RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-213ENST00000523655 MAP7D1Q3KQU3 841 aa9.31□□□□□ -0.92
SREK1-213ENST00000523655 HDGFL1Q5TGJ6 251 aa9.31□□□□□ -0.92
SREK1-213ENST00000523655 ZNF385CQ66K41 422 aaPredicted RBP9.31□□□□□ -0.92
SREK1-213ENST00000523655 PCDHGA11Q9Y5H2 935 aa9.31□□□□□ -0.92
SREK1-213ENST00000523655 USP3Q9Y6I4 520 aa9.31□□□□□ -0.92
SREK1-213ENST00000523655 TMEM229AB2RXF0 380 aa9.3□□□□□ -0.92
SREK1-213ENST00000523655 INHAP05111 366 aa9.3□□□□□ -0.92
SREK1-213ENST00000523655 ESCO1Q5FWF5 840 aa9.3□□□□□ -0.92
SREK1-213ENST00000523655 ADAMTS2O95450 1211 aa9.29□□□□□ -0.92
SREK1-213ENST00000523655 F11P03951 625 aa9.29□□□□□ -0.92
SREK1-213ENST00000523655 NCOA4Q13772 614 aa9.29□□□□□ -0.92
SREK1-213ENST00000523655 TBC1D9Q6ZT07 1266 aa9.29□□□□□ -0.92
SREK1-213ENST00000523655 UCN2Q96RP3 112 aa9.29□□□□□ -0.92
SREK1-213ENST00000523655 RUBCNLQ9H714 662 aa9.29□□□□□ -0.92
SREK1-213ENST00000523655 FAM181BA6NEQ2 426 aa9.28□□□□□ -0.92
SREK1-213ENST00000523655 GNASQ5JWF2 1037 aa9.28□□□□□ -0.92
SREK1-213ENST00000523655 SIRT1Q96EB6 747 aa9.28□□□□□ -0.92
SREK1-213ENST00000523655 USP17L5A8MUK1 530 aa9.27□□□□□ -0.93
SREK1-213ENST00000523655 SLURP2P0DP57 97 aa9.27□□□□□ -0.93
SREK1-213ENST00000523655 MSX1P28360 303 aa9.27□□□□□ -0.93
SREK1-213ENST00000523655 PLA2G4AP47712 749 aa9.27□□□□□ -0.93
SREK1-213ENST00000523655 WDR44Q5JSH3 913 aa9.27□□□□□ -0.93
SREK1-213ENST00000523655 LYPD4Q6UWN0 246 aa9.27□□□□□ -0.93
SREK1-213ENST00000523655 PPARGC1BQ86YN6 1023 aaKnown RBP9.27□□□□□ -0.93
SREK1-213ENST00000523655 WWC1Q8IX03 1113 aa9.27□□□□□ -0.93
SREK1-213ENST00000523655 NUCKS1Q9H1E3 243 aaKnown RBP9.27□□□□□ -0.93
SREK1-213ENST00000523655 GTF2IP78347 998 aa9.26□□□□□ -0.93
SREK1-213ENST00000523655 EML3Q32P44 896 aa9.26□□□□□ -0.93
SREK1-213ENST00000523655 SVOPQ8N4V2 548 aa9.26□□□□□ -0.93
SREK1-213ENST00000523655 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.26□□□□□ -0.93
SREK1-213ENST00000523655 SMTNP53814 917 aa9.25□□□□□ -0.93
SREK1-213ENST00000523655 FNBP4Q8N3X1 1017 aaPredicted RBP9.25□□□□□ -0.93
SREK1-213ENST00000523655 RHBDD1Q8TEB9 315 aa9.25□□□□□ -0.93
SREK1-213ENST00000523655 ADAMTS8Q9UP79 889 aa9.25□□□□□ -0.93
SREK1-213ENST00000523655 NOD1Q9Y239 953 aa9.25□□□□□ -0.93
SREK1-213ENST00000523655 H7C1W4 665 aa9.24□□□□□ -0.93
SREK1-213ENST00000523655 GTF2E1P29083 439 aaPredicted RBP9.24□□□□□ -0.93
SREK1-213ENST00000523655 KIAA1024Q9UPX6 916 aa9.24□□□□□ -0.93
SREK1-213ENST00000523655 PARP3Q9Y6F1 533 aa9.24□□□□□ -0.93
SREK1-213ENST00000523655 A0A1B0GTH6 734 aa9.23□□□□□ -0.93
SREK1-213ENST00000523655 PSME1Q06323 249 aa9.23□□□□□ -0.93
SREK1-213ENST00000523655 UBAP2LQ14157 1087 aaKnown RBP9.23□□□□□ -0.93
SREK1-213ENST00000523655 TBCELQ5QJ74 424 aa9.23□□□□□ -0.93
SREK1-213ENST00000523655 PROSER2Q86WR7 435 aaPredicted RBP9.23□□□□□ -0.93
SREK1-213ENST00000523655 AIDAQ96BJ3 306 aa9.23□□□□□ -0.93
SREK1-213ENST00000523655 IGF1RP08069 1367 aa9.23□□□□□ -0.93
SREK1-213ENST00000523655 ARHGEF15O94989 841 aa9.22□□□□□ -0.93
SREK1-213ENST00000523655 SRSF11Q05519 484 aaKnown RBP9.22□□□□□ -0.93
SREK1-213ENST00000523655 ZNF295-AS1Q8N0V1 137 aa9.22□□□□□ -0.93
SREK1-213ENST00000523655 MBIPQ9NS73 344 aa9.22□□□□□ -0.93
SREK1-213ENST00000523655 ZNF358Q9NW07 568 aa9.22□□□□□ -0.93
SREK1-213ENST00000523655 IQSEC3Q9UPP2 1182 aaPredicted RBP9.22□□□□□ -0.93
SREK1-213ENST00000523655 USP17L3A6NCW0 530 aa9.21□□□□□ -0.94
SREK1-213ENST00000523655 USP17L4A6NCW7 530 aa9.21□□□□□ -0.94
SREK1-213ENST00000523655 A6NJY4 79 aa9.21□□□□□ -0.94
SREK1-213ENST00000523655 ZBTB7BO15156 539 aaPredicted RBP9.21□□□□□ -0.94
SREK1-213ENST00000523655 CELA2BP08218 269 aaPredicted RBP9.21□□□□□ -0.94
SREK1-213ENST00000523655 FOXR1Q6PIV2 292 aa9.21□□□□□ -0.94
SREK1-213ENST00000523655 USP17L2Q6R6M4 530 aa9.21□□□□□ -0.94
SREK1-213ENST00000523655 USP17L1Q7RTZ2 530 aa9.21□□□□□ -0.94
SREK1-213ENST00000523655 NFATC2IPQ8NCF5 419 aa9.21□□□□□ -0.94
SREK1-213ENST00000523655 GMCL1Q96IK5 515 aa9.21□□□□□ -0.94
SREK1-213ENST00000523655 SLC4A9Q96Q91 983 aa9.21□□□□□ -0.94
SREK1-213ENST00000523655 ATP4AP20648 1035 aa9.2□□□□□ -0.94
SREK1-213ENST00000523655 CLDN10P78369 228 aa9.2□□□□□ -0.94
SREK1-213ENST00000523655 TNS4Q8IZW8 715 aa9.2□□□□□ -0.94
SREK1-213ENST00000523655 GLMNQ92990 594 aa9.2□□□□□ -0.94
SREK1-213ENST00000523655 ACDQ96AP0 544 aa9.2□□□□□ -0.94
SREK1-213ENST00000523655 TRERF1Q96PN7 1200 aa9.2□□□□□ -0.94
SREK1-213ENST00000523655 MX2P20592 715 aa9.19□□□□□ -0.94
SREK1-213ENST00000523655 GSK3AP49840 483 aa9.19□□□□□ -0.94
SREK1-213ENST00000523655 MTFR1Q15390 333 aa9.19□□□□□ -0.94
SREK1-213ENST00000523655 KLRG1Q96E93 195 aa9.19□□□□□ -0.94
SREK1-213ENST00000523655 ABHD17AQ96GS6 310 aa9.19□□□□□ -0.94
SREK1-213ENST00000523655 NIFKQ9BYG3 293 aaKnown RBP9.19□□□□□ -0.94
SREK1-213ENST00000523655 CABP1Q9NZU7 370 aa9.19□□□□□ -0.94
SREK1-213ENST00000523655 ABCC9O60706 1549 aa9.19□□□□□ -0.94
SREK1-213ENST00000523655 ATP9BO43861 1147 aa9.18□□□□□ -0.94
SREK1-213ENST00000523655 CSB-PGBD3P0DP91 1061 aa9.18□□□□□ -0.94
SREK1-213ENST00000523655 PGBD3Q8N328 593 aa9.18□□□□□ -0.94
SREK1-213ENST00000523655 TPCN2Q8NHX9 752 aa9.18□□□□□ -0.94
SREK1-213ENST00000523655 ZDHHC1Q8WTX9 485 aa9.18□□□□□ -0.94
SREK1-213ENST00000523655 TFIP11Q9UBB9 837 aaKnown RBP9.18□□□□□ -0.94
SREK1-213ENST00000523655 HCN2Q9UL51 889 aa9.18□□□□□ -0.94
SREK1-213ENST00000523655 CDK2AP1O14519 115 aa9.17□□□□□ -0.94
SREK1-213ENST00000523655 BNIP3LO60238 219 aa9.17□□□□□ -0.94
SREK1-213ENST00000523655 SH3PXD2AQ5TCZ1 1133 aa9.17□□□□□ -0.94
SREK1-213ENST00000523655 MKRN1Q9UHC7 482 aaKnown RBP9.17□□□□□ -0.94
SREK1-213ENST00000523655 TXLNAP40222 546 aa9.16□□□□□ -0.94
SREK1-213ENST00000523655 CTBSQ01459 385 aa9.16□□□□□ -0.94
SREK1-213ENST00000523655 PLEKHM2Q8IWE5 1019 aa9.16□□□□□ -0.94
SREK1-213ENST00000523655 DNAAF2Q9NVR5 837 aaKnown RBP9.16□□□□□ -0.94
SREK1-213ENST00000523655 C2CD2LO14523 706 aa9.15□□□□□ -0.94
SREK1-213ENST00000523655 LZTS3O60299 673 aaPredicted RBP9.15□□□□□ -0.94
SREK1-213ENST00000523655 LGR5O75473 907 aa9.15□□□□□ -0.94
SREK1-213ENST00000523655 EPHA4P54764 986 aa9.15□□□□□ -0.94
SREK1-213ENST00000523655 CCDC102BQ68D86 513 aa9.15□□□□□ -0.94
SREK1-213ENST00000523655 OGFOD1Q8N543 542 aa9.15□□□□□ -0.94
SREK1-213ENST00000523655 ZNF594Q96JF6 807 aaPredicted RBP9.15□□□□□ -0.94
SREK1-213ENST00000523655 ZCCHC2Q9C0B9 1178 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms