RNA–Protein interactions for RNA: ENST00000522111.2

TRNP1-201, Transcript of TMF1-regulated nuclear protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRNP1, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1-201ENST00000522111 COG6Q9Y2V7 657 aa34.88■■■■□ 3.17
TRNP1-201ENST00000522111 KCNQ3O43525 872 aa34.87■■■■□ 3.17
TRNP1-201ENST00000522111 CCDC136Q96JN2 1154 aa34.87■■■■□ 3.17
TRNP1-201ENST00000522111 TRIM27P14373 513 aa34.87■■■■□ 3.17
TRNP1-201ENST00000522111 DCAF5Q96JK2 942 aa34.87■■■■□ 3.17
TRNP1-201ENST00000522111 C8orf37Q96NL8 207 aa34.87■■■■□ 3.17
TRNP1-201ENST00000522111 ATF7IPQ6VMQ6 1270 aa34.85■■■■□ 3.17
TRNP1-201ENST00000522111 FTSJ3Q8IY81 847 aaKnown RBP34.85■■■■□ 3.17
TRNP1-201ENST00000522111 NWD2Q9ULI1 1742 aa34.85■■■■□ 3.17
TRNP1-201ENST00000522111 SLC52A2Q9HAB3 445 aa34.84■■■■□ 3.17
TRNP1-201ENST00000522111 SLIT2O94813 1529 aa34.84■■■■□ 3.17
TRNP1-201ENST00000522111 HSP90AB1P08238 724 aaKnown RBP34.83■■■■□ 3.17
TRNP1-201ENST00000522111 NFATC2IPQ8NCF5 419 aa34.83■■■■□ 3.17
TRNP1-201ENST00000522111 BRPF1P55201 1214 aaPredicted RBP34.82■■■■□ 3.16
TRNP1-201ENST00000522111 DZIP1LQ8IYY4 767 aaKnown RBP34.82■■■■□ 3.16
TRNP1-201ENST00000522111 LRP6O75581 1613 aa34.82■■■■□ 3.16
TRNP1-201ENST00000522111 IPO8O15397 1037 aaKnown RBP34.82■■■■□ 3.16
TRNP1-201ENST00000522111 EIF4A1P60842 406 aaKnown RBP34.82■■■■□ 3.16
TRNP1-201ENST00000522111 NECTIN2Q92692 538 aa34.82■■■■□ 3.16
TRNP1-201ENST00000522111 NGLY1Q96IV0 654 aa34.82■■■■□ 3.16
TRNP1-201ENST00000522111 CCDC9Q9Y3X0 531 aaKnown RBP34.82■■■■□ 3.16
TRNP1-201ENST00000522111 DISP2A7MBM2 1401 aa34.81■■■■□ 3.16
TRNP1-201ENST00000522111 SPATA31A6Q5VVP1 1343 aa34.8■■■■□ 3.16
TRNP1-201ENST00000522111 WNK3Q9BYP7 1800 aa34.8■■■■□ 3.16
TRNP1-201ENST00000522111 SPATA31A1Q5TZJ5 1347 aa34.79■■■■□ 3.16
TRNP1-201ENST00000522111 MRC1P22897 1456 aa34.78■■■■□ 3.16
TRNP1-201ENST00000522111 SLC39A6Q13433 755 aa34.77■■■■□ 3.16
TRNP1-201ENST00000522111 CABP4P57796 275 aa34.76■■■■□ 3.16
TRNP1-201ENST00000522111 SLC4A2P04920 1241 aa34.75■■■■□ 3.15
TRNP1-201ENST00000522111 MS4A1P11836 297 aa34.75■■■■□ 3.15
TRNP1-201ENST00000522111 SPATA31A5Q5VU36 1347 aa34.73■■■■□ 3.15
TRNP1-201ENST00000522111 SPATA31A7Q8IWB4 1347 aa34.73■■■■□ 3.15
TRNP1-201ENST00000522111 UNC5CLQ8IV45 518 aa34.73■■■■□ 3.15
TRNP1-201ENST00000522111 MVPQ14764 893 aaKnown RBP34.72■■■■□ 3.15
TRNP1-201ENST00000522111 ZNF790Q6PG37 636 aa34.72■■■■□ 3.15
TRNP1-201ENST00000522111 ITPRIPQ8IWB1 547 aa34.72■■■■□ 3.15
TRNP1-201ENST00000522111 TMEM57Q8N5G2 664 aa34.72■■■■□ 3.15
TRNP1-201ENST00000522111 STK31Q9BXU1 1019 aa34.72■■■■□ 3.15
TRNP1-201ENST00000522111 EIF2S2P20042 333 aaKnown RBP34.71■■■■□ 3.15
TRNP1-201ENST00000522111 NKX1-1Q15270 411 aaPredicted RBP34.71■■■■□ 3.15
TRNP1-201ENST00000522111 HDGFL1Q5TGJ6 251 aa34.71■■■■□ 3.15
TRNP1-201ENST00000522111 CCDC30Q5VVM6 783 aa34.71■■■■□ 3.15
TRNP1-201ENST00000522111 BCL9LQ86UU0 1499 aa34.71■■■■□ 3.15
TRNP1-201ENST00000522111 ARHGAP45Q92619 1136 aa34.71■■■■□ 3.15
TRNP1-201ENST00000522111 SOS1Q07889 1333 aaPredicted RBP34.7■■■■□ 3.15
TRNP1-201ENST00000522111 MEX3CQ5U5Q3 659 aaKnown RBP34.69■■■■□ 3.14
TRNP1-201ENST00000522111 TOGARAM1Q9Y4F4 1720 aa34.69■■■■□ 3.14
TRNP1-201ENST00000522111 EXOC5O00471 708 aa34.69■■■■□ 3.14
TRNP1-201ENST00000522111 THRAP3Q9Y2W1 955 aaKnown RBP34.69■■■■□ 3.14
TRNP1-201ENST00000522111 PRAMEF22A3QJZ6 481 aa34.67■■■■□ 3.14
TRNP1-201ENST00000522111 G2E3Q7L622 706 aa34.67■■■■□ 3.14
TRNP1-201ENST00000522111 TNS2Q63HR2 1409 aa34.66■■■■□ 3.14
TRNP1-201ENST00000522111 ERVV-2B6SEH9 535 aa34.66■■■■□ 3.14
TRNP1-201ENST00000522111 TTC5Q8N0Z6 440 aa34.66■■■■□ 3.14
TRNP1-201ENST00000522111 GIGYF1O75420 1035 aaPredicted RBP34.65■■■■□ 3.14
TRNP1-201ENST00000522111 HOXB7P09629 217 aa34.65■■■■□ 3.14
TRNP1-201ENST00000522111 FNBP4Q8N3X1 1017 aaPredicted RBP34.65■■■■□ 3.14
TRNP1-201ENST00000522111 API5Q9BZZ5 524 aaKnown RBP34.65■■■■□ 3.14
TRNP1-201ENST00000522111 HEG1Q9ULI3 1381 aa34.64■■■■□ 3.14
TRNP1-201ENST00000522111 CDCA7Q9BWT1 371 aaPredicted RBP34.63■■■■□ 3.14
TRNP1-201ENST00000522111 USP21Q9UK80 565 aa34.63■■■■□ 3.14
TRNP1-201ENST00000522111 ABCC4O15439 1325 aa34.63■■■■□ 3.13
TRNP1-201ENST00000522111 DDB1Q16531 1140 aa34.62■■■■□ 3.13
TRNP1-201ENST00000522111 ZNF496Q96IT1 587 aaPredicted RBP34.62■■■■□ 3.13
TRNP1-201ENST00000522111 RGS12O14924 1447 aa34.62■■■■□ 3.13
TRNP1-201ENST00000522111 PTPRCP08575 1304 aa34.61■■■■□ 3.13
TRNP1-201ENST00000522111 C5P01031 1676 aa34.61■■■■□ 3.13
TRNP1-201ENST00000522111 VPS72Q15906 364 aa34.61■■■■□ 3.13
TRNP1-201ENST00000522111 CHPF2Q9P2E5 772 aa34.61■■■■□ 3.13
TRNP1-201ENST00000522111 DDX19BQ9UMR2 479 aa34.61■■■■□ 3.13
TRNP1-201ENST00000522111 FAM98CQ17RN3 349 aaKnown RBP34.6■■■■□ 3.13
TRNP1-201ENST00000522111 CACNA1FO60840 1977 aa34.59■■■■□ 3.13
TRNP1-201ENST00000522111 FLIIQ13045 1269 aa34.58■■■■□ 3.13
TRNP1-201ENST00000522111 BARGINQ6ZT62 677 aa34.58■■■■□ 3.13
TRNP1-201ENST00000522111 KAT6BQ8WYB5 2073 aa34.58■■■■□ 3.13
TRNP1-201ENST00000522111 TMOD3Q9NYL9 352 aa34.58■■■■□ 3.13
TRNP1-201ENST00000522111 ANXA1P04083 346 aa34.56■■■■□ 3.12
TRNP1-201ENST00000522111 FKBP5Q13451 457 aaPredicted RBP34.56■■■■□ 3.12
TRNP1-201ENST00000522111 FMNL2Q96PY5 1086 aa34.56■■■■□ 3.12
TRNP1-201ENST00000522111 PHAXQ9H814 394 aaKnown RBP34.56■■■■□ 3.12
TRNP1-201ENST00000522111 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.55■■■■□ 3.12
TRNP1-201ENST00000522111 F6X3S4 739 aa34.55■■■■□ 3.12
TRNP1-201ENST00000522111 ITGB4P16144 1822 aa34.55■■■■□ 3.12
TRNP1-201ENST00000522111 PAPPAQ13219 1627 aa34.54■■■■□ 3.12
TRNP1-201ENST00000522111 AFF2P51816 1311 aa34.53■■■■□ 3.12
TRNP1-201ENST00000522111 CHMP4AQ9BY43 222 aa34.53■■■■□ 3.12
TRNP1-201ENST00000522111 A0A0G2JS52 829 aa34.52■■■■□ 3.12
TRNP1-201ENST00000522111 MYT1Q01538 1121 aa34.52■■■■□ 3.12
TRNP1-201ENST00000522111 PELP1Q8IZL8 1130 aaKnown RBP34.52■■■■□ 3.12
TRNP1-201ENST00000522111 SYTL4Q96C24 671 aaPredicted RBP34.52■■■■□ 3.12
TRNP1-201ENST00000522111 UBR2Q8IWV8 1755 aa34.51■■■■□ 3.12
TRNP1-201ENST00000522111 SLC4A10Q6U841 1118 aa34.51■■■■□ 3.12
TRNP1-201ENST00000522111 PCDHB15Q9Y5E8 787 aa34.51■■■■□ 3.12
TRNP1-201ENST00000522111 DOT1LQ8TEK3 1739 aa34.51■■■■□ 3.11
TRNP1-201ENST00000522111 GLI3P10071 1580 aa34.51■■■■□ 3.11
TRNP1-201ENST00000522111 SNRPA1P09661 255 aaKnown RBP34.51■■■■□ 3.11
TRNP1-201ENST00000522111 PIGBQ92521 554 aa34.51■■■■□ 3.11
TRNP1-201ENST00000522111 PTCD1O75127 700 aaKnown RBP34.5■■■■□ 3.11
TRNP1-201ENST00000522111 AAMPQ13685 434 aa34.5■■■■□ 3.11
TRNP1-201ENST00000522111 PROSER3Q2NL68 480 aa34.5■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms