RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 HOXB7P09629 217 aa26.23■■□□□ 1.79
SMCO4-203ENST00000526869 DZIP1LQ8IYY4 767 aaKnown RBP26.23■■□□□ 1.79
SMCO4-203ENST00000526869 NOB1Q9ULX3 412 aaKnown RBP26.23■■□□□ 1.79
SMCO4-203ENST00000526869 KRT24Q2M2I5 525 aa26.22■■□□□ 1.79
SMCO4-203ENST00000526869 B4GALNT3Q6L9W6 998 aa26.22■■□□□ 1.79
SMCO4-203ENST00000526869 PELP1Q8IZL8 1130 aaKnown RBP26.22■■□□□ 1.79
SMCO4-203ENST00000526869 PANK1Q8TE04 598 aa26.22■■□□□ 1.79
SMCO4-203ENST00000526869 FBXO41Q8TF61 875 aa26.22■■□□□ 1.79
SMCO4-203ENST00000526869 CHMP4AQ9BY43 222 aa26.22■■□□□ 1.79
SMCO4-203ENST00000526869 SPATA31A6Q5VVP1 1343 aa26.21■■□□□ 1.79
SMCO4-203ENST00000526869 BTBD11A6QL63 1104 aa26.21■■□□□ 1.79
SMCO4-203ENST00000526869 ADAMTS2O95450 1211 aa26.21■■□□□ 1.79
SMCO4-203ENST00000526869 TRIM27P14373 513 aa26.21■■□□□ 1.79
SMCO4-203ENST00000526869 NKX1-1Q15270 411 aaPredicted RBP26.2■■□□□ 1.78
SMCO4-203ENST00000526869 FTSJ3Q8IY81 847 aaKnown RBP26.2■■□□□ 1.78
SMCO4-203ENST00000526869 SLC52A2Q9HAB3 445 aa26.2■■□□□ 1.78
SMCO4-203ENST00000526869 RLBP1P12271 317 aa26.19■■□□□ 1.78
SMCO4-203ENST00000526869 EIF4A1P60842 406 aaKnown RBP26.19■■□□□ 1.78
SMCO4-203ENST00000526869 NUTM2BA6NNL0 878 aaPredicted RBP26.18■■□□□ 1.78
SMCO4-203ENST00000526869 NUTM2EB1AL46 878 aaPredicted RBP26.18■■□□□ 1.78
SMCO4-203ENST00000526869 NUTM2AQ8IVF1 878 aaPredicted RBP26.18■■□□□ 1.78
SMCO4-203ENST00000526869 API5Q9BZZ5 524 aaKnown RBP26.18■■□□□ 1.78
SMCO4-203ENST00000526869 MVPQ14764 893 aaKnown RBP26.17■■□□□ 1.78
SMCO4-203ENST00000526869 CDCA7Q9BWT1 371 aaPredicted RBP26.17■■□□□ 1.78
SMCO4-203ENST00000526869 TNNQ9UQP3 1299 aa26.17■■□□□ 1.78
SMCO4-203ENST00000526869 COG6Q9Y2V7 657 aa26.17■■□□□ 1.78
SMCO4-203ENST00000526869 THRAP3Q9Y2W1 955 aaKnown RBP26.17■■□□□ 1.78
SMCO4-203ENST00000526869 HEG1Q9ULI3 1381 aa26.17■■□□□ 1.78
SMCO4-203ENST00000526869 CACNA1FO60840 1977 aa26.16■■□□□ 1.78
SMCO4-203ENST00000526869 CCDC30Q5VVM6 783 aa26.16■■□□□ 1.78
SMCO4-203ENST00000526869 PTPRCP08575 1304 aa26.15■■□□□ 1.78
SMCO4-203ENST00000526869 SPATA31A1Q5TZJ5 1347 aa26.14■■□□□ 1.78
SMCO4-203ENST00000526869 ERVV-2B6SEH9 535 aa26.14■■□□□ 1.78
SMCO4-203ENST00000526869 CLUAP1Q96AJ1 413 aa26.14■■□□□ 1.78
SMCO4-203ENST00000526869 ABCC4O15439 1325 aa26.14■■□□□ 1.77
SMCO4-203ENST00000526869 STK31Q9BXU1 1019 aa26.13■■□□□ 1.77
SMCO4-203ENST00000526869 DDX19BQ9UMR2 479 aa26.13■■□□□ 1.77
SMCO4-203ENST00000526869 LRP6O75581 1613 aa26.12■■□□□ 1.77
SMCO4-203ENST00000526869 TNS2Q63HR2 1409 aa26.12■■□□□ 1.77
SMCO4-203ENST00000526869 SPATA31A5Q5VU36 1347 aa26.11■■□□□ 1.77
SMCO4-203ENST00000526869 SPATA31A7Q8IWB4 1347 aa26.11■■□□□ 1.77
SMCO4-203ENST00000526869 TCERG1O14776 1098 aaKnown RBP26.1■■□□□ 1.77
SMCO4-203ENST00000526869 USP35Q9P2H5 1018 aa26.1■■□□□ 1.77
SMCO4-203ENST00000526869 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.1■■□□□ 1.77
SMCO4-203ENST00000526869 KCNQ3O43525 872 aa26.09■■□□□ 1.77
SMCO4-203ENST00000526869 SLC4A2P04920 1241 aa26.09■■□□□ 1.77
SMCO4-203ENST00000526869 CABP4P57796 275 aa26.09■■□□□ 1.77
SMCO4-203ENST00000526869 ZNF790Q6PG37 636 aa26.09■■□□□ 1.77
SMCO4-203ENST00000526869 NFATC2IPQ8NCF5 419 aa26.09■■□□□ 1.77
SMCO4-203ENST00000526869 CHMP4BQ9H444 224 aaKnown RBP26.09■■□□□ 1.77
SMCO4-203ENST00000526869 PAPPAQ13219 1627 aa26.09■■□□□ 1.77
SMCO4-203ENST00000526869 RGS12O14924 1447 aa26.08■■□□□ 1.77
SMCO4-203ENST00000526869 HDGFL1Q5TGJ6 251 aa26.08■■□□□ 1.77
SMCO4-203ENST00000526869 UNC5CLQ8IV45 518 aa26.08■■□□□ 1.77
SMCO4-203ENST00000526869 TMEM57Q8N5G2 664 aa26.08■■□□□ 1.77
SMCO4-203ENST00000526869 HSPA1LP34931 641 aa26.07■■□□□ 1.76
SMCO4-203ENST00000526869 BARGINQ6ZT62 677 aa26.07■■□□□ 1.76
SMCO4-203ENST00000526869 FNBP4Q8N3X1 1017 aaPredicted RBP26.07■■□□□ 1.76
SMCO4-203ENST00000526869 TOGARAM1Q9Y4F4 1720 aa26.07■■□□□ 1.76
SMCO4-203ENST00000526869 GIGYF1O75420 1035 aaPredicted RBP26.06■■□□□ 1.76
SMCO4-203ENST00000526869 ITPRIPQ8IWB1 547 aa26.06■■□□□ 1.76
SMCO4-203ENST00000526869 DDX54Q8TDD1 881 aaKnown RBP26.06■■□□□ 1.76
SMCO4-203ENST00000526869 BCL9LQ86UU0 1499 aa26.05■■□□□ 1.76
SMCO4-203ENST00000526869 SOCS7O14512 581 aa26.05■■□□□ 1.76
SMCO4-203ENST00000526869 UBR2Q8IWV8 1755 aa26.05■■□□□ 1.76
SMCO4-203ENST00000526869 EXOC5O00471 708 aa26.04■■□□□ 1.76
SMCO4-203ENST00000526869 VPS72Q15906 364 aa26.03■■□□□ 1.76
SMCO4-203ENST00000526869 INTS3Q68E01 1043 aaKnown RBP26.03■■□□□ 1.76
SMCO4-203ENST00000526869 TTC5Q8N0Z6 440 aa26.03■■□□□ 1.76
SMCO4-203ENST00000526869 NGLY1Q96IV0 654 aa26.03■■□□□ 1.76
SMCO4-203ENST00000526869 KDM2BQ8NHM5 1336 aa26.03■■□□□ 1.76
SMCO4-203ENST00000526869 CENPQQ7L2Z9 268 aaPredicted RBP26.02■■□□□ 1.76
SMCO4-203ENST00000526869 GLI3P10071 1580 aa26.02■■□□□ 1.76
SMCO4-203ENST00000526869 PXDNLA1KZ92 1463 aa26.01■■□□□ 1.75
SMCO4-203ENST00000526869 C5P01031 1676 aa26.01■■□□□ 1.75
SMCO4-203ENST00000526869 N4BP2Q86UW6 1770 aaPredicted RBP26.01■■□□□ 1.75
SMCO4-203ENST00000526869 C8orf37Q96NL8 207 aa26.01■■□□□ 1.75
SMCO4-203ENST00000526869 LAMB4A4D0S4 1761 aa26■■□□□ 1.75
SMCO4-203ENST00000526869 FLIIQ13045 1269 aa26■■□□□ 1.75
SMCO4-203ENST00000526869 SLC39A6Q13433 755 aa26■■□□□ 1.75
SMCO4-203ENST00000526869 G2E3Q7L622 706 aa26■■□□□ 1.75
SMCO4-203ENST00000526869 FMNL2Q96PY5 1086 aa26■■□□□ 1.75
SMCO4-203ENST00000526869 ZBTB40Q9NUA8 1239 aa25.99■■□□□ 1.75
SMCO4-203ENST00000526869 DBF4Q9UBU7 674 aaPredicted RBP25.99■■□□□ 1.75
SMCO4-203ENST00000526869 KCPQ6ZWJ8 1503 aa25.98■■□□□ 1.75
SMCO4-203ENST00000526869 SNRPA1P09661 255 aaKnown RBP25.97■■□□□ 1.75
SMCO4-203ENST00000526869 EIF2S2P20042 333 aaKnown RBP25.97■■□□□ 1.75
SMCO4-203ENST00000526869 ZNF496Q96IT1 587 aaPredicted RBP25.97■■□□□ 1.75
SMCO4-203ENST00000526869 ZBTB7BO15156 539 aaPredicted RBP25.96■■□□□ 1.75
SMCO4-203ENST00000526869 DDB1Q16531 1140 aa25.96■■□□□ 1.75
SMCO4-203ENST00000526869 NECTIN2Q92692 538 aa25.96■■□□□ 1.75
SMCO4-203ENST00000526869 TMOD3Q9NYL9 352 aa25.96■■□□□ 1.75
SMCO4-203ENST00000526869 CCDC9Q9Y3X0 531 aaKnown RBP25.96■■□□□ 1.75
SMCO4-203ENST00000526869 ITGB4P16144 1822 aa25.95■■□□□ 1.75
SMCO4-203ENST00000526869 CCT4P50991 539 aaKnown RBP25.95■■□□□ 1.74
SMCO4-203ENST00000526869 CHPF2Q9P2E5 772 aa25.95■■□□□ 1.74
SMCO4-203ENST00000526869 PCDHB15Q9Y5E8 787 aa25.94■■□□□ 1.74
SMCO4-203ENST00000526869 FKBP5Q13451 457 aaPredicted RBP25.93■■□□□ 1.74
SMCO4-203ENST00000526869 HYPKQ9NX55 129 aa25.93■■□□□ 1.74
SMCO4-203ENST00000526869 USP21Q9UK80 565 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms