RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 WWC1Q8IX03 1113 aa4.96□□□□□ -1.62
LINC01339-204ENST00000524094 MPNDQ8N594 471 aa4.96□□□□□ -1.62
LINC01339-204ENST00000524094 ACDQ96AP0 544 aa4.96□□□□□ -1.62
LINC01339-204ENST00000524094 ITPKCQ96DU7 683 aa4.96□□□□□ -1.62
LINC01339-204ENST00000524094 CEP126Q9P2H0 1117 aa4.96□□□□□ -1.62
LINC01339-204ENST00000524094 IGF1RP08069 1367 aa4.95□□□□□ -1.62
LINC01339-204ENST00000524094 ATP9BO43861 1147 aa4.95□□□□□ -1.62
LINC01339-204ENST00000524094 FAM69CQ0P6D2 419 aa4.95□□□□□ -1.62
LINC01339-204ENST00000524094 C4orf48Q5BLP8 95 aa4.95□□□□□ -1.62
LINC01339-204ENST00000524094 PDXDC2PQ6P474 469 aa4.95□□□□□ -1.62
LINC01339-204ENST00000524094 SH3BP5LQ7L8J4 393 aa4.95□□□□□ -1.62
LINC01339-204ENST00000524094 LRRC4BQ9NT99 713 aa4.95□□□□□ -1.62
LINC01339-204ENST00000524094 ZMIZ1Q9ULJ6 1067 aa4.95□□□□□ -1.62
LINC01339-204ENST00000524094 CCNYL3P0C7X3 344 aa4.94□□□□□ -1.62
LINC01339-204ENST00000524094 MEIOBQ8N635 442 aa4.94□□□□□ -1.62
LINC01339-204ENST00000524094 MBIPQ9NS73 344 aa4.94□□□□□ -1.62
LINC01339-204ENST00000524094 ZBTB7BO15156 539 aaPredicted RBP4.93□□□□□ -1.62
LINC01339-204ENST00000524094 SEMA3FQ13275 785 aa4.93□□□□□ -1.62
LINC01339-204ENST00000524094 NKAPLQ5M9Q1 402 aa4.93□□□□□ -1.62
LINC01339-204ENST00000524094 NFATC2IPQ8NCF5 419 aa4.93□□□□□ -1.62
LINC01339-204ENST00000524094 NUDT12Q9BQG2 462 aa4.93□□□□□ -1.62
LINC01339-204ENST00000524094 GPSM3Q9Y4H4 160 aa4.93□□□□□ -1.62
LINC01339-204ENST00000524094 ACIN1Q9UKV3 1341 aaKnown RBP4.93□□□□□ -1.62
LINC01339-204ENST00000524094 ZC3H4Q9UPT8 1303 aaKnown RBP4.93□□□□□ -1.62
LINC01339-204ENST00000524094 EIF4G2P78344 907 aaKnown RBP eCLIP4.92□□□□□ -1.62
LINC01339-204ENST00000524094 JAG1P78504 1218 aa4.92□□□□□ -1.62
LINC01339-204ENST00000524094 ELOAQ14241 798 aaKnown RBP4.92□□□□□ -1.62
LINC01339-204ENST00000524094 AEBP1Q8IUX7 1158 aa4.92□□□□□ -1.62
LINC01339-204ENST00000524094 PLEKHM2Q8IWE5 1019 aa4.92□□□□□ -1.62
LINC01339-204ENST00000524094 RGS22Q8NE09 1264 aa4.92□□□□□ -1.62
LINC01339-204ENST00000524094 SUV39H2Q9H5I1 410 aa4.92□□□□□ -1.62
LINC01339-204ENST00000524094 DYRK3O43781 588 aa4.91□□□□□ -1.62
LINC01339-204ENST00000524094 CTHP32929 405 aa4.91□□□□□ -1.62
LINC01339-204ENST00000524094 GATA4P43694 442 aa4.91□□□□□ -1.62
LINC01339-204ENST00000524094 CRTC2Q53ET0 693 aaPredicted RBP4.91□□□□□ -1.62
LINC01339-204ENST00000524094 PRSS36Q5K4E3 855 aa4.91□□□□□ -1.62
LINC01339-204ENST00000524094 LCE5AQ5TCM9 118 aa4.91□□□□□ -1.62
LINC01339-204ENST00000524094 ADAM32Q8TC27 787 aa4.91□□□□□ -1.62
LINC01339-204ENST00000524094 CCDC85AQ96PX6 553 aaPredicted RBP4.91□□□□□ -1.62
LINC01339-204ENST00000524094 UNC93B1Q9H1C4 597 aa4.91□□□□□ -1.62
LINC01339-204ENST00000524094 USTQ9Y2C2 406 aa4.91□□□□□ -1.62
LINC01339-204ENST00000524094 USP17L3A6NCW0 530 aa4.9□□□□□ -1.63
LINC01339-204ENST00000524094 USP17L4A6NCW7 530 aa4.9□□□□□ -1.63
LINC01339-204ENST00000524094 OIP5O43482 229 aa4.9□□□□□ -1.63
LINC01339-204ENST00000524094 BRD1O95696 1058 aa4.9□□□□□ -1.63
LINC01339-204ENST00000524094 PTK7Q13308 1070 aa4.9□□□□□ -1.63
LINC01339-204ENST00000524094 USP17L2Q6R6M4 530 aa4.9□□□□□ -1.63
LINC01339-204ENST00000524094 USP17L1Q7RTZ2 530 aa4.9□□□□□ -1.63
LINC01339-204ENST00000524094 DEPDC4Q8N2C3 294 aa4.9□□□□□ -1.63
LINC01339-204ENST00000524094 STK32AQ8WU08 396 aa4.9□□□□□ -1.63
LINC01339-204ENST00000524094 BAP1Q92560 729 aa4.9□□□□□ -1.63
LINC01339-204ENST00000524094 GPKOWQ92917 476 aaPredicted RBP eCLIP4.9□□□□□ -1.63
LINC01339-204ENST00000524094 FOXJ1Q92949 421 aa4.9□□□□□ -1.63
LINC01339-204ENST00000524094 GZF1Q9H116 711 aaPredicted RBP4.9□□□□□ -1.63
LINC01339-204ENST00000524094 VRTNQ9H8Y1 702 aa4.9□□□□□ -1.63
LINC01339-204ENST00000524094 ZBTB7CA1YPR0 619 aa4.89□□□□□ -1.63
LINC01339-204ENST00000524094 USP17L5A8MUK1 530 aa4.89□□□□□ -1.63
LINC01339-204ENST00000524094 TMEM164Q5U3C3 297 aa4.89□□□□□ -1.63
LINC01339-204ENST00000524094 TSEN34Q9BSV6 310 aaKnown RBP4.89□□□□□ -1.63
LINC01339-204ENST00000524094 CDCA7Q9BWT1 371 aaPredicted RBP4.89□□□□□ -1.63
LINC01339-204ENST00000524094 GIGYF1O75420 1035 aaPredicted RBP4.88□□□□□ -1.63
LINC01339-204ENST00000524094 SKIP12755 728 aa4.88□□□□□ -1.63
LINC01339-204ENST00000524094 VARSP26640 1264 aaKnown RBP4.88□□□□□ -1.63
LINC01339-204ENST00000524094 CLDN10P78369 228 aa4.88□□□□□ -1.63
LINC01339-204ENST00000524094 PTK2Q05397 1052 aa4.88□□□□□ -1.63
LINC01339-204ENST00000524094 TXNDC2Q86VQ3 553 aa4.88□□□□□ -1.63
LINC01339-204ENST00000524094 C1QTNF2Q9BXJ5 285 aa4.88□□□□□ -1.63
LINC01339-204ENST00000524094 RRAGCQ9HB90 399 aa4.88□□□□□ -1.63
LINC01339-204ENST00000524094 MKRN1Q9UHC7 482 aaKnown RBP4.88□□□□□ -1.63
LINC01339-204ENST00000524094 ESPNB1AK53 854 aa4.87□□□□□ -1.63
LINC01339-204ENST00000524094 SCNN1AP37088 669 aa4.87□□□□□ -1.63
LINC01339-204ENST00000524094 NCOA4Q13772 614 aa4.87□□□□□ -1.63
LINC01339-204ENST00000524094 ERFEQ4G0M1 354 aa4.87□□□□□ -1.63
LINC01339-204ENST00000524094 NOM1Q5C9Z4 860 aaKnown RBP4.87□□□□□ -1.63
LINC01339-204ENST00000524094 PNMA1Q8ND90 353 aa4.87□□□□□ -1.63
LINC01339-204ENST00000524094 ARMC2Q8NEN0 867 aa4.87□□□□□ -1.63
LINC01339-204ENST00000524094 KIAA1024Q9UPX6 916 aa4.87□□□□□ -1.63
LINC01339-204ENST00000524094 RNF114Q9Y508 228 aa4.87□□□□□ -1.63
LINC01339-204ENST00000524094 PCDHGA11Q9Y5H2 935 aa4.87□□□□□ -1.63
LINC01339-204ENST00000524094 FAM196BA6NMK8 535 aa4.86□□□□□ -1.63
LINC01339-204ENST00000524094 SSFA2P28290 1259 aa4.86□□□□□ -1.63
LINC01339-204ENST00000524094 PLPP7Q8NBV4 271 aa4.86□□□□□ -1.63
LINC01339-204ENST00000524094 GNEQ9Y223 722 aaKnown RBP4.86□□□□□ -1.63
LINC01339-204ENST00000524094 NR3C2P08235 984 aa4.85□□□□□ -1.63
LINC01339-204ENST00000524094 CSB-PGBD3P0DP91 1061 aa4.85□□□□□ -1.63
LINC01339-204ENST00000524094 MCCD1P59942 119 aaPredicted RBP4.85□□□□□ -1.63
LINC01339-204ENST00000524094 KCNA1Q09470 495 aa4.85□□□□□ -1.63
LINC01339-204ENST00000524094 ZNF511Q8NB15 262 aa4.85□□□□□ -1.63
LINC01339-204ENST00000524094 ARHGAP9Q9BRR9 750 aa4.85□□□□□ -1.63
LINC01339-204ENST00000524094 NOVA2Q9UNW9 492 aaKnown RBP4.85□□□□□ -1.63
LINC01339-204ENST00000524094 PCDHB9Q9Y5E1 797 aa4.85□□□□□ -1.63
LINC01339-204ENST00000524094 SHISA8B8ZZ34 492 aa4.84□□□□□ -1.63
LINC01339-204ENST00000524094 USP17L15C9J2P7 530 aa4.84□□□□□ -1.63
LINC01339-204ENST00000524094 USP17L10C9JJH3 530 aa4.84□□□□□ -1.63
LINC01339-204ENST00000524094 USP17L13C9JLJ4 530 aa4.84□□□□□ -1.63
LINC01339-204ENST00000524094 USP17L12C9JPN9 530 aa4.84□□□□□ -1.63
LINC01339-204ENST00000524094 USP17L11C9JVI0 530 aa4.84□□□□□ -1.63
LINC01339-204ENST00000524094 USP17L21D6R901 530 aa4.84□□□□□ -1.63
LINC01339-204ENST00000524094 USP17L18D6R9N7 530 aa4.84□□□□□ -1.63
LINC01339-204ENST00000524094 USP17L22D6RA61 530 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms