RNA–Protein interactions for RNA: ENST00000521902.5

RUNX1T1-238, Transcript of RUNX1 translocation partner 1, human

TSL 4

Gene RUNX1T1, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUNX1T1-238	ENST00000521902	CIC	Q96RK0	1608 aa	Predicted RBP	19.97	■□□□□ 0.79
RUNX1T1-238	ENST00000521902	DPEP1	P16444	411 aa		19.96	■□□□□ 0.79
RUNX1T1-238	ENST00000521902	IFNL2	Q8IZJ0	200 aa		19.96	■□□□□ 0.79
RUNX1T1-238	ENST00000521902	NCAPD2	Q15021	1401 aa		19.95	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	UBR3	Q6ZT12	1888 aa		19.95	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	FCHSD2	O94868	740 aa		19.95	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	PHKG2	P15735	406 aa		19.95	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	EYA1	Q99502	592 aa		19.95	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	PPM1G	O15355	546 aa	Predicted RBP	19.94	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	ARHGEF1	Q92888	912 aa	Known RBP	19.94	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	KLRG1	Q96E93	195 aa		19.94	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	CARD14	Q9BXL6	1004 aa		19.94	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	CCDC87	Q9NVE4	849 aa		19.94	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	WASHC2A	Q641Q2	1341 aa		19.94	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	ADRA2B	P18089	450 aa		19.93	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	KCNA3	P22001	575 aa		19.93	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	RC3H1	Q5TC82	1133 aa	Known RBP	19.93	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	C9orf131	Q5VYM1	1079 aa		19.93	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	JMY	Q8N9B5	988 aa		19.93	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	SLC4A9	Q96Q91	983 aa		19.93	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	GYS1	P13807	737 aa		19.92	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	FSTL1	Q12841	308 aa		19.92	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	COL13A1	Q5TAT6	717 aa	Predicted RBP	19.92	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	MAP2	P11137	1827 aa	Known RBP	19.92	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	C10orf71	Q711Q0	1435 aa		19.92	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	HTRA3	P83110	453 aa		19.91	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	CDCA8	Q53HL2	280 aa		19.91	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	C16orf71	Q8IYS4	520 aa	Predicted RBP	19.91	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	PARP3	Q9Y6F1	533 aa		19.91	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	RFC4	P35249	363 aa		19.9	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	ITGB4	P16144	1822 aa		19.9	■□□□□ 0.78
RUNX1T1-238	ENST00000521902	ERVV-2	B6SEH9	535 aa		19.89	■□□□□ 0.77
RUNX1T1-238	ENST00000521902	RPS6KA4	O75676	772 aa		19.89	■□□□□ 0.77
RUNX1T1-238	ENST00000521902	PIM2	Q9P1W9	311 aa		19.89	■□□□□ 0.77
RUNX1T1-238	ENST00000521902	KDR	P35968	1356 aa		19.88	■□□□□ 0.77
RUNX1T1-238	ENST00000521902	RBM42	Q9BTD8	480 aa	Known RBP	19.88	■□□□□ 0.77
RUNX1T1-238	ENST00000521902	PKD1L3	Q7Z443	1732 aa		19.88	■□□□□ 0.77
RUNX1T1-238	ENST00000521902	CNTNAP4	Q9C0A0	1308 aa		19.87	■□□□□ 0.77
RUNX1T1-238	ENST00000521902	DCAF5	Q96JK2	942 aa		19.87	■□□□□ 0.77
RUNX1T1-238	ENST00000521902	PLEKHG2	Q9H7P9	1386 aa		19.86	■□□□□ 0.77
RUNX1T1-238	ENST00000521902	KDM2B	Q8NHM5	1336 aa		19.86	■□□□□ 0.77
RUNX1T1-238	ENST00000521902	DALRD3	Q5D0E6	543 aa	Known RBP	19.86	■□□□□ 0.77
RUNX1T1-238	ENST00000521902	POLK	Q9UBT6	870 aa		19.86	■□□□□ 0.77
RUNX1T1-238	ENST00000521902	RRAGC	Q9HB90	399 aa		19.85	■□□□□ 0.77
RUNX1T1-238	ENST00000521902	KIF13B	Q9NQT8	1826 aa		19.84	■□□□□ 0.77
RUNX1T1-238	ENST00000521902	HSP90AB1	P08238	724 aa	Known RBP	19.84	■□□□□ 0.77
RUNX1T1-238	ENST00000521902	KIAA1551	Q9HCM1	1747 aa		19.83	■□□□□ 0.77
RUNX1T1-238	ENST00000521902	RNF181	Q9P0P0	153 aa		19.83	■□□□□ 0.77
RUNX1T1-238	ENST00000521902	EIF4A2	Q14240	407 aa	Known RBP	19.82	■□□□□ 0.76
RUNX1T1-238	ENST00000521902	FKBP8	Q14318	412 aa		19.81	■□□□□ 0.76
RUNX1T1-238	ENST00000521902	N4BP2	Q86UW6	1770 aa	Predicted RBP	19.8	■□□□□ 0.76
RUNX1T1-238	ENST00000521902	CABP4	P57796	275 aa		19.8	■□□□□ 0.76
RUNX1T1-238	ENST00000521902	DDR1	Q08345	913 aa		19.8	■□□□□ 0.76
RUNX1T1-238	ENST00000521902	TNS4	Q8IZW8	715 aa		19.8	■□□□□ 0.76
RUNX1T1-238	ENST00000521902	SMC1B	Q8NDV3	1235 aa		19.8	■□□□□ 0.76
RUNX1T1-238	ENST00000521902	KCP	Q6ZWJ8	1503 aa		19.8	■□□□□ 0.76
RUNX1T1-238	ENST00000521902	PCNT	O95613	3336 aa		19.79	■□□□□ 0.76
RUNX1T1-238	ENST00000521902	CAPN15	O75808	1086 aa		19.79	■□□□□ 0.76
RUNX1T1-238	ENST00000521902	CHRNA5	P30532	468 aa		19.79	■□□□□ 0.76
RUNX1T1-238	ENST00000521902	PRELP	P51888	382 aa		19.79	■□□□□ 0.76
RUNX1T1-238	ENST00000521902	PLEKHO1	Q53GL0	409 aa	Predicted RBP	19.79	■□□□□ 0.76
RUNX1T1-238	ENST00000521902	SRP68	Q9UHB9	627 aa	Known RBP	19.79	■□□□□ 0.76
RUNX1T1-238	ENST00000521902	C4A	P0C0L4	1744 aa		19.78	■□□□□ 0.76
RUNX1T1-238	ENST00000521902	USP42	Q9H9J4	1324 aa	Known RBP	19.77	■□□□□ 0.76
RUNX1T1-238	ENST00000521902	PTCD1	O75127	700 aa	Known RBP	19.77	■□□□□ 0.76
RUNX1T1-238	ENST00000521902	TM4SF1	P30408	202 aa		19.77	■□□□□ 0.76
RUNX1T1-238	ENST00000521902	CRKL	P46109	303 aa	Known RBP	19.77	■□□□□ 0.76
RUNX1T1-238	ENST00000521902	WDR90	Q96KV7	1748 aa		19.76	■□□□□ 0.75
RUNX1T1-238	ENST00000521902	AMOT	Q4VCS5	1084 aa		19.76	■□□□□ 0.75
RUNX1T1-238	ENST00000521902	POLRMT	O00411	1230 aa	Known RBP	19.75	■□□□□ 0.75
RUNX1T1-238	ENST00000521902	MTHFS	P49914	203 aa		19.75	■□□□□ 0.75
RUNX1T1-238	ENST00000521902	ZC3H4	Q9UPT8	1303 aa	Known RBP	19.75	■□□□□ 0.75
RUNX1T1-238	ENST00000521902	KIF20B	Q96Q89	1820 aa		19.74	■□□□□ 0.75
RUNX1T1-238	ENST00000521902	ZNF530	Q6P9A1	599 aa	Predicted RBP	19.74	■□□□□ 0.75
RUNX1T1-238	ENST00000521902	INTS5	Q6P9B9	1019 aa	Known RBP	19.74	■□□□□ 0.75
RUNX1T1-238	ENST00000521902	NFATC2IP	Q8NCF5	419 aa		19.74	■□□□□ 0.75
RUNX1T1-238	ENST00000521902	KDM6A	O15550	1401 aa	Predicted RBP	19.74	■□□□□ 0.75
RUNX1T1-238	ENST00000521902	ZNF831	Q5JPB2	1677 aa		19.73	■□□□□ 0.75
RUNX1T1-238	ENST00000521902	VEGFA	P15692	232 aa	Predicted RBP	19.73	■□□□□ 0.75
RUNX1T1-238	ENST00000521902	TNNT2	P45379	298 aa	Predicted RBP	19.73	■□□□□ 0.75
RUNX1T1-238	ENST00000521902	GLTPD2	A6NH11	291 aa		19.72	■□□□□ 0.75
RUNX1T1-238	ENST00000521902	LMNB1	P20700	586 aa		19.71	■□□□□ 0.75
RUNX1T1-238	ENST00000521902	BRCA1	P38398	1863 aa	Known RBP	19.71	■□□□□ 0.75
RUNX1T1-238	ENST00000521902	ZPR1	O75312	459 aa		19.7	■□□□□ 0.74
RUNX1T1-238	ENST00000521902	HSPA1A	P0DMV8	641 aa	Known RBP	19.7	■□□□□ 0.74
RUNX1T1-238	ENST00000521902	HSPA1B	P0DMV9	641 aa	Known RBP	19.7	■□□□□ 0.74
RUNX1T1-238	ENST00000521902	RASSF7	Q02833	373 aa		19.7	■□□□□ 0.74
RUNX1T1-238	ENST00000521902	ANKRD26	Q9UPS8	1709 aa		19.7	■□□□□ 0.74
RUNX1T1-238	ENST00000521902	C1orf141	Q5JVX7	400 aa		19.69	■□□□□ 0.74
RUNX1T1-238	ENST00000521902	USPL1	Q5W0Q7	1092 aa		19.69	■□□□□ 0.74
RUNX1T1-238	ENST00000521902	ARFGEF1	Q9Y6D6	1849 aa		19.68	■□□□□ 0.74
RUNX1T1-238	ENST00000521902	MYH14	Q7Z406	1995 aa	Known RBP	19.67	■□□□□ 0.74
RUNX1T1-238	ENST00000521902	NFIX	Q14938	502 aa		19.67	■□□□□ 0.74
RUNX1T1-238	ENST00000521902	AEBP1	Q8IUX7	1158 aa		19.67	■□□□□ 0.74
RUNX1T1-238	ENST00000521902	COL5A3	P25940	1745 aa	Predicted RBP	19.67	■□□□□ 0.74
RUNX1T1-238	ENST00000521902	DNAJC10	Q8IXB1	793 aa		19.66	■□□□□ 0.74
RUNX1T1-238	ENST00000521902	TTLL6	Q8N841	843 aa		19.66	■□□□□ 0.74
RUNX1T1-238	ENST00000521902	SOS1	Q07889	1333 aa	Predicted RBP	19.66	■□□□□ 0.74
RUNX1T1-238	ENST00000521902	POTEC	B2RU33	542 aa		19.65	■□□□□ 0.74
RUNX1T1-238	ENST00000521902	NARF	Q9UHQ1	456 aa		19.65	■□□□□ 0.74

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms