RNA–Protein interactions for RNA: ENST00000526457.3

LRRK1-205, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 11,632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-205ENST00000526457 FSD2A1L4K1 749 aa8.95□□□□□ -0.98
LRRK1-205ENST00000526457 USO1O60763 962 aaKnown RBP8.95□□□□□ -0.98
LRRK1-205ENST00000526457 ANKRD1Q15327 319 aa8.95□□□□□ -0.98
LRRK1-205ENST00000526457 TMEM132AQ24JP5 1023 aa8.95□□□□□ -0.98
LRRK1-205ENST00000526457 CCDC158Q5M9N0 1113 aa8.95□□□□□ -0.98
LRRK1-205ENST00000526457 USP25Q9UHP3 1055 aa8.95□□□□□ -0.98
LRRK1-205ENST00000526457 MAP2K2P36507 400 aa8.95□□□□□ -0.98
LRRK1-205ENST00000526457 TAOK3Q9H2K8 898 aa8.95□□□□□ -0.98
LRRK1-205ENST00000526457 PDZRN3Q9UPQ7 1066 aa8.95□□□□□ -0.98
LRRK1-205ENST00000526457 CCDC97Q96F63 343 aaPredicted RBP8.95□□□□□ -0.98
LRRK1-205ENST00000526457 MXRA7P84157 204 aa8.94□□□□□ -0.98
LRRK1-205ENST00000526457 CYP46A1Q9Y6A2 500 aa8.94□□□□□ -0.98
LRRK1-205ENST00000526457 CETN2P41208 172 aa8.94□□□□□ -0.98
LRRK1-205ENST00000526457 RPUSD2Q8IZ73 545 aaKnown RBP8.94□□□□□ -0.98
LRRK1-205ENST00000526457 FSD1Q9BTV5 496 aa8.94□□□□□ -0.98
LRRK1-205ENST00000526457 TACC1O75410 805 aa8.94□□□□□ -0.98
LRRK1-205ENST00000526457 DNA2P51530 1060 aa8.94□□□□□ -0.98
LRRK1-205ENST00000526457 EVC2Q86UK5 1308 aa8.94□□□□□ -0.98
LRRK1-205ENST00000526457 ADCY5O95622 1261 aa8.94□□□□□ -0.98
LRRK1-205ENST00000526457 FMNL3Q8IVF7 1028 aa8.94□□□□□ -0.98
LRRK1-205ENST00000526457 AK9Q5TCS8 1911 aa8.94□□□□□ -0.98
LRRK1-205ENST00000526457 WASHC4Q2M389 1173 aa8.94□□□□□ -0.98
LRRK1-205ENST00000526457 FAM114A2Q9NRY5 505 aa8.94□□□□□ -0.98
LRRK1-205ENST00000526457 LUC7L2Q9Y383 392 aaKnown RBP8.94□□□□□ -0.98
LRRK1-205ENST00000526457 LACTBP83111 547 aaPredicted RBP8.94□□□□□ -0.98
LRRK1-205ENST00000526457 ZNF853P0CG23 659 aa8.93□□□□□ -0.98
LRRK1-205ENST00000526457 AP1ARQ63HQ0 302 aa8.93□□□□□ -0.98
LRRK1-205ENST00000526457 AKNAQ7Z591 1439 aa8.93□□□□□ -0.98
LRRK1-205ENST00000526457 POLA1P09884 1462 aaPredicted RBP8.93□□□□□ -0.98
LRRK1-205ENST00000526457 STK3Q13188 491 aa8.93□□□□□ -0.98
LRRK1-205ENST00000526457 LMNTD2Q8IXW0 634 aa8.93□□□□□ -0.98
LRRK1-205ENST00000526457 ALS2CR12Q96Q35 445 aa8.93□□□□□ -0.98
LRRK1-205ENST00000526457 HIP1O00291 1037 aa8.93□□□□□ -0.98
LRRK1-205ENST00000526457 ZHX3Q9H4I2 956 aa8.93□□□□□ -0.98
LRRK1-205ENST00000526457 ZSWIM4Q9H7M6 989 aa8.93□□□□□ -0.98
LRRK1-205ENST00000526457 PCK1P35558 622 aa8.93□□□□□ -0.98
LRRK1-205ENST00000526457 KRBA2Q6ZNG9 492 aa8.93□□□□□ -0.98
LRRK1-205ENST00000526457 MYO10Q9HD67 2058 aa8.93□□□□□ -0.98
LRRK1-205ENST00000526457 OGFRQ9NZT2 677 aa8.93□□□□□ -0.98
LRRK1-205ENST00000526457 STIM2Q9P246 746 aa8.93□□□□□ -0.98
LRRK1-205ENST00000526457 BUB1BO60566 1050 aaPredicted RBP8.93□□□□□ -0.98
LRRK1-205ENST00000526457 VPS18Q9P253 973 aa8.93□□□□□ -0.98
LRRK1-205ENST00000526457 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.93□□□□□ -0.98
LRRK1-205ENST00000526457 ANO10Q9NW15 660 aa8.92□□□□□ -0.98
LRRK1-205ENST00000526457 SH2D4BQ5SQS7 431 aa8.92□□□□□ -0.98
LRRK1-205ENST00000526457 LTV1Q96GA3 475 aaPredicted RBP8.92□□□□□ -0.98
LRRK1-205ENST00000526457 FHOD3Q2V2M9 1422 aa8.92□□□□□ -0.98
LRRK1-205ENST00000526457 GBP7Q8N8V2 638 aaPredicted RBP8.92□□□□□ -0.98
LRRK1-205ENST00000526457 CTNNBL1Q8WYA6 563 aaPredicted RBP8.92□□□□□ -0.98
LRRK1-205ENST00000526457 ANAPC4Q9UJX5 808 aa8.92□□□□□ -0.98
LRRK1-205ENST00000526457 AMPHP49418 695 aa8.92□□□□□ -0.98
LRRK1-205ENST00000526457 WDR63Q8IWG1 891 aa8.92□□□□□ -0.98
LRRK1-205ENST00000526457 OPA1O60313 960 aa8.92□□□□□ -0.98
LRRK1-205ENST00000526457 ZBTB16Q05516 673 aa8.92□□□□□ -0.98
LRRK1-205ENST00000526457 WHAMMP3Q1A5X7 153 aa8.92□□□□□ -0.98
LRRK1-205ENST00000526457 ATAD2BQ9ULI0 1458 aa8.92□□□□□ -0.98
LRRK1-205ENST00000526457 APBB1IPQ7Z5R6 666 aaPredicted RBP8.92□□□□□ -0.98
LRRK1-205ENST00000526457 NBPF11Q86T75 865 aa8.92□□□□□ -0.98
LRRK1-205ENST00000526457 ZMAT2Q96NC0 199 aaKnown RBP8.92□□□□□ -0.98
LRRK1-205ENST00000526457 PPP1R14CQ8TAE6 165 aa8.92□□□□□ -0.98
LRRK1-205ENST00000526457 RAB3IL1Q8TBN0 382 aa8.92□□□□□ -0.98
LRRK1-205ENST00000526457 A0A1W2PRG0 241 aa8.92□□□□□ -0.98
LRRK1-205ENST00000526457 PDE3AQ14432 1141 aa8.92□□□□□ -0.98
LRRK1-205ENST00000526457 NECTIN2Q92692 538 aa8.92□□□□□ -0.98
LRRK1-205ENST00000526457 CEP128Q6ZU80 1094 aa8.91□□□□□ -0.98
LRRK1-205ENST00000526457 CWC25Q9NXE8 425 aaPredicted RBP8.91□□□□□ -0.98
LRRK1-205ENST00000526457 CADPSQ9ULU8 1353 aa8.91□□□□□ -0.98
LRRK1-205ENST00000526457 GCKP35557 465 aa8.91□□□□□ -0.98
LRRK1-205ENST00000526457 FKBP5Q13451 457 aaPredicted RBP8.91□□□□□ -0.98
LRRK1-205ENST00000526457 RBBP5Q15291 538 aaKnown RBP8.91□□□□□ -0.98
LRRK1-205ENST00000526457 HFM1A2PYH4 1435 aa8.91□□□□□ -0.98
LRRK1-205ENST00000526457 DESP17661 470 aa8.91□□□□□ -0.98
LRRK1-205ENST00000526457 VPS36Q86VN1 386 aa8.91□□□□□ -0.98
LRRK1-205ENST00000526457 CCDC50Q8IVM0 306 aa8.91□□□□□ -0.98
LRRK1-205ENST00000526457 B4GALNT4Q76KP1 1039 aa8.91□□□□□ -0.98
LRRK1-205ENST00000526457 CCDC155Q8N6L0 562 aa8.91□□□□□ -0.98
LRRK1-205ENST00000526457 HOMER2Q9NSB8 354 aa8.91□□□□□ -0.98
LRRK1-205ENST00000526457 MTMR7Q9Y216 660 aa8.91□□□□□ -0.98
LRRK1-205ENST00000526457 RABGAP1Q9Y3P9 1069 aa8.91□□□□□ -0.98
LRRK1-205ENST00000526457 SSBP05455 408 aaKnown RBP eCLIP8.91□□□□□ -0.98
LRRK1-205ENST00000526457 CCDC174Q6PII3 467 aa8.91□□□□□ -0.98
LRRK1-205ENST00000526457 TMC6Q7Z403 805 aa8.91□□□□□ -0.98
LRRK1-205ENST00000526457 ZNF365Q70YC5 407 aa8.91□□□□□ -0.98
LRRK1-205ENST00000526457 PTPN23Q9H3S7 1636 aa8.91□□□□□ -0.98
LRRK1-205ENST00000526457 FERP16591 822 aa8.91□□□□□ -0.98
LRRK1-205ENST00000526457 TRIM22Q8IYM9 498 aa8.91□□□□□ -0.98
LRRK1-205ENST00000526457 CCDC12Q8WUD4 166 aaPredicted RBP8.91□□□□□ -0.98
LRRK1-205ENST00000526457 NUP88Q99567 741 aaPredicted RBP8.91□□□□□ -0.98
LRRK1-205ENST00000526457 EIF2S2P20042 333 aaKnown RBP8.9□□□□□ -0.98
LRRK1-205ENST00000526457 ZBTB12Q9Y330 459 aaPredicted RBP8.9□□□□□ -0.98
LRRK1-205ENST00000526457 ATP11AP98196 1134 aa8.9□□□□□ -0.98
LRRK1-205ENST00000526457 SAMD1Q6SPF0 538 aaPredicted RBP8.9□□□□□ -0.98
LRRK1-205ENST00000526457 RPAINQ86UA6 219 aa8.9□□□□□ -0.98
LRRK1-205ENST00000526457 SMC6Q96SB8 1091 aa8.9□□□□□ -0.98
LRRK1-205ENST00000526457 GNG11P61952 73 aa8.9□□□□□ -0.98
LRRK1-205ENST00000526457 GRIPAP1Q4V328 841 aa8.9□□□□□ -0.98
LRRK1-205ENST00000526457 PPP1R12BO60237 982 aaPredicted RBP8.9□□□□□ -0.98
LRRK1-205ENST00000526457 PPP6R1Q9UPN7 881 aa8.9□□□□□ -0.98
LRRK1-205ENST00000526457 CKAP4Q07065 602 aaKnown RBP8.9□□□□□ -0.99
LRRK1-205ENST00000526457 CCDC150Q8NCX0 1101 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms