RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 MCCD1P59942 119 aaPredicted RBP6.98□□□□□ -1.29
CLNS1A-209ENST00000527299 GOLGA6L1Q8N7Z2 621 aa6.98□□□□□ -1.29
CLNS1A-209ENST00000527299 GJD4Q96KN9 370 aaPredicted RBP6.98□□□□□ -1.29
CLNS1A-209ENST00000527299 ESYT1Q9BSJ8 1104 aa6.98□□□□□ -1.29
CLNS1A-209ENST00000527299 RRAGCQ9HB90 399 aa6.98□□□□□ -1.29
CLNS1A-209ENST00000527299 GNRH1P01148 92 aa6.97□□□□□ -1.29
CLNS1A-209ENST00000527299 CENPCQ03188 943 aa6.97□□□□□ -1.29
CLNS1A-209ENST00000527299 LBRQ14739 615 aaKnown RBP6.97□□□□□ -1.29
CLNS1A-209ENST00000527299 SUV39H2Q9H5I1 410 aa6.97□□□□□ -1.29
CLNS1A-209ENST00000527299 GPAMQ9HCL2 828 aa6.97□□□□□ -1.29
CLNS1A-209ENST00000527299 HRH3Q9Y5N1 445 aa6.97□□□□□ -1.29
CLNS1A-209ENST00000527299 A0A1B0GTH6 734 aa6.96□□□□□ -1.3
CLNS1A-209ENST00000527299 IL2RAP01589 272 aa6.96□□□□□ -1.3
CLNS1A-209ENST00000527299 GRIN2CQ14957 1233 aa6.96□□□□□ -1.3
CLNS1A-209ENST00000527299 TMEM259Q4ZIN3 620 aa6.96□□□□□ -1.3
CLNS1A-209ENST00000527299 CNKSR1Q969H4 720 aa6.96□□□□□ -1.3
CLNS1A-209ENST00000527299 RAB6BQ9NRW1 208 aa6.96□□□□□ -1.3
CLNS1A-209ENST00000527299 PCDHB11Q9Y5F2 797 aa6.96□□□□□ -1.3
CLNS1A-209ENST00000527299 C2CD2LO14523 706 aa6.95□□□□□ -1.3
CLNS1A-209ENST00000527299 PHKA2P46019 1235 aa6.95□□□□□ -1.3
CLNS1A-209ENST00000527299 NDFIP2Q9NV92 336 aa6.95□□□□□ -1.3
CLNS1A-209ENST00000527299 ATXN7L1Q9ULK2 861 aaPredicted RBP6.95□□□□□ -1.3
CLNS1A-209ENST00000527299 C1QTNF9BB2RNN3 333 aa6.94□□□□□ -1.3
CLNS1A-209ENST00000527299 NR1H3Q13133 447 aa6.94□□□□□ -1.3
CLNS1A-209ENST00000527299 SLCO4C1Q6ZQN7 724 aa6.94□□□□□ -1.3
CLNS1A-209ENST00000527299 ZNF592Q92610 1267 aa6.94□□□□□ -1.3
CLNS1A-209ENST00000527299 PSMG3-AS1Q96PY0 264 aa6.94□□□□□ -1.3
CLNS1A-209ENST00000527299 ZSCAN10Q96SZ4 725 aaPredicted RBP6.94□□□□□ -1.3
CLNS1A-209ENST00000527299 FHDC1Q9C0D6 1143 aaPredicted RBP6.94□□□□□ -1.3
CLNS1A-209ENST00000527299 PIK3R2O00459 728 aa6.93□□□□□ -1.3
CLNS1A-209ENST00000527299 GNB5O14775 395 aa6.93□□□□□ -1.3
CLNS1A-209ENST00000527299 BMP4P12644 408 aa6.93□□□□□ -1.3
CLNS1A-209ENST00000527299 CD163Q86VB7 1156 aa6.93□□□□□ -1.3
CLNS1A-209ENST00000527299 XAGE2Q96GT9 111 aa6.93□□□□□ -1.3
CLNS1A-209ENST00000527299 ESF1Q9H501 851 aaKnown RBP6.93□□□□□ -1.3
CLNS1A-209ENST00000527299 GOPCQ9HD26 462 aa6.93□□□□□ -1.3
CLNS1A-209ENST00000527299 GGA1Q9UJY5 639 aa6.93□□□□□ -1.3
CLNS1A-209ENST00000527299 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.92□□□□□ -1.3
CLNS1A-209ENST00000527299 BNIP3LO60238 219 aa6.92□□□□□ -1.3
CLNS1A-209ENST00000527299 CSB-PGBD3P0DP91 1061 aa6.92□□□□□ -1.3
CLNS1A-209ENST00000527299 FGFR3P22607 806 aa6.92□□□□□ -1.3
CLNS1A-209ENST00000527299 AMPD1P23109 780 aa6.92□□□□□ -1.3
CLNS1A-209ENST00000527299 ITGB7P26010 798 aa6.92□□□□□ -1.3
CLNS1A-209ENST00000527299 MSX1P28360 303 aa6.92□□□□□ -1.3
CLNS1A-209ENST00000527299 CTBSQ01459 385 aa6.92□□□□□ -1.3
CLNS1A-209ENST00000527299 PGBD3Q8N328 593 aa6.92□□□□□ -1.3
CLNS1A-209ENST00000527299 ABHD17AQ96GS6 310 aa6.92□□□□□ -1.3
CLNS1A-209ENST00000527299 BTBD6Q96KE9 485 aa6.92□□□□□ -1.3
CLNS1A-209ENST00000527299 KRTAP9-2Q9BYQ4 174 aa6.92□□□□□ -1.3
CLNS1A-209ENST00000527299 RUBCNLQ9H714 662 aa6.92□□□□□ -1.3
CLNS1A-209ENST00000527299 EPXP11678 715 aa6.91□□□□□ -1.3
CLNS1A-209ENST00000527299 DGKGP49619 791 aa6.91□□□□□ -1.3
CLNS1A-209ENST00000527299 C4orf17Q53FE4 359 aa6.91□□□□□ -1.3
CLNS1A-209ENST00000527299 EFHC2Q5JST6 749 aa6.91□□□□□ -1.3
CLNS1A-209ENST00000527299 GNASQ5JWF2 1037 aa6.91□□□□□ -1.3
CLNS1A-209ENST00000527299 ZNF330Q9Y3S2 320 aaPredicted RBP6.91□□□□□ -1.3
CLNS1A-209ENST00000527299 CHRNA4P43681 627 aa6.9□□□□□ -1.3
CLNS1A-209ENST00000527299 TMEM214Q6NUQ4 689 aaKnown RBP6.9□□□□□ -1.3
CLNS1A-209ENST00000527299 CRISPLD1Q9H336 500 aa6.9□□□□□ -1.3
CLNS1A-209ENST00000527299 GPR37L1O60883 481 aa6.89□□□□□ -1.31
CLNS1A-209ENST00000527299 ARAFP10398 606 aa6.89□□□□□ -1.31
CLNS1A-209ENST00000527299 GTF2E1P29083 439 aaPredicted RBP6.89□□□□□ -1.31
CLNS1A-209ENST00000527299 RNF135Q8IUD6 432 aa6.89□□□□□ -1.31
CLNS1A-209ENST00000527299 CDCA7Q9BWT1 371 aaPredicted RBP6.89□□□□□ -1.31
CLNS1A-209ENST00000527299 NOP53Q9NZM5 478 aaKnown RBP6.89□□□□□ -1.31
CLNS1A-209ENST00000527299 KRTAP9-6A0A140TA67 174 aa6.88□□□□□ -1.31
CLNS1A-209ENST00000527299 PCMTD1Q96MG8 357 aaPredicted RBP6.88□□□□□ -1.31
CLNS1A-209ENST00000527299 MYCP01106 439 aaPredicted RBP6.87□□□□□ -1.31
CLNS1A-209ENST00000527299 ESCO1Q5FWF5 840 aa6.87□□□□□ -1.31
CLNS1A-209ENST00000527299 PPARGC1BQ86YN6 1023 aaKnown RBP6.87□□□□□ -1.31
CLNS1A-209ENST00000527299 RHBDD1Q8TEB9 315 aa6.87□□□□□ -1.31
CLNS1A-209ENST00000527299 CCDC85AQ96PX6 553 aaPredicted RBP6.87□□□□□ -1.31
CLNS1A-209ENST00000527299 DNAAF2Q9NVR5 837 aaKnown RBP6.87□□□□□ -1.31
CLNS1A-209ENST00000527299 NEURL1BA8MQ27 555 aa6.86□□□□□ -1.31
CLNS1A-209ENST00000527299 SEMA6BQ9H3T3 888 aa6.86□□□□□ -1.31
CLNS1A-209ENST00000527299 CEP126Q9P2H0 1117 aa6.86□□□□□ -1.31
CLNS1A-209ENST00000527299 SOCS7O14512 581 aa6.85□□□□□ -1.31
CLNS1A-209ENST00000527299 FIGNL1Q6PIW4 674 aa6.85□□□□□ -1.31
CLNS1A-209ENST00000527299 CHSY3Q70JA7 882 aa6.85□□□□□ -1.31
CLNS1A-209ENST00000527299 ZCCHC2Q9C0B9 1178 aaKnown RBP6.85□□□□□ -1.31
CLNS1A-209ENST00000527299 PCDHGC4Q9Y5F7 938 aa6.85□□□□□ -1.31
CLNS1A-209ENST00000527299 DOC2BQ14184 412 aa6.84□□□□□ -1.31
CLNS1A-209ENST00000527299 ETNK1Q9HBU6 452 aa6.84□□□□□ -1.31
CLNS1A-209ENST00000527299 KLF15Q9UIH9 416 aa6.84□□□□□ -1.31
CLNS1A-209ENST00000527299 HCN2Q9UL51 889 aa6.84□□□□□ -1.31
CLNS1A-209ENST00000527299 FAM182BQ5T319 152 aa6.83□□□□□ -1.32
CLNS1A-209ENST00000527299 TBC1D9Q6ZT07 1266 aa6.83□□□□□ -1.32
CLNS1A-209ENST00000527299 NLRP8Q86W28 1048 aa6.83□□□□□ -1.32
CLNS1A-209ENST00000527299 AVENQ9NQS1 362 aaPredicted RBP6.83□□□□□ -1.32
CLNS1A-209ENST00000527299 NDUFB9Q9Y6M9 179 aa6.83□□□□□ -1.32
CLNS1A-209ENST00000527299 STAU1O95793 577 aaKnown RBP6.82□□□□□ -1.32
CLNS1A-209ENST00000527299 ATP4AP20648 1035 aa6.82□□□□□ -1.32
CLNS1A-209ENST00000527299 ADH6P28332 368 aa6.82□□□□□ -1.32
CLNS1A-209ENST00000527299 GATA4P43694 442 aa6.82□□□□□ -1.32
CLNS1A-209ENST00000527299 TLR1Q15399 786 aa6.82□□□□□ -1.32
CLNS1A-209ENST00000527299 ZMYM1Q5SVZ6 1142 aa6.82□□□□□ -1.32
CLNS1A-209ENST00000527299 FCHSD1Q86WN1 690 aa6.82□□□□□ -1.32
CLNS1A-209ENST00000527299 BANK1Q8NDB2 785 aa6.82□□□□□ -1.32
CLNS1A-209ENST00000527299 C1orf216Q8TAB5 229 aa6.82□□□□□ -1.32
CLNS1A-209ENST00000527299 ATXN7O15265 892 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms