RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 EMILIN1Q9Y6C2 1016 aa23.16■■□□□ 1.3
CCS-204ENST00000526066 SSFA2P28290 1259 aa23.15■■□□□ 1.3
CCS-204ENST00000526066 MTHFSP49914 203 aa23.15■■□□□ 1.3
CCS-204ENST00000526066 TMOD3Q9NYL9 352 aa23.15■■□□□ 1.3
CCS-204ENST00000526066 PIGBQ92521 554 aa23.14■■□□□ 1.29
CCS-204ENST00000526066 IGSF1Q8N6C5 1336 aa23.13■■□□□ 1.29
CCS-204ENST00000526066 MAP2P11137 1827 aaKnown RBP23.12■■□□□ 1.29
CCS-204ENST00000526066 LOC102724428A0A0B4J2F2 783 aa23.12■■□□□ 1.29
CCS-204ENST00000526066 SIK1P57059 783 aa23.12■■□□□ 1.29
CCS-204ENST00000526066 ZNF526Q8TF50 670 aaPredicted RBP23.12■■□□□ 1.29
CCS-204ENST00000526066 NKX1-1Q15270 411 aaPredicted RBP23.11■■□□□ 1.29
CCS-204ENST00000526066 MIER1Q8N108 512 aa23.11■■□□□ 1.29
CCS-204ENST00000526066 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.11■■□□□ 1.29
CCS-204ENST00000526066 GNPATO15228 680 aa23.1■■□□□ 1.29
CCS-204ENST00000526066 NCAPD2Q15021 1401 aa23.09■■□□□ 1.29
CCS-204ENST00000526066 CCER2I3L3R5 266 aa23.09■■□□□ 1.29
CCS-204ENST00000526066 IFNL2Q8IZJ0 200 aa23.09■■□□□ 1.29
CCS-204ENST00000526066 CFAP53Q96M91 514 aa23.09■■□□□ 1.29
CCS-204ENST00000526066 WWC3Q9ULE0 1092 aa23.09■■□□□ 1.29
CCS-204ENST00000526066 CEP350Q5VT06 3117 aa23.08■■□□□ 1.29
CCS-204ENST00000526066 ATP6V1AP38606 617 aa23.08■■□□□ 1.29
CCS-204ENST00000526066 LINC00116Q8NCU8 138 aa23.08■■□□□ 1.29
CCS-204ENST00000526066 ADCY9O60503 1353 aa23.08■■□□□ 1.29
CCS-204ENST00000526066 AMIGO3Q86WK7 504 aa23.06■■□□□ 1.28
CCS-204ENST00000526066 EYA1Q99502 592 aa23.06■■□□□ 1.28
CCS-204ENST00000526066 COL3A1P02461 1466 aaPredicted RBP23.05■■□□□ 1.28
CCS-204ENST00000526066 SMIM5Q71RC9 77 aa23.05■■□□□ 1.28
CCS-204ENST00000526066 ASAP1Q9ULH1 1129 aa23.05■■□□□ 1.28
CCS-204ENST00000526066 PHKG2P15735 406 aa23.04■■□□□ 1.28
CCS-204ENST00000526066 HSPA6P17066 643 aa23.04■■□□□ 1.28
CCS-204ENST00000526066 MMP10P09238 476 aa23.02■■□□□ 1.28
CCS-204ENST00000526066 ITPK1Q13572 414 aa23.02■■□□□ 1.28
CCS-204ENST00000526066 RTCBQ9Y3I0 505 aaKnown RBP23.02■■□□□ 1.28
CCS-204ENST00000526066 PLEKHG2Q9H7P9 1386 aa23.01■■□□□ 1.27
CCS-204ENST00000526066 DIAPH1O60610 1272 aaKnown RBP23.01■■□□□ 1.27
CCS-204ENST00000526066 CCDC184Q52MB2 194 aa23.01■■□□□ 1.27
CCS-204ENST00000526066 MRS2Q9HD23 443 aa23.01■■□□□ 1.27
CCS-204ENST00000526066 HSP90AB1P08238 724 aaKnown RBP23■■□□□ 1.27
CCS-204ENST00000526066 TRAPPC3LQ5T215 181 aa23■■□□□ 1.27
CCS-204ENST00000526066 NLGN1Q8N2Q7 840 aa23■■□□□ 1.27
CCS-204ENST00000526066 IL13P35225 146 aa22.99■■□□□ 1.27
CCS-204ENST00000526066 EIF4A2Q14240 407 aaKnown RBP22.99■■□□□ 1.27
CCS-204ENST00000526066 RBM42Q9BTD8 480 aaKnown RBP22.99■■□□□ 1.27
CCS-204ENST00000526066 ATG3Q9NT62 314 aa22.99■■□□□ 1.27
CCS-204ENST00000526066 CICQ96RK0 1608 aaPredicted RBP22.97■■□□□ 1.27
CCS-204ENST00000526066 TGFB2P61812 414 aa22.97■■□□□ 1.27
CCS-204ENST00000526066 NUDCQ9Y266 331 aa22.97■■□□□ 1.27
CCS-204ENST00000526066 KIF13BQ9NQT8 1826 aa22.96■■□□□ 1.27
CCS-204ENST00000526066 ERVV-2B6SEH9 535 aa22.96■■□□□ 1.27
CCS-204ENST00000526066 ADRA2BP18089 450 aa22.96■■□□□ 1.27
CCS-204ENST00000526066 DCAF5Q96JK2 942 aa22.96■■□□□ 1.27
CCS-204ENST00000526066 CCDC87Q9NVE4 849 aa22.96■■□□□ 1.27
CCS-204ENST00000526066 BCS1LQ9Y276 419 aa22.96■■□□□ 1.27
CCS-204ENST00000526066 PXDNLA1KZ92 1463 aa22.95■■□□□ 1.26
CCS-204ENST00000526066 RFC4P35249 363 aa22.95■■□□□ 1.26
CCS-204ENST00000526066 PLEKHO1Q53GL0 409 aaPredicted RBP22.95■■□□□ 1.26
CCS-204ENST00000526066 ZNF831Q5JPB2 1677 aa22.95■■□□□ 1.26
CCS-204ENST00000526066 N4BP2Q86UW6 1770 aaPredicted RBP22.94■■□□□ 1.26
CCS-204ENST00000526066 KDRP35968 1356 aa22.94■■□□□ 1.26
CCS-204ENST00000526066 PNISRQ8TF01 805 aaKnown RBP22.94■■□□□ 1.26
CCS-204ENST00000526066 PARP3Q9Y6F1 533 aa22.94■■□□□ 1.26
CCS-204ENST00000526066 CABP4P57796 275 aa22.93■■□□□ 1.26
CCS-204ENST00000526066 RC3H1Q5TC82 1133 aaKnown RBP22.93■■□□□ 1.26
CCS-204ENST00000526066 CNTNAP4Q9C0A0 1308 aa22.92■■□□□ 1.26
CCS-204ENST00000526066 ARHGAP27Q6ZUM4 889 aa22.92■■□□□ 1.26
CCS-204ENST00000526066 C10orf71Q711Q0 1435 aa22.91■■□□□ 1.26
CCS-204ENST00000526066 C4AP0C0L4 1744 aa22.91■■□□□ 1.26
CCS-204ENST00000526066 COL5A3P25940 1745 aaPredicted RBP22.91■■□□□ 1.26
CCS-204ENST00000526066 A0A0G2JLW4 131 aa22.91■■□□□ 1.26
CCS-204ENST00000526066 KIF3CO14782 793 aa22.91■■□□□ 1.26
CCS-204ENST00000526066 AMOTQ4VCS5 1084 aa22.91■■□□□ 1.26
CCS-204ENST00000526066 C1orf141Q5JVX7 400 aa22.91■■□□□ 1.26
CCS-204ENST00000526066 ZNF530Q6P9A1 599 aaPredicted RBP22.91■■□□□ 1.26
CCS-204ENST00000526066 FCHSD2O94868 740 aa22.9■■□□□ 1.26
CCS-204ENST00000526066 WDR43Q15061 677 aaKnown RBP eCLIP22.9■■□□□ 1.26
CCS-204ENST00000526066 ARHGEF1Q92888 912 aaKnown RBP22.9■■□□□ 1.26
CCS-204ENST00000526066 U2SURPO15042 1029 aaKnown RBP22.89■■□□□ 1.25
CCS-204ENST00000526066 RPS6KA4O75676 772 aa22.89■■□□□ 1.25
CCS-204ENST00000526066 APLP1P51693 650 aa22.89■■□□□ 1.25
CCS-204ENST00000526066 KIAA1551Q9HCM1 1747 aa22.88■■□□□ 1.25
CCS-204ENST00000526066 TOMM70O94826 608 aa22.87■■□□□ 1.25
CCS-204ENST00000526066 U2AF1L5P0DN76 240 aaPredicted RBP22.87■■□□□ 1.25
CCS-204ENST00000526066 GYS1P13807 737 aa22.87■■□□□ 1.25
CCS-204ENST00000526066 U2AF1Q01081 240 aaKnown RBP eCLIP22.87■■□□□ 1.25
CCS-204ENST00000526066 DPEP1P16444 411 aa22.86■■□□□ 1.25
CCS-204ENST00000526066 C16orf71Q8IYS4 520 aaPredicted RBP22.86■■□□□ 1.25
CCS-204ENST00000526066 PTCD1O75127 700 aaKnown RBP22.85■■□□□ 1.25
CCS-204ENST00000526066 SLC4A9Q96Q91 983 aa22.85■■□□□ 1.25
CCS-204ENST00000526066 KDM6AO15550 1401 aaPredicted RBP22.84■■□□□ 1.25
CCS-204ENST00000526066 SULT6B1Q6IMI4 303 aa22.84■■□□□ 1.25
CCS-204ENST00000526066 ADAMTS8Q9UP79 889 aa22.84■■□□□ 1.25
CCS-204ENST00000526066 PIM2Q9P1W9 311 aa22.83■■□□□ 1.25
CCS-204ENST00000526066 BRCA1P38398 1863 aaKnown RBP22.83■■□□□ 1.24
CCS-204ENST00000526066 ARFGEF1Q9Y6D6 1849 aa22.82■■□□□ 1.24
CCS-204ENST00000526066 AEBP1Q8IUX7 1158 aa22.82■■□□□ 1.24
CCS-204ENST00000526066 RSPH6AQ9H0K4 717 aa22.82■■□□□ 1.24
CCS-204ENST00000526066 PNNQ9H307 717 aaKnown RBP22.82■■□□□ 1.24
CCS-204ENST00000526066 HMOX1P09601 288 aa22.81■■□□□ 1.24
CCS-204ENST00000526066 CRKLP46109 303 aaKnown RBP22.81■■□□□ 1.24
CCS-204ENST00000526066 DALRD3Q5D0E6 543 aaKnown RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms