RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 UBAP2LQ14157 1087 aaKnown RBP9.94□□□□□ -0.82
CSDE1-210ENST00000525878 ACDQ96AP0 544 aa9.94□□□□□ -0.82
CSDE1-210ENST00000525878 SCARF2Q96GP6 870 aaPredicted RBP9.94□□□□□ -0.82
CSDE1-210ENST00000525878 IRS1P35568 1242 aa9.93□□□□□ -0.82
CSDE1-210ENST00000525878 MCM6Q14566 821 aa9.93□□□□□ -0.82
CSDE1-210ENST00000525878 C4orf17Q53FE4 359 aa9.93□□□□□ -0.82
CSDE1-210ENST00000525878 CFHR5Q9BXR6 569 aa9.93□□□□□ -0.82
CSDE1-210ENST00000525878 LRRC4BQ9NT99 713 aa9.93□□□□□ -0.82
CSDE1-210ENST00000525878 STAU1O95793 577 aaKnown RBP9.92□□□□□ -0.82
CSDE1-210ENST00000525878 PHKA2P46019 1235 aa9.92□□□□□ -0.82
CSDE1-210ENST00000525878 WASHC4Q2M389 1173 aa9.92□□□□□ -0.82
CSDE1-210ENST00000525878 KANK3Q6NY19 840 aa9.92□□□□□ -0.82
CSDE1-210ENST00000525878 PPARGC1BQ86YN6 1023 aaKnown RBP9.92□□□□□ -0.82
CSDE1-210ENST00000525878 SIRT1Q96EB6 747 aa9.92□□□□□ -0.82
CSDE1-210ENST00000525878 ENAMQ9NRM1 1142 aa9.92□□□□□ -0.82
CSDE1-210ENST00000525878 BCRP11274 1271 aa9.91□□□□□ -0.82
CSDE1-210ENST00000525878 MX2P20592 715 aa9.91□□□□□ -0.82
CSDE1-210ENST00000525878 ABL2P42684 1182 aa9.91□□□□□ -0.82
CSDE1-210ENST00000525878 SCNN1DP51172 638 aa9.91□□□□□ -0.82
CSDE1-210ENST00000525878 LBRQ14739 615 aaKnown RBP9.91□□□□□ -0.82
CSDE1-210ENST00000525878 GNASQ5JWF2 1037 aa9.91□□□□□ -0.82
CSDE1-210ENST00000525878 MAP7D1Q3KQU3 841 aa9.9□□□□□ -0.82
CSDE1-210ENST00000525878 OXLD1Q5BKU9 147 aa9.9□□□□□ -0.82
CSDE1-210ENST00000525878 TMEM214Q6NUQ4 689 aaKnown RBP9.9□□□□□ -0.82
CSDE1-210ENST00000525878 RHBDD1Q8TEB9 315 aa9.9□□□□□ -0.82
CSDE1-210ENST00000525878 DNMT3AQ9Y6K1 912 aaPredicted RBP9.9□□□□□ -0.82
CSDE1-210ENST00000525878 SOX11P35716 441 aa9.89□□□□□ -0.83
CSDE1-210ENST00000525878 GPAMQ9HCL2 828 aa9.89□□□□□ -0.83
CSDE1-210ENST00000525878 INHAP05111 366 aa9.88□□□□□ -0.83
CSDE1-210ENST00000525878 MSX1P28360 303 aa9.88□□□□□ -0.83
CSDE1-210ENST00000525878 PLPP7Q8NBV4 271 aa9.88□□□□□ -0.83
CSDE1-210ENST00000525878 NSFL1CQ9UNZ2 370 aaKnown RBP9.88□□□□□ -0.83
CSDE1-210ENST00000525878 GTF2E1P29083 439 aaPredicted RBP9.87□□□□□ -0.83
CSDE1-210ENST00000525878 MAP2K3P46734 347 aa9.87□□□□□ -0.83
CSDE1-210ENST00000525878 TLR1Q15399 786 aa9.87□□□□□ -0.83
CSDE1-210ENST00000525878 OIP5O43482 229 aa9.86□□□□□ -0.83
CSDE1-210ENST00000525878 SEMA3FQ13275 785 aa9.86□□□□□ -0.83
CSDE1-210ENST00000525878 CRISPLD1Q9H336 500 aa9.86□□□□□ -0.83
CSDE1-210ENST00000525878 RUBCNLQ9H714 662 aa9.86□□□□□ -0.83
CSDE1-210ENST00000525878 NDFIP2Q9NV92 336 aa9.86□□□□□ -0.83
CSDE1-210ENST00000525878 PHF24Q9UPV7 400 aa9.86□□□□□ -0.83
CSDE1-210ENST00000525878 CNTNAP5Q8WYK1 1306 aa9.85□□□□□ -0.83
CSDE1-210ENST00000525878 GDF10P55107 478 aa9.85□□□□□ -0.83
CSDE1-210ENST00000525878 ZNF295-AS1Q8N0V1 137 aa9.85□□□□□ -0.83
CSDE1-210ENST00000525878 OXCT2Q9BYC2 517 aaPredicted RBP9.85□□□□□ -0.83
CSDE1-210ENST00000525878 COG6Q9Y2V7 657 aa9.85□□□□□ -0.83
CSDE1-210ENST00000525878 CSB-PGBD3P0DP91 1061 aa9.84□□□□□ -0.83
CSDE1-210ENST00000525878 PGBD3Q8N328 593 aa9.84□□□□□ -0.83
CSDE1-210ENST00000525878 LOC100996750A0A140TA64 210 aa9.83□□□□□ -0.84
CSDE1-210ENST00000525878 SMTNP53814 917 aa9.83□□□□□ -0.84
CSDE1-210ENST00000525878 EFHC2Q5JST6 749 aa9.83□□□□□ -0.84
CSDE1-210ENST00000525878 BEND7Q8N7W2 519 aaPredicted RBP9.83□□□□□ -0.84
CSDE1-210ENST00000525878 NEDD1Q8NHV4 660 aa9.83□□□□□ -0.84
CSDE1-210ENST00000525878 KLRG1Q96E93 195 aa9.83□□□□□ -0.84
CSDE1-210ENST00000525878 SLC4A9Q96Q91 983 aa9.83□□□□□ -0.84
CSDE1-210ENST00000525878 KRTAP4-6Q9BYQ5 205 aa9.83□□□□□ -0.84
CSDE1-210ENST00000525878 ATXN7L1Q9ULK2 861 aaPredicted RBP9.83□□□□□ -0.84
CSDE1-210ENST00000525878 PHF20L1A8MW92 1017 aa9.82□□□□□ -0.84
CSDE1-210ENST00000525878 TMEM229AB2RXF0 380 aa9.82□□□□□ -0.84
CSDE1-210ENST00000525878 PIK3CDO00329 1044 aa9.82□□□□□ -0.84
CSDE1-210ENST00000525878 PRKCSHP14314 528 aaPredicted RBP9.82□□□□□ -0.84
CSDE1-210ENST00000525878 FOXK2Q01167 660 aa9.82□□□□□ -0.84
CSDE1-210ENST00000525878 SUZ12Q15022 739 aaKnown RBP9.82□□□□□ -0.84
CSDE1-210ENST00000525878 C1orf229Q6ZS94 237 aaPredicted RBP9.82□□□□□ -0.84
CSDE1-210ENST00000525878 DNAAF2Q9NVR5 837 aaKnown RBP9.82□□□□□ -0.84
CSDE1-210ENST00000525878 PCDHGA11Q9Y5H2 935 aa9.82□□□□□ -0.84
CSDE1-210ENST00000525878 C2CD2LO14523 706 aa9.81□□□□□ -0.84
CSDE1-210ENST00000525878 IGHA1P01876 353 aa9.81□□□□□ -0.84
CSDE1-210ENST00000525878 ATP4AP20648 1035 aa9.81□□□□□ -0.84
CSDE1-210ENST00000525878 MTFR1Q15390 333 aa9.81□□□□□ -0.84
CSDE1-210ENST00000525878 C1orf216Q8TAB5 229 aa9.81□□□□□ -0.84
CSDE1-210ENST00000525878 ALG2Q9H553 416 aa9.81□□□□□ -0.84
CSDE1-210ENST00000525878 IQSEC3Q9UPP2 1182 aaPredicted RBP9.81□□□□□ -0.84
CSDE1-210ENST00000525878 BNIP3LO60238 219 aa9.8□□□□□ -0.84
CSDE1-210ENST00000525878 PLA2G4AP47712 749 aa9.8□□□□□ -0.84
CSDE1-210ENST00000525878 NIFKQ9BYG3 293 aaKnown RBP9.8□□□□□ -0.84
CSDE1-210ENST00000525878 SHISA8B8ZZ34 492 aa9.79□□□□□ -0.84
CSDE1-210ENST00000525878 CDK2AP1O14519 115 aa9.79□□□□□ -0.84
CSDE1-210ENST00000525878 GPAT2Q6NUI2 795 aa9.79□□□□□ -0.84
CSDE1-210ENST00000525878 TBC1D9Q6ZT07 1266 aa9.79□□□□□ -0.84
CSDE1-210ENST00000525878 ABHD17AQ96GS6 310 aa9.79□□□□□ -0.84
CSDE1-210ENST00000525878 DCAF5Q96JK2 942 aa9.79□□□□□ -0.84
CSDE1-210ENST00000525878 GDF2Q9UK05 429 aaPredicted RBP9.79□□□□□ -0.84
CSDE1-210ENST00000525878 FGFR3P22607 806 aa9.78□□□□□ -0.84
CSDE1-210ENST00000525878 PODNQ7Z5L7 613 aa9.78□□□□□ -0.84
CSDE1-210ENST00000525878 NLRP8Q86W28 1048 aa9.78□□□□□ -0.84
CSDE1-210ENST00000525878 NFATC2IPQ8NCF5 419 aa9.78□□□□□ -0.84
CSDE1-210ENST00000525878 A6NJY4 79 aa9.77□□□□□ -0.85
CSDE1-210ENST00000525878 LZTS3O60299 673 aaPredicted RBP9.77□□□□□ -0.85
CSDE1-210ENST00000525878 ITGB2P05107 769 aa9.77□□□□□ -0.85
CSDE1-210ENST00000525878 SNRPNP63162 240 aaKnown RBP9.77□□□□□ -0.85
CSDE1-210ENST00000525878 CTBSQ01459 385 aa9.77□□□□□ -0.85
CSDE1-210ENST00000525878 GALNT6Q8NCL4 622 aa9.77□□□□□ -0.85
CSDE1-210ENST00000525878 ZCCHC2Q9C0B9 1178 aaKnown RBP9.77□□□□□ -0.85
CSDE1-210ENST00000525878 HCN2Q9UL51 889 aa9.77□□□□□ -0.85
CSDE1-210ENST00000525878 USP3Q9Y6I4 520 aa9.77□□□□□ -0.85
CSDE1-210ENST00000525878 FIGNL1Q6PIW4 674 aa9.76□□□□□ -0.85
CSDE1-210ENST00000525878 GOLGA6L1Q8N7Z2 621 aa9.76□□□□□ -0.85
CSDE1-210ENST00000525878 EDARADDQ8WWZ3 215 aa9.76□□□□□ -0.85
CSDE1-210ENST00000525878 POM121Q96HA1 1249 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms