RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 HSP90AB1P08238 724 aaKnown RBP35.35■■■■□ 3.25
TRIM3-206ENST00000528227 DCAF5Q96JK2 942 aa35.35■■■■□ 3.25
TRIM3-206ENST00000528227 AMOTQ4VCS5 1084 aa35.33■■■■□ 3.25
TRIM3-206ENST00000528227 AEBP1Q8IUX7 1158 aa35.33■■■■□ 3.25
TRIM3-206ENST00000528227 CD2APQ9Y5K6 639 aa35.33■■■■□ 3.25
TRIM3-206ENST00000528227 KDRP35968 1356 aa35.33■■■■□ 3.25
TRIM3-206ENST00000528227 KIF7Q2M1P5 1343 aa35.32■■■■□ 3.25
TRIM3-206ENST00000528227 KDM6AO15550 1401 aaPredicted RBP35.32■■■■□ 3.25
TRIM3-206ENST00000528227 ZNF530Q6P9A1 599 aaPredicted RBP35.32■■■■□ 3.24
TRIM3-206ENST00000528227 YBX3P16989 372 aaKnown RBP eCLIP35.31■■■■□ 3.24
TRIM3-206ENST00000528227 AMER1Q5JTC6 1135 aaPredicted RBP35.31■■■■□ 3.24
TRIM3-206ENST00000528227 ZNF831Q5JPB2 1677 aa35.3■■■■□ 3.24
TRIM3-206ENST00000528227 GNPATO15228 680 aa35.3■■■■□ 3.24
TRIM3-206ENST00000528227 GOLGB1Q14789 3259 aaKnown RBP35.28■■■■□ 3.24
TRIM3-206ENST00000528227 IL13P35225 146 aa35.27■■■■□ 3.24
TRIM3-206ENST00000528227 SULT6B1Q6IMI4 303 aa35.27■■■■□ 3.24
TRIM3-206ENST00000528227 GRIN3BO60391 1043 aa35.26■■■■□ 3.24
TRIM3-206ENST00000528227 SLC4A9Q96Q91 983 aa35.26■■■■□ 3.24
TRIM3-206ENST00000528227 CABP4P57796 275 aa35.24■■■■□ 3.23
TRIM3-206ENST00000528227 COL5A3P25940 1745 aaPredicted RBP35.23■■■■□ 3.23
TRIM3-206ENST00000528227 MTHFSP49914 203 aa35.23■■■■□ 3.23
TRIM3-206ENST00000528227 C1orf141Q5JVX7 400 aa35.23■■■■□ 3.23
TRIM3-206ENST00000528227 RBM42Q9BTD8 480 aaKnown RBP35.23■■■■□ 3.23
TRIM3-206ENST00000528227 PER1O15534 1290 aaPredicted RBP35.18■■■■□ 3.22
TRIM3-206ENST00000528227 RTCBQ9Y3I0 505 aaKnown RBP35.18■■■■□ 3.22
TRIM3-206ENST00000528227 RC3H1Q5TC82 1133 aaKnown RBP35.17■■■■□ 3.22
TRIM3-206ENST00000528227 CNTNAP4Q9C0A0 1308 aa35.16■■■■□ 3.22
TRIM3-206ENST00000528227 SCN11AQ9UI33 1791 aa35.15■■■■□ 3.22
TRIM3-206ENST00000528227 TRAPPC3LQ5T215 181 aa35.15■■■■□ 3.22
TRIM3-206ENST00000528227 NFATC2IPQ8NCF5 419 aa35.15■■■■□ 3.22
TRIM3-206ENST00000528227 ADRA2BP18089 450 aa35.12■■■■□ 3.21
TRIM3-206ENST00000528227 PTCD1O75127 700 aaKnown RBP35.11■■■■□ 3.21
TRIM3-206ENST00000528227 MMP10P09238 476 aa35.11■■■■□ 3.21
TRIM3-206ENST00000528227 ARHGEF1Q92888 912 aaKnown RBP35.11■■■■□ 3.21
TRIM3-206ENST00000528227 RPS6KA4O75676 772 aa35.1■■■■□ 3.21
TRIM3-206ENST00000528227 AKAP4Q5JQC9 854 aa35.1■■■■□ 3.21
TRIM3-206ENST00000528227 CC2D1BQ5T0F9 858 aaKnown RBP35.1■■■■□ 3.21
TRIM3-206ENST00000528227 MYH14Q7Z406 1995 aaKnown RBP35.1■■■■□ 3.21
TRIM3-206ENST00000528227 CICQ96RK0 1608 aaPredicted RBP35.1■■■■□ 3.21
TRIM3-206ENST00000528227 C1QTNF8P60827 252 aa35.08■■■■□ 3.21
TRIM3-206ENST00000528227 NLGN1Q8N2Q7 840 aa35.08■■■■□ 3.21
TRIM3-206ENST00000528227 TJP1Q07157 1748 aa35.08■■■■□ 3.21
TRIM3-206ENST00000528227 C4AP0C0L4 1744 aa35.07■■■■□ 3.2
TRIM3-206ENST00000528227 KIF13BQ9NQT8 1826 aa35.07■■■■□ 3.2
TRIM3-206ENST00000528227 HMOX1P09601 288 aa35.07■■■■□ 3.2
TRIM3-206ENST00000528227 RFC4P35249 363 aa35.05■■■■□ 3.2
TRIM3-206ENST00000528227 WWC3Q9ULE0 1092 aa35.05■■■■□ 3.2
TRIM3-206ENST00000528227 DIAPH1O60610 1272 aaKnown RBP35.04■■■■□ 3.2
TRIM3-206ENST00000528227 GYS1P13807 737 aa35.04■■■■□ 3.2
TRIM3-206ENST00000528227 MRC1P22897 1456 aa35.03■■■■□ 3.2
TRIM3-206ENST00000528227 NPC1L1Q9UHC9 1359 aa35.03■■■■□ 3.2
TRIM3-206ENST00000528227 GIGYF1O75420 1035 aaPredicted RBP35.03■■■■□ 3.2
TRIM3-206ENST00000528227 CRKLP46109 303 aaKnown RBP35.03■■■■□ 3.2
TRIM3-206ENST00000528227 SLC52A2Q9HAB3 445 aa35.03■■■■□ 3.2
TRIM3-206ENST00000528227 LGR6Q9HBX8 967 aa35.03■■■■□ 3.2
TRIM3-206ENST00000528227 KIAA1551Q9HCM1 1747 aa35.03■■■■□ 3.2
TRIM3-206ENST00000528227 VIRMAQ69YN4 1812 aaKnown RBP35.02■■■■□ 3.2
TRIM3-206ENST00000528227 PXDNLA1KZ92 1463 aa35.01■■■■□ 3.19
TRIM3-206ENST00000528227 C10orf71Q711Q0 1435 aa35■■■■□ 3.19
TRIM3-206ENST00000528227 ATP10DQ9P241 1426 aa35■■■■□ 3.19
TRIM3-206ENST00000528227 ADAMTS7Q9UKP4 1686 aa34.99■■■■□ 3.19
TRIM3-206ENST00000528227 RNMTO43148 476 aaKnown RBP34.99■■■■□ 3.19
TRIM3-206ENST00000528227 MTHFSDQ2M296 383 aaKnown RBP34.99■■■■□ 3.19
TRIM3-206ENST00000528227 COL3A1P02461 1466 aaPredicted RBP34.98■■■■□ 3.19
TRIM3-206ENST00000528227 ADCY9O60503 1353 aa34.98■■■■□ 3.19
TRIM3-206ENST00000528227 N4BP2Q86UW6 1770 aaPredicted RBP34.97■■■■□ 3.19
TRIM3-206ENST00000528227 TGFB2P61812 414 aa34.96■■■■□ 3.19
TRIM3-206ENST00000528227 INTS5Q6P9B9 1019 aaKnown RBP34.95■■■■□ 3.19
TRIM3-206ENST00000528227 CCDC87Q9NVE4 849 aa34.95■■■■□ 3.19
TRIM3-206ENST00000528227 PARP3Q9Y6F1 533 aa34.94■■■■□ 3.18
TRIM3-206ENST00000528227 USP42Q9H9J4 1324 aaKnown RBP34.93■■■■□ 3.18
TRIM3-206ENST00000528227 SENP3-EIF4A1A0A087X0R7 540 aa34.93■■■■□ 3.18
TRIM3-206ENST00000528227 DNAJC10Q8IXB1 793 aa34.93■■■■□ 3.18
TRIM3-206ENST00000528227 SRP68Q9UHB9 627 aaKnown RBP34.93■■■■□ 3.18
TRIM3-206ENST00000528227 KCPQ6ZWJ8 1503 aa34.92■■■■□ 3.18
TRIM3-206ENST00000528227 SLC39A6Q13433 755 aa34.92■■■■□ 3.18
TRIM3-206ENST00000528227 CNGB1Q14028 1251 aaPredicted RBP34.92■■■■□ 3.18
TRIM3-206ENST00000528227 A0A0G2JLW4 131 aa34.9■■■■□ 3.18
TRIM3-206ENST00000528227 FKBP8Q14318 412 aa34.89■■■■□ 3.18
TRIM3-206ENST00000528227 CYP19A1P11511 503 aaPredicted RBP34.87■■■■□ 3.17
TRIM3-206ENST00000528227 U2SURPO15042 1029 aaKnown RBP34.86■■■■□ 3.17
TRIM3-206ENST00000528227 DPEP1P16444 411 aa34.86■■■■□ 3.17
TRIM3-206ENST00000528227 GPBP1L1Q9HC44 474 aaPredicted RBP34.86■■■■□ 3.17
TRIM3-206ENST00000528227 UBR2Q8IWV8 1755 aa34.86■■■■□ 3.17
TRIM3-206ENST00000528227 BRCA1P38398 1863 aaKnown RBP34.86■■■■□ 3.17
TRIM3-206ENST00000528227 SOS1Q07889 1333 aaPredicted RBP34.85■■■■□ 3.17
TRIM3-206ENST00000528227 BCS1LQ9Y276 419 aa34.85■■■■□ 3.17
TRIM3-206ENST00000528227 DDR1Q08345 913 aa34.84■■■■□ 3.17
TRIM3-206ENST00000528227 VSIG10Q8N0Z9 540 aa34.82■■■■□ 3.16
TRIM3-206ENST00000528227 ZNF526Q8TF50 670 aaPredicted RBP34.81■■■■□ 3.16
TRIM3-206ENST00000528227 ZPR1O75312 459 aa34.8■■■■□ 3.16
TRIM3-206ENST00000528227 KCNA3P22001 575 aa34.8■■■■□ 3.16
TRIM3-206ENST00000528227 USPL1Q5W0Q7 1092 aa34.8■■■■□ 3.16
TRIM3-206ENST00000528227 GAS2L2Q8NHY3 880 aa34.8■■■■□ 3.16
TRIM3-206ENST00000528227 TM4SF1P30408 202 aa34.79■■■■□ 3.16
TRIM3-206ENST00000528227 ZBTB1Q9Y2K1 713 aa34.79■■■■□ 3.16
TRIM3-206ENST00000528227 COL15A1P39059 1388 aa34.78■■■■□ 3.16
TRIM3-206ENST00000528227 GNAT3A8MTJ3 354 aa34.78■■■■□ 3.16
TRIM3-206ENST00000528227 POLRMTO00411 1230 aaKnown RBP34.78■■■■□ 3.16
TRIM3-206ENST00000528227 FCHSD2O94868 740 aa34.77■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms