RNA–Protein interactions for RNA: ENST00000526606.1

AMBRA1-205, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 4

Gene AMBRA1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-205ENST00000526606 KIF24Q5T7B8 1368 aa27.48■■□□□ 1.99
AMBRA1-205ENST00000526606 ATG3Q9NT62 314 aa27.47■■□□□ 1.99
AMBRA1-205ENST00000526606 EMILIN1Q9Y6C2 1016 aa27.47■■□□□ 1.99
AMBRA1-205ENST00000526606 DPEP1P16444 411 aa27.46■■□□□ 1.99
AMBRA1-205ENST00000526606 JMYQ8N9B5 988 aa27.46■■□□□ 1.99
AMBRA1-205ENST00000526606 RBM46Q8TBY0 533 aaKnown RBP27.46■■□□□ 1.99
AMBRA1-205ENST00000526606 KLRG1Q96E93 195 aa27.46■■□□□ 1.99
AMBRA1-205ENST00000526606 C10orf71Q711Q0 1435 aa27.46■■□□□ 1.99
AMBRA1-205ENST00000526606 KCNA3P22001 575 aa27.45■■□□□ 1.98
AMBRA1-205ENST00000526606 SLC4A9Q96Q91 983 aa27.45■■□□□ 1.98
AMBRA1-205ENST00000526606 TMOD3Q9NYL9 352 aa27.45■■□□□ 1.98
AMBRA1-205ENST00000526606 SPG7Q9UQ90 795 aa27.44■■□□□ 1.98
AMBRA1-205ENST00000526606 BRCA1P38398 1863 aaKnown RBP27.43■■□□□ 1.98
AMBRA1-205ENST00000526606 TMF1P82094 1093 aa27.43■■□□□ 1.98
AMBRA1-205ENST00000526606 NLGN1Q8N2Q7 840 aa27.43■■□□□ 1.98
AMBRA1-205ENST00000526606 FCHSD2O94868 740 aa27.42■■□□□ 1.98
AMBRA1-205ENST00000526606 TRAPPC3LQ5T215 181 aa27.42■■□□□ 1.98
AMBRA1-205ENST00000526606 C9orf131Q5VYM1 1079 aa27.42■■□□□ 1.98
AMBRA1-205ENST00000526606 ARHGEF1Q92888 912 aaKnown RBP27.41■■□□□ 1.98
AMBRA1-205ENST00000526606 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.41■■□□□ 1.988e-9■■□□□ 13.5
AMBRA1-205ENST00000526606 TONSLQ96HA7 1378 aa27.4■■□□□ 1.98
AMBRA1-205ENST00000526606 SLC24A1O60721 1099 aa27.4■■□□□ 1.98
AMBRA1-205ENST00000526606 GYS1P13807 737 aa27.4■■□□□ 1.98
AMBRA1-205ENST00000526606 PHKG2P15735 406 aa27.4■■□□□ 1.98
AMBRA1-205ENST00000526606 EYA1Q99502 592 aa27.4■■□□□ 1.98
AMBRA1-205ENST00000526606 KIF20BQ96Q89 1820 aa27.39■■□□□ 1.98
AMBRA1-205ENST00000526606 KDRP35968 1356 aa27.39■■□□□ 1.98
AMBRA1-205ENST00000526606 CARD14Q9BXL6 1004 aa27.39■■□□□ 1.98
AMBRA1-205ENST00000526606 RTCBQ9Y3I0 505 aaKnown RBP27.39■■□□□ 1.98
AMBRA1-205ENST00000526606 C4AP0C0L4 1744 aa27.37■■□□□ 1.97
AMBRA1-205ENST00000526606 FSTL1Q12841 308 aa27.37■■□□□ 1.97
AMBRA1-205ENST00000526606 IFNL2Q8IZJ0 200 aa27.37■■□□□ 1.97
AMBRA1-205ENST00000526606 CCDC87Q9NVE4 849 aa27.37■■□□□ 1.97
AMBRA1-205ENST00000526606 CAPN15O75808 1086 aa27.35■■□□□ 1.97
AMBRA1-205ENST00000526606 RC3H1Q5TC82 1133 aaKnown RBP27.35■■□□□ 1.97
AMBRA1-205ENST00000526606 KCPQ6ZWJ8 1503 aa27.35■■□□□ 1.97
AMBRA1-205ENST00000526606 WASHC2AQ641Q2 1341 aa27.35■■□□□ 1.97
AMBRA1-205ENST00000526606 ARFGEF1Q9Y6D6 1849 aa27.34■■□□□ 1.97
AMBRA1-205ENST00000526606 PPM1GO15355 546 aaPredicted RBP27.33■■□□□ 1.97
AMBRA1-205ENST00000526606 C16orf71Q8IYS4 520 aaPredicted RBP27.33■■□□□ 1.97
AMBRA1-205ENST00000526606 DCAF5Q96JK2 942 aa27.33■■□□□ 1.97
AMBRA1-205ENST00000526606 RRAGCQ9HB90 399 aa27.33■■□□□ 1.97
AMBRA1-205ENST00000526606 MYH14Q7Z406 1995 aaKnown RBP27.32■■□□□ 1.96
AMBRA1-205ENST00000526606 RPS6KA4O75676 772 aa27.32■■□□□ 1.96
AMBRA1-205ENST00000526606 ADRA2BP18089 450 aa27.32■■□□□ 1.96
AMBRA1-205ENST00000526606 PARP3Q9Y6F1 533 aa27.32■■□□□ 1.96
AMBRA1-205ENST00000526606 ZNF831Q5JPB2 1677 aa27.31■■□□□ 1.96
AMBRA1-205ENST00000526606 PIM2Q9P1W9 311 aa27.31■■□□□ 1.96
AMBRA1-205ENST00000526606 PLEKHG2Q9H7P9 1386 aa27.31■■□□□ 1.96
AMBRA1-205ENST00000526606 COL5A3P25940 1745 aaPredicted RBP27.3■■□□□ 1.96
AMBRA1-205ENST00000526606 ANKRD26Q9UPS8 1709 aa27.3■■□□□ 1.96
AMBRA1-205ENST00000526606 RFC4P35249 363 aa27.3■■□□□ 1.96
AMBRA1-205ENST00000526606 RBM42Q9BTD8 480 aaKnown RBP27.3■■□□□ 1.96
AMBRA1-205ENST00000526606 CNTNAP4Q9C0A0 1308 aa27.3■■□□□ 1.96
AMBRA1-205ENST00000526606 TNS4Q8IZW8 715 aa27.29■■□□□ 1.96
AMBRA1-205ENST00000526606 KDM2BQ8NHM5 1336 aa27.28■■□□□ 1.96
AMBRA1-205ENST00000526606 PRELPP51888 382 aa27.28■■□□□ 1.96
AMBRA1-205ENST00000526606 RNF181Q9P0P0 153 aa27.28■■□□□ 1.96
AMBRA1-205ENST00000526606 SBF1O95248 1867 aa27.27■■□□□ 1.96
AMBRA1-205ENST00000526606 ERVV-2B6SEH9 535 aa27.26■■□□□ 1.95
AMBRA1-205ENST00000526606 DDR1Q08345 913 aa27.26■■□□□ 1.95
AMBRA1-205ENST00000526606 DALRD3Q5D0E6 543 aaKnown RBP27.26■■□□□ 1.95
AMBRA1-205ENST00000526606 POLKQ9UBT6 870 aa27.26■■□□□ 1.95
AMBRA1-205ENST00000526606 SRP68Q9UHB9 627 aaKnown RBP27.25■■□□□ 1.95
AMBRA1-205ENST00000526606 CHRNA5P30532 468 aa27.24■■□□□ 1.95
AMBRA1-205ENST00000526606 FKBP8Q14318 412 aa27.24■■□□□ 1.95
AMBRA1-205ENST00000526606 EIF4A2Q14240 407 aaKnown RBP27.22■■□□□ 1.95
AMBRA1-205ENST00000526606 SMC1BQ8NDV3 1235 aa27.21■■□□□ 1.95
AMBRA1-205ENST00000526606 TNRC6CQ9HCJ0 1690 aaKnown RBP27.21■■□□□ 1.95
AMBRA1-205ENST00000526606 KDM6AO15550 1401 aaPredicted RBP27.19■■□□□ 1.94
AMBRA1-205ENST00000526606 USP42Q9H9J4 1324 aaKnown RBP27.18■■□□□ 1.94
AMBRA1-205ENST00000526606 TM4SF1P30408 202 aa27.18■■□□□ 1.94
AMBRA1-205ENST00000526606 CRKLP46109 303 aaKnown RBP27.18■■□□□ 1.94
AMBRA1-205ENST00000526606 POLRMTO00411 1230 aaKnown RBP27.16■■□□□ 1.94
AMBRA1-205ENST00000526606 PTCD1O75127 700 aaKnown RBP27.16■■□□□ 1.94
AMBRA1-205ENST00000526606 CDCA8Q53HL2 280 aa27.16■■□□□ 1.94
AMBRA1-205ENST00000526606 HSPA1AP0DMV8 641 aaKnown RBP27.15■■□□□ 1.94
AMBRA1-205ENST00000526606 HSPA1BP0DMV9 641 aaKnown RBP27.15■■□□□ 1.94
AMBRA1-205ENST00000526606 RASSF7Q02833 373 aa27.15■■□□□ 1.94
AMBRA1-205ENST00000526606 ADAMTS7Q9UKP4 1686 aa27.14■■□□□ 1.94
AMBRA1-205ENST00000526606 CABP4P57796 275 aa27.14■■□□□ 1.94
AMBRA1-205ENST00000526606 HSP90AB1P08238 724 aaKnown RBP27.13■■□□□ 1.93
AMBRA1-205ENST00000526606 INTS5Q6P9B9 1019 aaKnown RBP27.13■■□□□ 1.93
AMBRA1-205ENST00000526606 NFATC2IPQ8NCF5 419 aa27.11■■□□□ 1.93
AMBRA1-205ENST00000526606 GLTPD2A6NH11 291 aa27.1■■□□□ 1.93
AMBRA1-205ENST00000526606 VEGFAP15692 232 aaPredicted RBP27.1■■□□□ 1.93
AMBRA1-205ENST00000526606 PLEKHO1Q53GL0 409 aaPredicted RBP27.1■■□□□ 1.93
AMBRA1-205ENST00000526606 ZC3H4Q9UPT8 1303 aaKnown RBP27.1■■□□□ 1.93
AMBRA1-205ENST00000526606 TJP1Q07157 1748 aa27.1■■□□□ 1.93
AMBRA1-205ENST00000526606 POTECB2RU33 542 aa27.09■■□□□ 1.93
AMBRA1-205ENST00000526606 ZNF530Q6P9A1 599 aaPredicted RBP27.09■■□□□ 1.93
AMBRA1-205ENST00000526606 TNNT2P45379 298 aaPredicted RBP27.08■■□□□ 1.93
AMBRA1-205ENST00000526606 LMNB1P20700 586 aa27.07■■□□□ 1.92
AMBRA1-205ENST00000526606 MTHFSP49914 203 aa27.07■■□□□ 1.92
AMBRA1-205ENST00000526606 USPL1Q5W0Q7 1092 aa27.06■■□□□ 1.92
AMBRA1-205ENST00000526606 AFDNP55196 1824 aaKnown RBP27.05■■□□□ 1.92
AMBRA1-205ENST00000526606 AMOTQ4VCS5 1084 aa27.04■■□□□ 1.92
AMBRA1-205ENST00000526606 AEBP1Q8IUX7 1158 aa27.04■■□□□ 1.92
AMBRA1-205ENST00000526606 CCDC88AQ3V6T2 1871 aa27.04■■□□□ 1.92
AMBRA1-205ENST00000526606 NFIXQ14938 502 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms