RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 AMOTQ4VCS5 1084 aa9.79□□□□□ -0.84
SOX6-211ENST00000528429 PHRF1Q9P1Y6 1649 aaKnown RBP9.78□□□□□ -0.84
SOX6-211ENST00000528429 CENPQQ7L2Z9 268 aaPredicted RBP9.78□□□□□ -0.84
SOX6-211ENST00000528429 STRN4Q9NRL3 753 aa9.78□□□□□ -0.84
SOX6-211ENST00000528429 TATP17735 454 aaPredicted RBP9.78□□□□□ -0.84
SOX6-211ENST00000528429 AKAP4Q5JQC9 854 aa9.78□□□□□ -0.84
SOX6-211ENST00000528429 TOM1L2Q6ZVM7 507 aa9.77□□□□□ -0.85
SOX6-211ENST00000528429 RGPD5Q99666 1765 aa9.77□□□□□ -0.85
SOX6-211ENST00000528429 CPDO75976 1380 aa9.77□□□□□ -0.85
SOX6-211ENST00000528429 PIP4K2BP78356 416 aa9.77□□□□□ -0.85
SOX6-211ENST00000528429 DDX19BQ9UMR2 479 aa9.77□□□□□ -0.85
SOX6-211ENST00000528429 PCDHB15Q9Y5E8 787 aa9.77□□□□□ -0.85
SOX6-211ENST00000528429 KDM2BQ8NHM5 1336 aa9.76□□□□□ -0.85
SOX6-211ENST00000528429 IGHDP01880 384 aa9.76□□□□□ -0.85
SOX6-211ENST00000528429 SLC4A2P04920 1241 aa9.76□□□□□ -0.85
SOX6-211ENST00000528429 CNPY4Q8N129 248 aa9.76□□□□□ -0.85
SOX6-211ENST00000528429 USP35Q9P2H5 1018 aa9.76□□□□□ -0.85
SOX6-211ENST00000528429 RNMTO43148 476 aaKnown RBP9.75□□□□□ -0.85
SOX6-211ENST00000528429 BRPF1P55201 1214 aaPredicted RBP9.75□□□□□ -0.85
SOX6-211ENST00000528429 EVA1CP58658 441 aa9.75□□□□□ -0.85
SOX6-211ENST00000528429 BTBD11A6QL63 1104 aa9.75□□□□□ -0.85
SOX6-211ENST00000528429 MSH5O43196 834 aa9.75□□□□□ -0.85
SOX6-211ENST00000528429 STK31Q9BXU1 1019 aa9.75□□□□□ -0.85
SOX6-211ENST00000528429 SPG7Q9UQ90 795 aa9.75□□□□□ -0.85
SOX6-211ENST00000528429 CEMIPQ8WUJ3 1361 aa9.75□□□□□ -0.85
SOX6-211ENST00000528429 NCAPD2Q15021 1401 aa9.74□□□□□ -0.85
SOX6-211ENST00000528429 KCNQ3O43525 872 aa9.74□□□□□ -0.85
SOX6-211ENST00000528429 RGS3P49796 1198 aa9.74□□□□□ -0.85
SOX6-211ENST00000528429 SECISBP2LQ93073 1101 aaKnown RBP9.74□□□□□ -0.85
SOX6-211ENST00000528429 API5Q9BZZ5 524 aaKnown RBP9.74□□□□□ -0.85
SOX6-211ENST00000528429 MEGF6O75095 1541 aa9.74□□□□□ -0.85
SOX6-211ENST00000528429 EIF2S2P20042 333 aaKnown RBP9.74□□□□□ -0.85
SOX6-211ENST00000528429 ARHGAP45Q92619 1136 aa9.74□□□□□ -0.85
SOX6-211ENST00000528429 CCDC9Q9Y3X0 531 aaKnown RBP9.74□□□□□ -0.85
SOX6-211ENST00000528429 G2E3Q7L622 706 aa9.73□□□□□ -0.85
SOX6-211ENST00000528429 WDR17Q8IZU2 1322 aa9.73□□□□□ -0.85
SOX6-211ENST00000528429 HDGFL1Q5TGJ6 251 aa9.73□□□□□ -0.85
SOX6-211ENST00000528429 LARP1Q6PKG0 1096 aaKnown RBP9.73□□□□□ -0.85
SOX6-211ENST00000528429 CAMTA1Q9Y6Y1 1673 aa9.73□□□□□ -0.85
SOX6-211ENST00000528429 CCDC30Q5VVM6 783 aa9.72□□□□□ -0.85
SOX6-211ENST00000528429 SLC4A10Q6U841 1118 aa9.72□□□□□ -0.85
SOX6-211ENST00000528429 BBXQ8WY36 941 aaPredicted RBP9.72□□□□□ -0.85
SOX6-211ENST00000528429 C1orf115Q9H7X2 142 aa9.72□□□□□ -0.85
SOX6-211ENST00000528429 COL18A1P39060 1754 aa9.72□□□□□ -0.85
SOX6-211ENST00000528429 LTBP4Q8N2S1 1624 aa9.72□□□□□ -0.85
SOX6-211ENST00000528429 ABCC4O15439 1325 aa9.72□□□□□ -0.85
SOX6-211ENST00000528429 PHKG2P15735 406 aa9.72□□□□□ -0.85
SOX6-211ENST00000528429 IFNL2Q8IZJ0 200 aa9.72□□□□□ -0.85
SOX6-211ENST00000528429 ZBTB40Q9NUA8 1239 aa9.72□□□□□ -0.85
SOX6-211ENST00000528429 BABAM1Q9NWV8 329 aa9.72□□□□□ -0.85
SOX6-211ENST00000528429 BTG4Q9NY30 223 aa9.72□□□□□ -0.85
SOX6-211ENST00000528429 CRYBG1Q9Y4K1 1723 aa9.72□□□□□ -0.85
SOX6-211ENST00000528429 LRRC37A3O60309 1634 aa9.72□□□□□ -0.85
SOX6-211ENST00000528429 F6X3S4 739 aa9.71□□□□□ -0.85
SOX6-211ENST00000528429 CYP27B1O15528 508 aa9.71□□□□□ -0.85
SOX6-211ENST00000528429 EIF4A1P60842 406 aaKnown RBP9.71□□□□□ -0.85
SOX6-211ENST00000528429 TMED8Q6PL24 325 aaPredicted RBP9.71□□□□□ -0.85
SOX6-211ENST00000528429 RWDD1Q9H446 243 aaPredicted RBP9.71□□□□□ -0.85
SOX6-211ENST00000528429 ROBO1Q9Y6N7 1651 aa9.71□□□□□ -0.85
SOX6-211ENST00000528429 NHSL1Q5SYE7 1610 aa9.71□□□□□ -0.85
SOX6-211ENST00000528429 COL5A2P05997 1499 aaPredicted RBP9.71□□□□□ -0.85
SOX6-211ENST00000528429 ADAMTS2O95450 1211 aa9.71□□□□□ -0.86
SOX6-211ENST00000528429 SLC39A6Q13433 755 aa9.71□□□□□ -0.86
SOX6-211ENST00000528429 FKBP5Q13451 457 aaPredicted RBP9.71□□□□□ -0.86
SOX6-211ENST00000528429 NFATC2IPQ8NCF5 419 aa9.7□□□□□ -0.86
SOX6-211ENST00000528429 DDX54Q8TDD1 881 aaKnown RBP9.7□□□□□ -0.86
SOX6-211ENST00000528429 PTPRCP08575 1304 aa9.7□□□□□ -0.86
SOX6-211ENST00000528429 NUTM2BA6NNL0 878 aaPredicted RBP9.7□□□□□ -0.86
SOX6-211ENST00000528429 NUTM2EB1AL46 878 aaPredicted RBP9.7□□□□□ -0.86
SOX6-211ENST00000528429 ZBTB7BO15156 539 aaPredicted RBP9.7□□□□□ -0.86
SOX6-211ENST00000528429 TOM1O60784 492 aa9.7□□□□□ -0.86
SOX6-211ENST00000528429 NUTM2AQ8IVF1 878 aaPredicted RBP9.7□□□□□ -0.86
SOX6-211ENST00000528429 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.7□□□□□ -0.86
SOX6-211ENST00000528429 UBAP1LF5GYI3 381 aa9.69□□□□□ -0.86
SOX6-211ENST00000528429 ANXA1P04083 346 aa9.69□□□□□ -0.86
SOX6-211ENST00000528429 IL2RBP14784 551 aa9.69□□□□□ -0.86
SOX6-211ENST00000528429 FLIIQ13045 1269 aa9.69□□□□□ -0.86
SOX6-211ENST00000528429 ZCRB1Q8TBF4 217 aaKnown RBP9.69□□□□□ -0.86
SOX6-211ENST00000528429 LMO7Q8WWI1 1683 aa9.69□□□□□ -0.86
SOX6-211ENST00000528429 ABCC6O95255 1503 aa9.69□□□□□ -0.86
SOX6-211ENST00000528429 CARD10Q9BWT7 1032 aa9.69□□□□□ -0.86
SOX6-211ENST00000528429 SLC52A2Q9HAB3 445 aa9.69□□□□□ -0.86
SOX6-211ENST00000528429 FAM208AQ9UK61 1670 aaKnown RBP9.69□□□□□ -0.86
SOX6-211ENST00000528429 PRAMEF22A3QJZ6 481 aa9.69□□□□□ -0.86
SOX6-211ENST00000528429 DCAF5Q96JK2 942 aa9.69□□□□□ -0.86
SOX6-211ENST00000528429 CHPF2Q9P2E5 772 aa9.69□□□□□ -0.86
SOX6-211ENST00000528429 KDM6AO15550 1401 aaPredicted RBP9.68□□□□□ -0.86
SOX6-211ENST00000528429 IPO4Q8TEX9 1081 aaKnown RBP9.68□□□□□ -0.86
SOX6-211ENST00000528429 ZNF592Q92610 1267 aa9.68□□□□□ -0.86
SOX6-211ENST00000528429 PHAXQ9H814 394 aaKnown RBP9.68□□□□□ -0.86
SOX6-211ENST00000528429 OVOS2A0A0G2JMS6 1433 aa9.68□□□□□ -0.86
SOX6-211ENST00000528429 RGS12O14924 1447 aa9.68□□□□□ -0.86
SOX6-211ENST00000528429 CABP4P57796 275 aa9.68□□□□□ -0.86
SOX6-211ENST00000528429 INTS3Q68E01 1043 aaKnown RBP9.68□□□□□ -0.86
SOX6-211ENST00000528429 PDZRN3Q9UPQ7 1066 aa9.68□□□□□ -0.86
SOX6-211ENST00000528429 HSP90AB1P08238 724 aaKnown RBP9.67□□□□□ -0.86
SOX6-211ENST00000528429 ZNF790Q6PG37 636 aa9.67□□□□□ -0.86
SOX6-211ENST00000528429 KCNG1Q9UIX4 513 aa9.67□□□□□ -0.86
SOX6-211ENST00000528429 SOS1Q07889 1333 aaPredicted RBP9.67□□□□□ -0.86
SOX6-211ENST00000528429 PCDH11XQ9BZA7 1347 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms