RNA–Protein interactions for RNA: ENST00000526789.1

COMMD9-204, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-204ENST00000526789 SRPK2P78362 688 aaKnown RBP10.4□□□□□ -0.74
COMMD9-204ENST00000526789 TPRNQ4KMQ1 711 aa10.4□□□□□ -0.74
COMMD9-204ENST00000526789 DCAF11Q8TEB1 546 aa10.4□□□□□ -0.74
COMMD9-204ENST00000526789 PEAK1Q9H792 1746 aa10.39□□□□□ -0.75
COMMD9-204ENST00000526789 G3V3G9 751 aa10.39□□□□□ -0.75
COMMD9-204ENST00000526789 HOXB3P14651 431 aaPredicted RBP10.39□□□□□ -0.75
COMMD9-204ENST00000526789 CDCA7Q9BWT1 371 aaPredicted RBP10.39□□□□□ -0.75
COMMD9-204ENST00000526789 GPHNQ9NQX3 736 aaPredicted RBP10.39□□□□□ -0.75
COMMD9-204ENST00000526789 LMO7Q8WWI1 1683 aa10.38□□□□□ -0.75
COMMD9-204ENST00000526789 GRIN3BO60391 1043 aa10.38□□□□□ -0.75
COMMD9-204ENST00000526789 HOXB1P14653 301 aaPredicted RBP10.38□□□□□ -0.75
COMMD9-204ENST00000526789 PPP1R15BQ5SWA1 713 aa10.38□□□□□ -0.75
COMMD9-204ENST00000526789 ARHGEF1Q92888 912 aaKnown RBP10.38□□□□□ -0.75
COMMD9-204ENST00000526789 HSPA6P17066 643 aa10.37□□□□□ -0.75
COMMD9-204ENST00000526789 ZNF710Q8N1W2 664 aa10.37□□□□□ -0.75
COMMD9-204ENST00000526789 NLGN2Q8NFZ4 835 aa10.37□□□□□ -0.75
COMMD9-204ENST00000526789 USP19O94966 1318 aa10.36□□□□□ -0.75
COMMD9-204ENST00000526789 ATP10DQ9P241 1426 aa10.36□□□□□ -0.75
COMMD9-204ENST00000526789 TMC2Q8TDI7 906 aa10.36□□□□□ -0.75
COMMD9-204ENST00000526789 TFCP2L1Q9NZI6 479 aa10.36□□□□□ -0.75
COMMD9-204ENST00000526789 TOPAZ1Q8N9V7 1692 aa10.36□□□□□ -0.75
COMMD9-204ENST00000526789 WDR17Q8IZU2 1322 aa10.35□□□□□ -0.75
COMMD9-204ENST00000526789 ADGRB1O14514 1584 aa10.35□□□□□ -0.75
COMMD9-204ENST00000526789 CAMK2BQ13554 666 aa10.35□□□□□ -0.75
COMMD9-204ENST00000526789 ZNF827Q17R98 1081 aa10.35□□□□□ -0.75
COMMD9-204ENST00000526789 POLR3AO14802 1390 aaPredicted RBP10.35□□□□□ -0.75
COMMD9-204ENST00000526789 BRD4O60885 1362 aaPredicted RBP10.35□□□□□ -0.75
COMMD9-204ENST00000526789 MAP3K5Q99683 1374 aa10.35□□□□□ -0.75
COMMD9-204ENST00000526789 SHANK3Q9BYB0 1731 aa10.35□□□□□ -0.75
COMMD9-204ENST00000526789 UTRNP46939 3433 aa10.35□□□□□ -0.75
COMMD9-204ENST00000526789 DSG2Q14126 1118 aa10.34□□□□□ -0.75
COMMD9-204ENST00000526789 SYTL4Q96C24 671 aaPredicted RBP10.34□□□□□ -0.75
COMMD9-204ENST00000526789 AATKQ6ZMQ8 1374 aa10.34□□□□□ -0.75
COMMD9-204ENST00000526789 PPIP5K1Q6PFW1 1433 aa10.33□□□□□ -0.76
COMMD9-204ENST00000526789 PLEKHG3A1L390 1219 aa10.33□□□□□ -0.76
COMMD9-204ENST00000526789 C2orf72A6NCS6 295 aa10.33□□□□□ -0.76
COMMD9-204ENST00000526789 YBX3P16989 372 aaKnown RBP eCLIP10.33□□□□□ -0.76
COMMD9-204ENST00000526789 SLC16A10Q8TF71 515 aa10.33□□□□□ -0.76
COMMD9-204ENST00000526789 CARD10Q9BWT7 1032 aa10.33□□□□□ -0.76
COMMD9-204ENST00000526789 NLRP2Q9NX02 1062 aa10.33□□□□□ -0.76
COMMD9-204ENST00000526789 WWC3Q9ULE0 1092 aa10.33□□□□□ -0.76
COMMD9-204ENST00000526789 AXIN2Q9Y2T1 843 aa10.33□□□□□ -0.76
COMMD9-204ENST00000526789 WNK3Q9BYP7 1800 aa10.33□□□□□ -0.76
COMMD9-204ENST00000526789 ARHGEF28Q8N1W1 1705 aaKnown RBP10.33□□□□□ -0.76
COMMD9-204ENST00000526789 VARS2Q5ST30 1063 aaKnown RBP10.32□□□□□ -0.76
COMMD9-204ENST00000526789 USP6P35125 1406 aa10.32□□□□□ -0.76
COMMD9-204ENST00000526789 RGPD5Q99666 1765 aa10.31□□□□□ -0.76
COMMD9-204ENST00000526789 KIF3CO14782 793 aa10.31□□□□□ -0.76
COMMD9-204ENST00000526789 KCNQ4P56696 695 aa10.31□□□□□ -0.76
COMMD9-204ENST00000526789 FOXK1P85037 733 aa10.31□□□□□ -0.76
COMMD9-204ENST00000526789 MSL1Q68DK7 614 aa10.31□□□□□ -0.76
COMMD9-204ENST00000526789 TMEM92Q6UXU6 159 aa10.31□□□□□ -0.76
COMMD9-204ENST00000526789 KCNH5Q8NCM2 988 aa10.3□□□□□ -0.76
COMMD9-204ENST00000526789 LRRC4BQ9NT99 713 aa10.3□□□□□ -0.76
COMMD9-204ENST00000526789 CABP1Q9NZU7 370 aa10.3□□□□□ -0.76
COMMD9-204ENST00000526789 ARIH1Q9Y4X5 557 aaPredicted RBP10.3□□□□□ -0.76
COMMD9-204ENST00000526789 BCL9O00512 1426 aa10.3□□□□□ -0.76
COMMD9-204ENST00000526789 BTAF1O14981 1849 aa10.3□□□□□ -0.76
COMMD9-204ENST00000526789 CCDC7Q96M83 1385 aa10.29□□□□□ -0.76
COMMD9-204ENST00000526789 NHSQ6T4R5 1651 aa10.29□□□□□ -0.76
COMMD9-204ENST00000526789 DDX54Q8TDD1 881 aaKnown RBP10.29□□□□□ -0.76
COMMD9-204ENST00000526789 CPSF1Q10570 1443 aaKnown RBP10.29□□□□□ -0.76
COMMD9-204ENST00000526789 TNS2Q63HR2 1409 aa10.29□□□□□ -0.76
COMMD9-204ENST00000526789 PNPLA7Q6ZV29 1317 aa10.29□□□□□ -0.76
COMMD9-204ENST00000526789 SEMA3EO15041 775 aa10.28□□□□□ -0.76
COMMD9-204ENST00000526789 IL2RBP14784 551 aa10.28□□□□□ -0.76
COMMD9-204ENST00000526789 APLP1P51693 650 aa10.28□□□□□ -0.76
COMMD9-204ENST00000526789 DOK7Q18PE1 504 aa10.28□□□□□ -0.76
COMMD9-204ENST00000526789 SLC27A3Q5K4L6 730 aa10.28□□□□□ -0.76
COMMD9-204ENST00000526789 PLPP6Q8IY26 295 aa10.28□□□□□ -0.76
COMMD9-204ENST00000526789 EMILIN3Q9NT22 766 aa10.28□□□□□ -0.76
COMMD9-204ENST00000526789 ARHGEF25Q86VW2 580 aa10.27□□□□□ -0.77
COMMD9-204ENST00000526789 PAPPAQ13219 1627 aa10.25□□□□□ -0.77
COMMD9-204ENST00000526789 COL18A1P39060 1754 aa10.25□□□□□ -0.77
COMMD9-204ENST00000526789 SLIT3O75094 1523 aa10.25□□□□□ -0.77
COMMD9-204ENST00000526789 TESPA1A2RU30 521 aaPredicted RBP10.25□□□□□ -0.77
COMMD9-204ENST00000526789 TNS4Q8IZW8 715 aa10.25□□□□□ -0.77
COMMD9-204ENST00000526789 ZNF687Q8N1G0 1237 aa10.25□□□□□ -0.77
COMMD9-204ENST00000526789 STAC3Q96MF2 364 aa10.25□□□□□ -0.77
COMMD9-204ENST00000526789 CCNL1Q9UK58 526 aaPredicted RBP10.25□□□□□ -0.77
COMMD9-204ENST00000526789 CEP350Q5VT06 3117 aa10.25□□□□□ -0.77
COMMD9-204ENST00000526789 CENPJQ9HC77 1338 aaPredicted RBP10.25□□□□□ -0.77
COMMD9-204ENST00000526789 DPYSL4O14531 572 aa10.24□□□□□ -0.77
COMMD9-204ENST00000526789 C16orf71Q8IYS4 520 aaPredicted RBP10.24□□□□□ -0.77
COMMD9-204ENST00000526789 LTV1Q96GA3 475 aaPredicted RBP10.24□□□□□ -0.77
COMMD9-204ENST00000526789 PIK3C2AO00443 1686 aa10.23□□□□□ -0.77
COMMD9-204ENST00000526789 QRICH2Q9H0J4 1663 aa10.23□□□□□ -0.77
COMMD9-204ENST00000526789 PRIM1P49642 420 aaKnown RBP10.23□□□□□ -0.77
COMMD9-204ENST00000526789 COL13A1Q5TAT6 717 aaPredicted RBP10.23□□□□□ -0.77
COMMD9-204ENST00000526789 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.23□□□□□ -0.77
COMMD9-204ENST00000526789 COL23A1Q86Y22 540 aaPredicted RBP10.23□□□□□ -0.77
COMMD9-204ENST00000526789 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.23□□□□□ -0.77
COMMD9-204ENST00000526789 ABCC6O95255 1503 aa10.23□□□□□ -0.77
COMMD9-204ENST00000526789 TUBGCP6Q96RT7 1819 aa10.22□□□□□ -0.77
COMMD9-204ENST00000526789 ANKRD24Q8TF21 1146 aa10.22□□□□□ -0.77
COMMD9-204ENST00000526789 TTC21BQ7Z4L5 1316 aa10.22□□□□□ -0.77
COMMD9-204ENST00000526789 RIMBP2O15034 1052 aa10.21□□□□□ -0.77
COMMD9-204ENST00000526789 NBPF1Q3BBV0 1214 aa10.21□□□□□ -0.77
COMMD9-204ENST00000526789 CD2APQ9Y5K6 639 aa10.21□□□□□ -0.77
COMMD9-204ENST00000526789 EVC2Q86UK5 1308 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms