RNA–Protein interactions for RNA: ENST00000524030.1

SLC38A9-225, Transcript of solute carrier family 38 member 9, humanhuman

TSL 3

Gene SLC38A9, Length 429 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-225ENST00000524030 GPBP1L1Q9HC44 474 aaPredicted RBP9.58□□□□□ -0.88
SLC38A9-225ENST00000524030 STRN4Q9NRL3 753 aa9.58□□□□□ -0.88
SLC38A9-225ENST00000524030 POTEB3A0JP26 581 aa9.57□□□□□ -0.88
SLC38A9-225ENST00000524030 TESPA1A2RU30 521 aaPredicted RBP9.57□□□□□ -0.88
SLC38A9-225ENST00000524030 FAM205CA6NFA0 338 aa9.57□□□□□ -0.88
SLC38A9-225ENST00000524030 WASLO00401 505 aaPredicted RBP9.57□□□□□ -0.88
SLC38A9-225ENST00000524030 ARSIQ5FYB1 569 aa9.57□□□□□ -0.88
SLC38A9-225ENST00000524030 POTEBQ6S5H4 581 aa9.57□□□□□ -0.88
SLC38A9-225ENST00000524030 PTCD2Q8WV60 388 aaKnown RBP9.57□□□□□ -0.88
SLC38A9-225ENST00000524030 TRAK1Q9UPV9 953 aa9.57□□□□□ -0.88
SLC38A9-225ENST00000524030 COL5A2P05997 1499 aaPredicted RBP9.56□□□□□ -0.88
SLC38A9-225ENST00000524030 FOXD4L5Q5VV16 416 aaPredicted RBP9.56□□□□□ -0.88
SLC38A9-225ENST00000524030 NGDNQ8NEJ9 315 aaKnown RBP9.56□□□□□ -0.88
SLC38A9-225ENST00000524030 FOXD4L4Q8WXT5 416 aaPredicted RBP9.56□□□□□ -0.88
SLC38A9-225ENST00000524030 KDM4CQ9H3R0 1056 aa9.56□□□□□ -0.88
SLC38A9-225ENST00000524030 USP35Q9P2H5 1018 aa9.56□□□□□ -0.88
SLC38A9-225ENST00000524030 PCDHGA4Q9Y5G9 962 aa9.56□□□□□ -0.88
SLC38A9-225ENST00000524030 POLR3AO14802 1390 aaPredicted RBP9.55□□□□□ -0.88
SLC38A9-225ENST00000524030 TRAK2O60296 914 aa9.55□□□□□ -0.88
SLC38A9-225ENST00000524030 BRD2P25440 801 aaKnown RBP9.55□□□□□ -0.88
SLC38A9-225ENST00000524030 ZC3H6P61129 1189 aaKnown RBP9.55□□□□□ -0.88
SLC38A9-225ENST00000524030 COL18A1P39060 1754 aa9.55□□□□□ -0.88
SLC38A9-225ENST00000524030 ERBB3P21860 1342 aa9.55□□□□□ -0.88
SLC38A9-225ENST00000524030 CPDO75976 1380 aa9.54□□□□□ -0.88
SLC38A9-225ENST00000524030 KCNQ2O43526 872 aa9.54□□□□□ -0.88
SLC38A9-225ENST00000524030 MFSD10Q14728 455 aa9.54□□□□□ -0.88
SLC38A9-225ENST00000524030 NUTM2GQ5VZR2 741 aa9.54□□□□□ -0.88
SLC38A9-225ENST00000524030 LARP1Q6PKG0 1096 aaKnown RBP9.54□□□□□ -0.88
SLC38A9-225ENST00000524030 SPON1Q9HCB6 807 aa9.54□□□□□ -0.88
SLC38A9-225ENST00000524030 ANO8Q9HCE9 1232 aaPredicted RBP9.54□□□□□ -0.88
SLC38A9-225ENST00000524030 PPP1R1BQ9UD71 204 aaPredicted RBP9.54□□□□□ -0.88
SLC38A9-225ENST00000524030 OVOS2A0A0G2JMS6 1433 aa9.54□□□□□ -0.88
SLC38A9-225ENST00000524030 OVOS2A0A0J9YW53 1432 aa9.54□□□□□ -0.88
SLC38A9-225ENST00000524030 OVOS2Q6IE36 1432 aa9.54□□□□□ -0.88
SLC38A9-225ENST00000524030 USP19O94966 1318 aa9.54□□□□□ -0.88
SLC38A9-225ENST00000524030 RGPD5Q99666 1765 aa9.53□□□□□ -0.88
SLC38A9-225ENST00000524030 PDE3BQ13370 1112 aa9.53□□□□□ -0.88
SLC38A9-225ENST00000524030 NBPF8Q3BBV2 869 aa9.53□□□□□ -0.88
SLC38A9-225ENST00000524030 PPP1R15BQ5SWA1 713 aa9.53□□□□□ -0.88
SLC38A9-225ENST00000524030 NBPF14Q5TI25 921 aa9.53□□□□□ -0.88
SLC38A9-225ENST00000524030 TCP11L2Q8N4U5 519 aa9.53□□□□□ -0.88
SLC38A9-225ENST00000524030 ZNF428Q96B54 188 aa9.53□□□□□ -0.88
SLC38A9-225ENST00000524030 GZF1Q9H116 711 aaPredicted RBP9.53□□□□□ -0.88
SLC38A9-225ENST00000524030 SLIT3O75094 1523 aa9.52□□□□□ -0.88
SLC38A9-225ENST00000524030 PIK3C2AO00443 1686 aa9.52□□□□□ -0.89
SLC38A9-225ENST00000524030 KIAA1210Q9ULL0 1709 aa9.52□□□□□ -0.89
SLC38A9-225ENST00000524030 QRICH2Q9H0J4 1663 aa9.51□□□□□ -0.89
SLC38A9-225ENST00000524030 CRB1P82279 1406 aa9.51□□□□□ -0.89
SLC38A9-225ENST00000524030 ZNF316A6NFI3 1004 aaPredicted RBP9.51□□□□□ -0.89
SLC38A9-225ENST00000524030 KHSRPQ92945 711 aaKnown RBP eCLIP9.51□□□□□ -0.89
SLC38A9-225ENST00000524030 NUDT16Q96DE0 195 aaKnown RBP9.51□□□□□ -0.89
SLC38A9-225ENST00000524030 PDGFDQ9GZP0 370 aaPredicted RBP9.51□□□□□ -0.89
SLC38A9-225ENST00000524030 PAPPAQ13219 1627 aa9.51□□□□□ -0.89
SLC38A9-225ENST00000524030 EVA1CP58658 441 aa9.5□□□□□ -0.89
SLC38A9-225ENST00000524030 VARS2Q5ST30 1063 aaKnown RBP9.5□□□□□ -0.89
SLC38A9-225ENST00000524030 SMYD5Q6GMV2 418 aa9.5□□□□□ -0.89
SLC38A9-225ENST00000524030 PTF1AQ7RTS3 328 aa9.5□□□□□ -0.89
SLC38A9-225ENST00000524030 DDX27Q96GQ7 796 aaKnown RBP9.5□□□□□ -0.89
SLC38A9-225ENST00000524030 NHSQ6T4R5 1651 aa9.5□□□□□ -0.89
SLC38A9-225ENST00000524030 ACEP12821 1306 aa9.5□□□□□ -0.89
SLC38A9-225ENST00000524030 TBC1D12O60347 775 aa9.49□□□□□ -0.89
SLC38A9-225ENST00000524030 ZNF784Q8NCA9 323 aaPredicted RBP9.49□□□□□ -0.89
SLC38A9-225ENST00000524030 OXER1Q8TDS5 423 aa9.49□□□□□ -0.89
SLC38A9-225ENST00000524030 LARP6Q9BRS8 491 aaKnown RBP9.49□□□□□ -0.89
SLC38A9-225ENST00000524030 THRAP3Q9Y2W1 955 aaKnown RBP9.49□□□□□ -0.89
SLC38A9-225ENST00000524030 NUDT7P0C024 238 aa9.48□□□□□ -0.89
SLC38A9-225ENST00000524030 PTGER2P43116 358 aa9.48□□□□□ -0.89
SLC38A9-225ENST00000524030 ZNF687Q8N1G0 1237 aa9.48□□□□□ -0.89
SLC38A9-225ENST00000524030 SERPINA10Q9UK55 444 aa9.48□□□□□ -0.89
SLC38A9-225ENST00000524030 CEP350Q5VT06 3117 aa9.48□□□□□ -0.89
SLC38A9-225ENST00000524030 RAB3GAP2Q9H2M9 1393 aa9.48□□□□□ -0.89
SLC38A9-225ENST00000524030 GOLGB1Q14789 3259 aaKnown RBP9.48□□□□□ -0.89
SLC38A9-225ENST00000524030 BCL9O00512 1426 aa9.48□□□□□ -0.89
SLC38A9-225ENST00000524030 PPIP5K1Q6PFW1 1433 aa9.48□□□□□ -0.89
SLC38A9-225ENST00000524030 TUBGCP6Q96RT7 1819 aa9.47□□□□□ -0.89
SLC38A9-225ENST00000524030 TRPM1Q7Z4N2 1603 aa9.47□□□□□ -0.89
SLC38A9-225ENST00000524030 PATL2C9JE40 543 aaKnown RBP9.47□□□□□ -0.89
SLC38A9-225ENST00000524030 PLSCR1O15162 318 aa9.47□□□□□ -0.89
SLC38A9-225ENST00000524030 ZBTB7AO95365 584 aa9.47□□□□□ -0.89
SLC38A9-225ENST00000524030 ABTB2Q8N961 1025 aa9.47□□□□□ -0.89
SLC38A9-225ENST00000524030 CDK19Q9BWU1 502 aa9.47□□□□□ -0.89
SLC38A9-225ENST00000524030 KRTAP3-3Q9BYR6 98 aa9.47□□□□□ -0.89
SLC38A9-225ENST00000524030 KRTAP3-2Q9BYR7 98 aa9.47□□□□□ -0.89
SLC38A9-225ENST00000524030 BTAF1O14981 1849 aa9.47□□□□□ -0.89
SLC38A9-225ENST00000524030 COL24A1Q17RW2 1714 aa9.46□□□□□ -0.89
SLC38A9-225ENST00000524030 QSER1Q2KHR3 1735 aa9.46□□□□□ -0.89
SLC38A9-225ENST00000524030 PLEKHG3A1L390 1219 aa9.46□□□□□ -0.9
SLC38A9-225ENST00000524030 DCAF11Q8TEB1 546 aa9.46□□□□□ -0.9
SLC38A9-225ENST00000524030 AATKQ6ZMQ8 1374 aa9.46□□□□□ -0.9
SLC38A9-225ENST00000524030 USP6P35125 1406 aa9.46□□□□□ -0.9
SLC38A9-225ENST00000524030 C11orf95C9JLR9 678 aaPredicted RBP9.45□□□□□ -0.9
SLC38A9-225ENST00000524030 SEMA3EO15041 775 aa9.45□□□□□ -0.9
SLC38A9-225ENST00000524030 GCP02774 474 aa9.45□□□□□ -0.9
SLC38A9-225ENST00000524030 LHX6Q9UPM6 363 aa9.45□□□□□ -0.9
SLC38A9-225ENST00000524030 CPSF1Q10570 1443 aaKnown RBP9.45□□□□□ -0.9
SLC38A9-225ENST00000524030 ABCC6O95255 1503 aa9.45□□□□□ -0.9
SLC38A9-225ENST00000524030 SHANK3Q9BYB0 1731 aa9.45□□□□□ -0.9
SLC38A9-225ENST00000524030 SENP3-EIF4A1A0A087X0R7 540 aa9.44□□□□□ -0.9
SLC38A9-225ENST00000524030 DDB1Q16531 1140 aa9.44□□□□□ -0.9
SLC38A9-225ENST00000524030 UBE2Q2Q8WVN8 375 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms