPredicted RBP23.53■■□□□ 1.36
AP002008.2-203ENST00000528953 VSIG10Q8N0Z9 540 aa23.53■■□□□ 1.36
AP002008.2-203ENST00000528953 PXDNLA1KZ92 1463 aa23.53■■□□□ 1.36
AP002008.2-203ENST00000528953 C4AP0C0L4 1744 aa23.53■■□□□ 1.36
AP002008.2-203ENST00000528953 PPP2R1AP30153 589 aa23.52■■□□□ 1.36
AP002008.2-203ENST00000528953 FKBP8Q14318 412 aa23.52■■□□□ 1.36
AP002008.2-203ENST00000528953 IL17REQ8NFR9 667 aa23.52■■□□□ 1.36
AP002008.2-203ENST00000528953 NUDCQ9Y266 331 aa23.52■■□□□ 1.36
AP002008.2-203ENST00000528953 SOS1Q07889 1333 aaPredicted RBP23.52■■□□□ 1.36
AP002008.2-203ENST00000528953 PRKAR2BP31323 418 aa23.51■■□□□ 1.35
AP002008.2-203ENST00000528953 TEFQ10587 303 aa23.51■■□□□ 1.35
AP002008.2-203ENST00000528953 TTC5Q8N0Z6 440 aa23.51■■□□□ 1.35
AP002008.2-203ENST00000528953 RSPH6AQ9H0K4 717 aa23.5■■□□□ 1.35
AP002008.2-203ENST00000528953 A0A0G2JLW4 131 aa23.49■■□□□ 1.35
AP002008.2-203ENST00000528953 ZPR1O75312 459 aa23.49■■□□□ 1.35
AP002008.2-203ENST00000528953 PHACTR3Q96KR7 559 aa23.49■■□□□ 1.35
AP002008.2-203ENST00000528953 ZBTB1Q9Y2K1 713 aa23.49■■□□□ 1.35
AP002008.2-203ENST00000528953 KIF13BQ9NQT8 1826 aa23.48■■□□□ 1.35
AP002008.2-203ENST00000528953 GIGYF1O75420 1035 aaPredicted RBP23.48■■□□□ 1.35
AP002008.2-203ENST00000528953 C1QTNF8P60827 252 aa23.48■■□□□ 1.35
AP002008.2-203ENST00000528953 ATP10DQ9P241 1426 aa23.48■■□□□ 1.35
AP002008.2-203ENST00000528953 DPEP1P16444 411 aa23.47■■□□□ 1.35
AP002008.2-203ENST00000528953 DDR1Q08345 913 aa23.47■■□□□ 1.35
AP002008.2-203ENST00000528953 ADCY9O60503 1353 aa23.46■■□□□ 1.35
AP002008.2-203ENST00000528953 U2AF1L5P0DN76 240 aaPredicted RBP23.46■■□□□ 1.35
AP002008.2-203ENST00000528953 COL15A1P39059 1388 aa23.46■■□□□ 1.35
AP002008.2-203ENST00000528953 U2AF1Q01081 240 aaKnown RBP eCLIP23.46■■□□□ 1.35
AP002008.2-203ENST00000528953 USPL1Q5W0Q7 1092 aa23.46■■□□□ 1.35
AP002008.2-203ENST00000528953 VIRMAQ69YN4 1812 aaKnown RBP23.46■■□□□ 1.35
AP002008.2-203ENST00000528953 ZNF790Q6PG37 636 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms