RNA–Protein interactions for RNA: ENST00000524835.5

TM9SF1-203, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2 BASIC

Gene TM9SF1, Length 1,938 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-203ENST00000524835 C8orf34Q49A92 452 aa24.42■■□□□ 1.5
TM9SF1-203ENST00000524835 C1orf115Q9H7X2 142 aa24.42■■□□□ 1.5
TM9SF1-203ENST00000524835 PRDM11Q9NQV5 511 aa24.42■■□□□ 1.5
TM9SF1-203ENST00000524835 CACNA1FO60840 1977 aa24.42■■□□□ 1.5
TM9SF1-203ENST00000524835 PKD1L3Q7Z443 1732 aa24.42■■□□□ 1.5
TM9SF1-203ENST00000524835 BTBD11A6QL63 1104 aa24.41■■□□□ 1.5
TM9SF1-203ENST00000524835 KCNQ3O43525 872 aa24.4■■□□□ 1.5
TM9SF1-203ENST00000524835 HOXB7P09629 217 aa24.4■■□□□ 1.5
TM9SF1-203ENST00000524835 COL5A2P05997 1499 aaPredicted RBP24.4■■□□□ 1.5
TM9SF1-203ENST00000524835 SPG7Q9UQ90 795 aa24.39■■□□□ 1.5
TM9SF1-203ENST00000524835 KDM6AO15550 1401 aaPredicted RBP24.39■■□□□ 1.5
TM9SF1-203ENST00000524835 FLIIQ13045 1269 aa24.39■■□□□ 1.49
TM9SF1-203ENST00000524835 NECTIN2Q92692 538 aa24.39■■□□□ 1.49
TM9SF1-203ENST00000524835 WDR17Q8IZU2 1322 aa24.38■■□□□ 1.49
TM9SF1-203ENST00000524835 SCN11AQ9UI33 1791 aa24.38■■□□□ 1.49
TM9SF1-203ENST00000524835 PHKG2P15735 406 aa24.38■■□□□ 1.49
TM9SF1-203ENST00000524835 HDGFL1Q5TGJ6 251 aa24.38■■□□□ 1.49
TM9SF1-203ENST00000524835 SIRT2Q8IXJ6 389 aa24.38■■□□□ 1.49
TM9SF1-203ENST00000524835 LTBP4Q8N2S1 1624 aa24.37■■□□□ 1.49
TM9SF1-203ENST00000524835 F6X3S4 739 aa24.36■■□□□ 1.49
TM9SF1-203ENST00000524835 HEG1Q9ULI3 1381 aa24.36■■□□□ 1.49
TM9SF1-203ENST00000524835 ATP10DQ9P241 1426 aa24.36■■□□□ 1.49
TM9SF1-203ENST00000524835 ROBO1Q9Y6N7 1651 aa24.35■■□□□ 1.49
TM9SF1-203ENST00000524835 N4BP2Q86UW6 1770 aaPredicted RBP24.34■■□□□ 1.49
TM9SF1-203ENST00000524835 CCT4P50991 539 aaKnown RBP24.34■■□□□ 1.49
TM9SF1-203ENST00000524835 FKBP5Q13451 457 aaPredicted RBP24.33■■□□□ 1.49
TM9SF1-203ENST00000524835 IFNL2Q8IZJ0 200 aa24.33■■□□□ 1.49
TM9SF1-203ENST00000524835 MRC1P22897 1456 aa24.33■■□□□ 1.49
TM9SF1-203ENST00000524835 PARP4Q9UKK3 1724 aaKnown RBP24.33■■□□□ 1.49
TM9SF1-203ENST00000524835 CYP27B1O15528 508 aa24.33■■□□□ 1.49
TM9SF1-203ENST00000524835 MSH5O43196 834 aa24.33■■□□□ 1.49
TM9SF1-203ENST00000524835 NUCB1Q02818 461 aa24.33■■□□□ 1.49
TM9SF1-203ENST00000524835 MEIS3Q99687 375 aa24.33■■□□□ 1.49
TM9SF1-203ENST00000524835 PXDNLA1KZ92 1463 aa24.32■■□□□ 1.48
TM9SF1-203ENST00000524835 ANP32AP39687 249 aaKnown RBP24.32■■□□□ 1.48
TM9SF1-203ENST00000524835 AHDC1Q5TGY3 1603 aaPredicted RBP24.32■■□□□ 1.48
TM9SF1-203ENST00000524835 GCC1Q96CN9 775 aa24.32■■□□□ 1.48
TM9SF1-203ENST00000524835 SLC4A10Q6U841 1118 aa24.31■■□□□ 1.48
TM9SF1-203ENST00000524835 CHMP4AQ9BY43 222 aa24.31■■□□□ 1.48
TM9SF1-203ENST00000524835 SLC52A2Q9HAB3 445 aa24.31■■□□□ 1.48
TM9SF1-203ENST00000524835 EIF2S2P20042 333 aaKnown RBP24.3■■□□□ 1.48
TM9SF1-203ENST00000524835 TOM1L2Q6ZVM7 507 aa24.3■■□□□ 1.48
TM9SF1-203ENST00000524835 GIGYF1O75420 1035 aaPredicted RBP24.29■■□□□ 1.48
TM9SF1-203ENST00000524835 CHPF2Q9P2E5 772 aa24.29■■□□□ 1.48
TM9SF1-203ENST00000524835 ANKRD44Q8N8A2 993 aa24.29■■□□□ 1.48
TM9SF1-203ENST00000524835 DCAF5Q96JK2 942 aa24.29■■□□□ 1.48
TM9SF1-203ENST00000524835 PHAXQ9H814 394 aaKnown RBP24.29■■□□□ 1.48
TM9SF1-203ENST00000524835 CEP85Q6P2H3 762 aa24.27■■□□□ 1.48
TM9SF1-203ENST00000524835 CHD1LQ86WJ1 897 aa24.27■■□□□ 1.48
TM9SF1-203ENST00000524835 CARD10Q9BWT7 1032 aa24.27■■□□□ 1.48
TM9SF1-203ENST00000524835 RPAP2Q8IXW5 612 aaPredicted RBP24.27■■□□□ 1.48
TM9SF1-203ENST00000524835 NPM2Q86SE8 214 aaKnown RBP24.26■■□□□ 1.47
TM9SF1-203ENST00000524835 COL22A1Q8NFW1 1626 aaPredicted RBP24.26■■□□□ 1.47
TM9SF1-203ENST00000524835 HSP90AB1P08238 724 aaKnown RBP24.25■■□□□ 1.47
TM9SF1-203ENST00000524835 ZNF790Q6PG37 636 aa24.25■■□□□ 1.47
TM9SF1-203ENST00000524835 NFATC2IPQ8NCF5 419 aa24.25■■□□□ 1.47
TM9SF1-203ENST00000524835 LNPKQ9C0E8 428 aa24.25■■□□□ 1.47
TM9SF1-203ENST00000524835 LARP1Q6PKG0 1096 aaKnown RBP24.24■■□□□ 1.47
TM9SF1-203ENST00000524835 PRAMEF22A3QJZ6 481 aa24.23■■□□□ 1.47
TM9SF1-203ENST00000524835 DBF4Q9UBU7 674 aaPredicted RBP24.23■■□□□ 1.47
TM9SF1-203ENST00000524835 SLC39A6Q13433 755 aa24.23■■□□□ 1.47
TM9SF1-203ENST00000524835 IPO9Q96P70 1041 aaKnown RBP24.23■■□□□ 1.47
TM9SF1-203ENST00000524835 DCTPP1Q9H773 170 aa24.23■■□□□ 1.47
TM9SF1-203ENST00000524835 PCDH11XQ9BZA7 1347 aa24.23■■□□□ 1.47
TM9SF1-203ENST00000524835 PCDH11YQ9BZA8 1340 aa24.23■■□□□ 1.47
TM9SF1-203ENST00000524835 SHANK3Q9BYB0 1731 aa24.22■■□□□ 1.47
TM9SF1-203ENST00000524835 ANKRD45Q5TZF3 282 aa24.22■■□□□ 1.47
TM9SF1-203ENST00000524835 ZCRB1Q8TBF4 217 aaKnown RBP24.22■■□□□ 1.47
TM9SF1-203ENST00000524835 STRN4Q9NRL3 753 aa24.22■■□□□ 1.47
TM9SF1-203ENST00000524835 C5P01031 1676 aa24.22■■□□□ 1.47
TM9SF1-203ENST00000524835 ANXA1P04083 346 aa24.21■■□□□ 1.47
TM9SF1-203ENST00000524835 IL2RBP14784 551 aa24.21■■□□□ 1.47
TM9SF1-203ENST00000524835 COL14A1Q05707 1796 aaKnown RBP24.2■■□□□ 1.46
TM9SF1-203ENST00000524835 COL16A1Q07092 1604 aaPredicted RBP24.2■■□□□ 1.46
TM9SF1-203ENST00000524835 GNAI3P08754 354 aa24.2■■□□□ 1.46
TM9SF1-203ENST00000524835 EVA1CP58658 441 aa24.2■■□□□ 1.46
TM9SF1-203ENST00000524835 GNAI2P04899 355 aa24.19■■□□□ 1.46
TM9SF1-203ENST00000524835 PROSER3Q2NL68 480 aa24.19■■□□□ 1.46
TM9SF1-203ENST00000524835 ADCY9O60503 1353 aa24.19■■□□□ 1.46
TM9SF1-203ENST00000524835 ZNF496Q96IT1 587 aaPredicted RBP24.18■■□□□ 1.46
TM9SF1-203ENST00000524835 GLI3P10071 1580 aa24.17■■□□□ 1.46
TM9SF1-203ENST00000524835 PI4KAP2A4QPH2 592 aa24.17■■□□□ 1.46
TM9SF1-203ENST00000524835 PI4KAP1Q8N8J0 262 aa24.17■■□□□ 1.46
TM9SF1-203ENST00000524835 DNAAF4Q8WXU2 420 aa24.17■■□□□ 1.46
TM9SF1-203ENST00000524835 USP44Q9H0E7 712 aa24.17■■□□□ 1.46
TM9SF1-203ENST00000524835 BTG4Q9NY30 223 aa24.17■■□□□ 1.46
TM9SF1-203ENST00000524835 SEC24BO95487 1268 aa24.16■■□□□ 1.46
TM9SF1-203ENST00000524835 CABP4P57796 275 aa24.16■■□□□ 1.46
TM9SF1-203ENST00000524835 NKX1-1Q15270 411 aaPredicted RBP24.16■■□□□ 1.46
TM9SF1-203ENST00000524835 SRCIN1Q9C0H9 1055 aa24.16■■□□□ 1.46
TM9SF1-203ENST00000524835 PDIA6Q15084 440 aa24.15■■□□□ 1.46
TM9SF1-203ENST00000524835 BEND3Q5T5X7 828 aa24.15■■□□□ 1.46
TM9SF1-203ENST00000524835 DDX21Q9NR30 783 aaKnown RBP eCLIP24.15■■□□□ 1.46
TM9SF1-203ENST00000524835 HYPKQ9NX55 129 aa24.15■■□□□ 1.46
TM9SF1-203ENST00000524835 HMMRO75330 724 aa24.14■■□□□ 1.46
TM9SF1-203ENST00000524835 TTC5Q8N0Z6 440 aa24.14■■□□□ 1.45
TM9SF1-203ENST00000524835 PHLPP1O60346 1717 aa24.13■■□□□ 1.45
TM9SF1-203ENST00000524835 ERVV-2B6SEH9 535 aa24.12■■□□□ 1.45
TM9SF1-203ENST00000524835 FMNL2Q96PY5 1086 aa24.12■■□□□ 1.45
TM9SF1-203ENST00000524835 PAPPAQ13219 1627 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms