RNA–Protein interactions for RNA: ENST00000522767.1

AP003548.1-202, humanhuman

TSL 4 BASIC

Gene AP003548.1, Length 552 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003548.1-202ENST00000522767 KRT24Q2M2I5 525 aa13.34□□□□□ -0.27
AP003548.1-202ENST00000522767 TNNQ9UQP3 1299 aa13.34□□□□□ -0.27
AP003548.1-202ENST00000522767 COL16A1Q07092 1604 aaPredicted RBP13.33□□□□□ -0.28
AP003548.1-202ENST00000522767 LARP1Q6PKG0 1096 aaKnown RBP13.33□□□□□ -0.28
AP003548.1-202ENST00000522767 ZCRB1Q8TBF4 217 aaKnown RBP13.33□□□□□ -0.28
AP003548.1-202ENST00000522767 DCAF5Q96JK2 942 aa13.33□□□□□ -0.28
AP003548.1-202ENST00000522767 BTG4Q9NY30 223 aa13.33□□□□□ -0.28
AP003548.1-202ENST00000522767 VIRMAQ69YN4 1812 aaKnown RBP13.33□□□□□ -0.28
AP003548.1-202ENST00000522767 PTPRCP08575 1304 aa13.33□□□□□ -0.28
AP003548.1-202ENST00000522767 PCDH11XQ9BZA7 1347 aa13.33□□□□□ -0.28
AP003548.1-202ENST00000522767 PCDH11YQ9BZA8 1340 aa13.33□□□□□ -0.28
AP003548.1-202ENST00000522767 PKD1L3Q7Z443 1732 aa13.33□□□□□ -0.28
AP003548.1-202ENST00000522767 SOCS7O14512 581 aa13.32□□□□□ -0.28
AP003548.1-202ENST00000522767 SLC4A2P04920 1241 aa13.32□□□□□ -0.28
AP003548.1-202ENST00000522767 HOXB7P09629 217 aa13.32□□□□□ -0.28
AP003548.1-202ENST00000522767 TMEM57Q8N5G2 664 aa13.32□□□□□ -0.28
AP003548.1-202ENST00000522767 KDM3BQ7LBC6 1761 aa13.31□□□□□ -0.28
AP003548.1-202ENST00000522767 EIF4A1P60842 406 aaKnown RBP13.31□□□□□ -0.28
AP003548.1-202ENST00000522767 SLC52A2Q9HAB3 445 aa13.31□□□□□ -0.28
AP003548.1-202ENST00000522767 ADAMTS7Q9UKP4 1686 aa13.31□□□□□ -0.28
AP003548.1-202ENST00000522767 SCN11AQ9UI33 1791 aa13.3□□□□□ -0.28
AP003548.1-202ENST00000522767 CACNA1FO60840 1977 aa13.3□□□□□ -0.28
AP003548.1-202ENST00000522767 ABCC4O15439 1325 aa13.3□□□□□ -0.28
AP003548.1-202ENST00000522767 CYP27B1O15528 508 aa13.29□□□□□ -0.28
AP003548.1-202ENST00000522767 CABP4P57796 275 aa13.29□□□□□ -0.28
AP003548.1-202ENST00000522767 HDGFL1Q5TGJ6 251 aa13.29□□□□□ -0.28
AP003548.1-202ENST00000522767 RWDD1Q9H446 243 aaPredicted RBP13.29□□□□□ -0.28
AP003548.1-202ENST00000522767 NUTM2BA6NNL0 878 aaPredicted RBP13.28□□□□□ -0.28
AP003548.1-202ENST00000522767 NUTM2EB1AL46 878 aaPredicted RBP13.28□□□□□ -0.28
AP003548.1-202ENST00000522767 ADAMTS2O95450 1211 aa13.28□□□□□ -0.28
AP003548.1-202ENST00000522767 NUTM2AQ8IVF1 878 aaPredicted RBP13.28□□□□□ -0.28
AP003548.1-202ENST00000522767 KDM2BQ8NHM5 1336 aa13.28□□□□□ -0.28
AP003548.1-202ENST00000522767 KDM6AO15550 1401 aaPredicted RBP13.28□□□□□ -0.28
AP003548.1-202ENST00000522767 SIPA1L3O60292 1781 aaPredicted RBP13.27□□□□□ -0.28
AP003548.1-202ENST00000522767 ILDR2Q71H61 639 aa13.27□□□□□ -0.29
AP003548.1-202ENST00000522767 TTC5Q8N0Z6 440 aa13.27□□□□□ -0.29
AP003548.1-202ENST00000522767 NFATC2IPQ8NCF5 419 aa13.27□□□□□ -0.29
AP003548.1-202ENST00000522767 USP35Q9P2H5 1018 aa13.27□□□□□ -0.29
AP003548.1-202ENST00000522767 ERVV-2B6SEH9 535 aa13.26□□□□□ -0.29
AP003548.1-202ENST00000522767 KCNQ3O43525 872 aa13.26□□□□□ -0.29
AP003548.1-202ENST00000522767 EIF2S2P20042 333 aaKnown RBP13.26□□□□□ -0.29
AP003548.1-202ENST00000522767 INTS3Q68E01 1043 aaKnown RBP13.26□□□□□ -0.29
AP003548.1-202ENST00000522767 ZNF790Q6PG37 636 aa13.26□□□□□ -0.29
AP003548.1-202ENST00000522767 DDX54Q8TDD1 881 aaKnown RBP13.26□□□□□ -0.29
AP003548.1-202ENST00000522767 NECTIN2Q92692 538 aa13.26□□□□□ -0.29
AP003548.1-202ENST00000522767 ZBTB40Q9NUA8 1239 aa13.26□□□□□ -0.29
AP003548.1-202ENST00000522767 MRC1P22897 1456 aa13.25□□□□□ -0.29
AP003548.1-202ENST00000522767 JCADQ9P266 1359 aa13.25□□□□□ -0.29
AP003548.1-202ENST00000522767 CCT4P50991 539 aaKnown RBP13.25□□□□□ -0.29
AP003548.1-202ENST00000522767 FLIIQ13045 1269 aa13.25□□□□□ -0.29
AP003548.1-202ENST00000522767 FKBP5Q13451 457 aaPredicted RBP13.25□□□□□ -0.29
AP003548.1-202ENST00000522767 NKX1-1Q15270 411 aaPredicted RBP13.25□□□□□ -0.29
AP003548.1-202ENST00000522767 CDCA7Q9BWT1 371 aaPredicted RBP13.25□□□□□ -0.29
AP003548.1-202ENST00000522767 PCDHB15Q9Y5E8 787 aa13.25□□□□□ -0.29
AP003548.1-202ENST00000522767 PLCH1Q4KWH8 1693 aa13.24□□□□□ -0.29
AP003548.1-202ENST00000522767 ZBTB7BO15156 539 aaPredicted RBP13.24□□□□□ -0.29
AP003548.1-202ENST00000522767 GIGYF1O75420 1035 aaPredicted RBP13.24□□□□□ -0.29
AP003548.1-202ENST00000522767 DBF4Q9UBU7 674 aaPredicted RBP13.24□□□□□ -0.29
AP003548.1-202ENST00000522767 THRAP3Q9Y2W1 955 aaKnown RBP13.24□□□□□ -0.29
AP003548.1-202ENST00000522767 HEG1Q9ULI3 1381 aa13.23□□□□□ -0.29
AP003548.1-202ENST00000522767 EXOC5O00471 708 aa13.23□□□□□ -0.29
AP003548.1-202ENST00000522767 IGHDP01880 384 aa13.23□□□□□ -0.29
AP003548.1-202ENST00000522767 G2E3Q7L622 706 aa13.23□□□□□ -0.29
AP003548.1-202ENST00000522767 FMNL2Q96PY5 1086 aa13.23□□□□□ -0.29
AP003548.1-202ENST00000522767 SLC39A6Q13433 755 aa13.22□□□□□ -0.29
AP003548.1-202ENST00000522767 HDAC1Q13547 482 aaPredicted RBP13.22□□□□□ -0.29
AP003548.1-202ENST00000522767 SLC4A10Q6U841 1118 aa13.22□□□□□ -0.29
AP003548.1-202ENST00000522767 TSHZ2Q9NRE2 1034 aa13.22□□□□□ -0.29
AP003548.1-202ENST00000522767 NWD2Q9ULI1 1742 aa13.22□□□□□ -0.29
AP003548.1-202ENST00000522767 RGS12O14924 1447 aa13.22□□□□□ -0.29
AP003548.1-202ENST00000522767 SPATA31A6Q5VVP1 1343 aa13.21□□□□□ -0.29
AP003548.1-202ENST00000522767 SNRPA1P09661 255 aaKnown RBP13.21□□□□□ -0.29
AP003548.1-202ENST00000522767 HYPKQ9NX55 129 aa13.21□□□□□ -0.29
AP003548.1-202ENST00000522767 CHPF2Q9P2E5 772 aa13.21□□□□□ -0.29
AP003548.1-202ENST00000522767 CCDC9Q9Y3X0 531 aaKnown RBP13.21□□□□□ -0.29
AP003548.1-202ENST00000522767 DISP2A7MBM2 1401 aa13.21□□□□□ -0.3
AP003548.1-202ENST00000522767 SPATA31A1Q5TZJ5 1347 aa13.2□□□□□ -0.3
AP003548.1-202ENST00000522767 NRAPQ86VF7 1730 aa13.19□□□□□ -0.3
AP003548.1-202ENST00000522767 SHANK3Q9BYB0 1731 aa13.19□□□□□ -0.3
AP003548.1-202ENST00000522767 PXDNLA1KZ92 1463 aa13.19□□□□□ -0.3
AP003548.1-202ENST00000522767 F6X3S4 739 aa13.19□□□□□ -0.3
AP003548.1-202ENST00000522767 PIAS4Q8N2W9 510 aaPredicted RBP13.19□□□□□ -0.3
AP003548.1-202ENST00000522767 ZNF496Q96IT1 587 aaPredicted RBP13.19□□□□□ -0.3
AP003548.1-202ENST00000522767 NGLY1Q96IV0 654 aa13.19□□□□□ -0.3
AP003548.1-202ENST00000522767 DDX21Q9NR30 783 aaKnown RBP eCLIP13.19□□□□□ -0.3
AP003548.1-202ENST00000522767 TMOD3Q9NYL9 352 aa13.19□□□□□ -0.3
AP003548.1-202ENST00000522767 SLIT2O94813 1529 aa13.18□□□□□ -0.3
AP003548.1-202ENST00000522767 SPATA31A5Q5VU36 1347 aa13.18□□□□□ -0.3
AP003548.1-202ENST00000522767 SPATA31A7Q8IWB4 1347 aa13.18□□□□□ -0.3
AP003548.1-202ENST00000522767 DDX58O95786 925 aaKnown RBP13.18□□□□□ -0.3
AP003548.1-202ENST00000522767 GNAI3P08754 354 aa13.18□□□□□ -0.3
AP003548.1-202ENST00000522767 HSPA1LP34931 641 aa13.18□□□□□ -0.3
AP003548.1-202ENST00000522767 UNC5CLQ8IV45 518 aa13.18□□□□□ -0.3
AP003548.1-202ENST00000522767 PHAXQ9H814 394 aaKnown RBP13.18□□□□□ -0.3
AP003548.1-202ENST00000522767 WNK3Q9BYP7 1800 aa13.18□□□□□ -0.3
AP003548.1-202ENST00000522767 TNS2Q63HR2 1409 aa13.17□□□□□ -0.3
AP003548.1-202ENST00000522767 DDB1Q16531 1140 aa13.17□□□□□ -0.3
AP003548.1-202ENST00000522767 BARGINQ6ZT62 677 aa13.17□□□□□ -0.3
AP003548.1-202ENST00000522767 C8orf37Q96NL8 207 aa13.17□□□□□ -0.3
AP003548.1-202ENST00000522767 RPAP2Q8IXW5 612 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms