RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 KIF16BQ96L93 1317 aa25.48■■□□□ 1.67
PPP1CA-204ENST00000526510 KCNQ3O43525 872 aa25.47■■□□□ 1.67
PPP1CA-204ENST00000526510 PCDH11XQ9BZA7 1347 aa25.47■■□□□ 1.67
PPP1CA-204ENST00000526510 PCDH11YQ9BZA8 1340 aa25.47■■□□□ 1.67
PPP1CA-204ENST00000526510 BTBD11A6QL63 1104 aa25.46■■□□□ 1.67
PPP1CA-204ENST00000526510 TRIM27P14373 513 aa25.46■■□□□ 1.67
PPP1CA-204ENST00000526510 LRP6O75581 1613 aa25.46■■□□□ 1.67
PPP1CA-204ENST00000526510 ATF7IPQ6VMQ6 1270 aa25.45■■□□□ 1.67
PPP1CA-204ENST00000526510 CLUAP1Q96AJ1 413 aa25.45■■□□□ 1.67
PPP1CA-204ENST00000526510 DCAF5Q96JK2 942 aa25.45■■□□□ 1.67
PPP1CA-204ENST00000526510 COG6Q9Y2V7 657 aa25.45■■□□□ 1.67
PPP1CA-204ENST00000526510 TOGARAM1Q9Y4F4 1720 aa25.45■■□□□ 1.67
PPP1CA-204ENST00000526510 EIF4A1P60842 406 aaKnown RBP25.45■■□□□ 1.66
PPP1CA-204ENST00000526510 HSPA1LP34931 641 aa25.44■■□□□ 1.66
PPP1CA-204ENST00000526510 SLC52A2Q9HAB3 445 aa25.44■■□□□ 1.66
PPP1CA-204ENST00000526510 HSP90AB1P08238 724 aaKnown RBP25.43■■□□□ 1.66
PPP1CA-204ENST00000526510 DZIP1LQ8IYY4 767 aaKnown RBP25.43■■□□□ 1.66
PPP1CA-204ENST00000526510 CCDC136Q96JN2 1154 aa25.43■■□□□ 1.66
PPP1CA-204ENST00000526510 IPO8O15397 1037 aaKnown RBP25.42■■□□□ 1.66
PPP1CA-204ENST00000526510 NKX1-1Q15270 411 aaPredicted RBP25.42■■□□□ 1.66
PPP1CA-204ENST00000526510 SOS1Q07889 1333 aaPredicted RBP25.41■■□□□ 1.66
PPP1CA-204ENST00000526510 SPATA31A1Q5TZJ5 1347 aa25.41■■□□□ 1.66
PPP1CA-204ENST00000526510 SPATA31A6Q5VVP1 1343 aa25.41■■□□□ 1.66
PPP1CA-204ENST00000526510 NFATC2IPQ8NCF5 419 aa25.41■■□□□ 1.66
PPP1CA-204ENST00000526510 C5P01031 1676 aa25.4■■□□□ 1.66
PPP1CA-204ENST00000526510 ARHGAP45Q92619 1136 aa25.4■■□□□ 1.66
PPP1CA-204ENST00000526510 HEG1Q9ULI3 1381 aa25.4■■□□□ 1.66
PPP1CA-204ENST00000526510 DDX54Q8TDD1 881 aaKnown RBP25.39■■□□□ 1.66
PPP1CA-204ENST00000526510 ITGB4P16144 1822 aa25.39■■□□□ 1.65
PPP1CA-204ENST00000526510 MS4A1P11836 297 aa25.39■■□□□ 1.65
PPP1CA-204ENST00000526510 FTSJ3Q8IY81 847 aaKnown RBP25.39■■□□□ 1.65
PPP1CA-204ENST00000526510 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.38■■□□□ 1.65
PPP1CA-204ENST00000526510 BCL9LQ86UU0 1499 aa25.38■■□□□ 1.65
PPP1CA-204ENST00000526510 PAPPAQ13219 1627 aa25.38■■□□□ 1.65
PPP1CA-204ENST00000526510 SPATA31A5Q5VU36 1347 aa25.37■■□□□ 1.65
PPP1CA-204ENST00000526510 SPATA31A7Q8IWB4 1347 aa25.37■■□□□ 1.65
PPP1CA-204ENST00000526510 MVPQ14764 893 aaKnown RBP25.37■■□□□ 1.65
PPP1CA-204ENST00000526510 C8orf37Q96NL8 207 aa25.37■■□□□ 1.65
PPP1CA-204ENST00000526510 UBR2Q8IWV8 1755 aa25.36■■□□□ 1.65
PPP1CA-204ENST00000526510 RGS12O14924 1447 aa25.36■■□□□ 1.65
PPP1CA-204ENST00000526510 SLC4A2P04920 1241 aa25.36■■□□□ 1.65
PPP1CA-204ENST00000526510 SLC39A6Q13433 755 aa25.36■■□□□ 1.65
PPP1CA-204ENST00000526510 TMEM57Q8N5G2 664 aa25.36■■□□□ 1.65
PPP1CA-204ENST00000526510 UNC5CLQ8IV45 518 aa25.35■■□□□ 1.65
PPP1CA-204ENST00000526510 GLI3P10071 1580 aa25.34■■□□□ 1.65
PPP1CA-204ENST00000526510 HOXB7P09629 217 aa25.34■■□□□ 1.65
PPP1CA-204ENST00000526510 CABP4P57796 275 aa25.34■■□□□ 1.65
PPP1CA-204ENST00000526510 CCDC30Q5VVM6 783 aa25.34■■□□□ 1.65
PPP1CA-204ENST00000526510 ZNF790Q6PG37 636 aa25.34■■□□□ 1.65
PPP1CA-204ENST00000526510 NECTIN2Q92692 538 aa25.34■■□□□ 1.65
PPP1CA-204ENST00000526510 NGLY1Q96IV0 654 aa25.34■■□□□ 1.65
PPP1CA-204ENST00000526510 THRAP3Q9Y2W1 955 aaKnown RBP25.34■■□□□ 1.65
PPP1CA-204ENST00000526510 ABCC4O15439 1325 aa25.34■■□□□ 1.65
PPP1CA-204ENST00000526510 G2E3Q7L622 706 aa25.33■■□□□ 1.65
PPP1CA-204ENST00000526510 TNS2Q63HR2 1409 aa25.33■■□□□ 1.65
PPP1CA-204ENST00000526510 ERVV-2B6SEH9 535 aa25.32■■□□□ 1.64
PPP1CA-204ENST00000526510 FNBP4Q8N3X1 1017 aaPredicted RBP25.32■■□□□ 1.64
PPP1CA-204ENST00000526510 GIGYF1O75420 1035 aaPredicted RBP25.32■■□□□ 1.64
PPP1CA-204ENST00000526510 HDGFL1Q5TGJ6 251 aa25.32■■□□□ 1.64
PPP1CA-204ENST00000526510 API5Q9BZZ5 524 aaKnown RBP25.31■■□□□ 1.64
PPP1CA-204ENST00000526510 PRAMEF22A3QJZ6 481 aa25.3■■□□□ 1.64
PPP1CA-204ENST00000526510 STK31Q9BXU1 1019 aa25.3■■□□□ 1.64
PPP1CA-204ENST00000526510 PTPRCP08575 1304 aa25.3■■□□□ 1.64
PPP1CA-204ENST00000526510 EXOC5O00471 708 aa25.29■■□□□ 1.64
PPP1CA-204ENST00000526510 ITPRIPQ8IWB1 547 aa25.29■■□□□ 1.64
PPP1CA-204ENST00000526510 CDCA7Q9BWT1 371 aaPredicted RBP25.29■■□□□ 1.64
PPP1CA-204ENST00000526510 KAT6BQ8WYB5 2073 aa25.29■■□□□ 1.64
PPP1CA-204ENST00000526510 DOT1LQ8TEK3 1739 aa25.29■■□□□ 1.64
PPP1CA-204ENST00000526510 LAMB4A4D0S4 1761 aa25.29■■□□□ 1.64
PPP1CA-204ENST00000526510 N4BP2Q86UW6 1770 aaPredicted RBP25.29■■□□□ 1.64
PPP1CA-204ENST00000526510 EIF2S2P20042 333 aaKnown RBP25.29■■□□□ 1.64
PPP1CA-204ENST00000526510 CCDC9Q9Y3X0 531 aaKnown RBP25.29■■□□□ 1.64
PPP1CA-204ENST00000526510 VPS72Q15906 364 aa25.28■■□□□ 1.64
PPP1CA-204ENST00000526510 BARGINQ6ZT62 677 aa25.28■■□□□ 1.64
PPP1CA-204ENST00000526510 ZNF496Q96IT1 587 aaPredicted RBP25.27■■□□□ 1.64
PPP1CA-204ENST00000526510 DDX19BQ9UMR2 479 aa25.27■■□□□ 1.64
PPP1CA-204ENST00000526510 KCPQ6ZWJ8 1503 aa25.27■■□□□ 1.64
PPP1CA-204ENST00000526510 AAMPQ13685 434 aa25.26■■□□□ 1.63
PPP1CA-204ENST00000526510 CHPF2Q9P2E5 772 aa25.25■■□□□ 1.63
PPP1CA-204ENST00000526510 KDM2BQ8NHM5 1336 aa25.25■■□□□ 1.63
PPP1CA-204ENST00000526510 FLIIQ13045 1269 aa25.24■■□□□ 1.63
PPP1CA-204ENST00000526510 TTC5Q8N0Z6 440 aa25.24■■□□□ 1.63
PPP1CA-204ENST00000526510 DDB1Q16531 1140 aa25.23■■□□□ 1.63
PPP1CA-204ENST00000526510 USP21Q9UK80 565 aa25.23■■□□□ 1.63
PPP1CA-204ENST00000526510 PCDHB15Q9Y5E8 787 aa25.23■■□□□ 1.63
PPP1CA-204ENST00000526510 PHAXQ9H814 394 aaKnown RBP25.23■■□□□ 1.63
PPP1CA-204ENST00000526510 INTS3Q68E01 1043 aaKnown RBP25.22■■□□□ 1.63
PPP1CA-204ENST00000526510 FMNL2Q96PY5 1086 aa25.22■■□□□ 1.63
PPP1CA-204ENST00000526510 ZBTB40Q9NUA8 1239 aa25.22■■□□□ 1.63
PPP1CA-204ENST00000526510 ZBTB7BO15156 539 aaPredicted RBP25.21■■□□□ 1.63
PPP1CA-204ENST00000526510 MEX3CQ5U5Q3 659 aaKnown RBP25.21■■□□□ 1.63
PPP1CA-204ENST00000526510 CHMP4AQ9BY43 222 aa25.21■■□□□ 1.63
PPP1CA-204ENST00000526510 THSD7AQ9UPZ6 1657 aa25.2■■□□□ 1.63
PPP1CA-204ENST00000526510 F6X3S4 739 aa25.2■■□□□ 1.63
PPP1CA-204ENST00000526510 ANXA1P04083 346 aa25.2■■□□□ 1.63
PPP1CA-204ENST00000526510 FAM98CQ17RN3 349 aaKnown RBP25.2■■□□□ 1.62
PPP1CA-204ENST00000526510 MARCH10Q8NA82 808 aaPredicted RBP25.2■■□□□ 1.62
PPP1CA-204ENST00000526510 TMOD3Q9NYL9 352 aa25.2■■□□□ 1.62
PPP1CA-204ENST00000526510 IGHDP01880 384 aa25.19■■□□□ 1.62
PPP1CA-204ENST00000526510 PROSER3Q2NL68 480 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms