RNA–Protein interactions for RNA: ENST00000521343.1

TPM3P3-201, Transcript of tropomyosin 3 pseudogene 3, humanhuman

BASIC

Gene TPM3P3, Length 354 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P3-201ENST00000521343 IL27Q8NEV9 243 aa8.12□□□□□ -1.11
TPM3P3-201ENST00000521343 TATDN2Q93075 761 aa8.12□□□□□ -1.11
TPM3P3-201ENST00000521343 GGNBP2Q9H3C7 697 aa8.12□□□□□ -1.11
TPM3P3-201ENST00000521343 WBP1LQ9NX94 342 aa8.12□□□□□ -1.11
TPM3P3-201ENST00000521343 SEPT9Q9UHD8 586 aaPredicted RBP8.12□□□□□ -1.11
TPM3P3-201ENST00000521343 ADAMTS8Q9UP79 889 aa8.12□□□□□ -1.11
TPM3P3-201ENST00000521343 C3P01024 1663 aa8.11□□□□□ -1.11
TPM3P3-201ENST00000521343 NSD2O96028 1365 aa8.11□□□□□ -1.11
TPM3P3-201ENST00000521343 MYO3AQ8NEV4 1616 aa8.11□□□□□ -1.11
TPM3P3-201ENST00000521343 ZBED9Q6R2W3 1325 aa8.11□□□□□ -1.11
TPM3P3-201ENST00000521343 PLEKHG3A1L390 1219 aa8.11□□□□□ -1.11
TPM3P3-201ENST00000521343 MTHFSP49914 203 aa8.11□□□□□ -1.11
TPM3P3-201ENST00000521343 FAM98CQ17RN3 349 aaKnown RBP8.11□□□□□ -1.11
TPM3P3-201ENST00000521343 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.11□□□□□ -1.11
TPM3P3-201ENST00000521343 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.11□□□□□ -1.11
TPM3P3-201ENST00000521343 TULP4Q9NRJ4 1543 aa8.11□□□□□ -1.11
TPM3P3-201ENST00000521343 POLR1AO95602 1720 aaPredicted RBP8.11□□□□□ -1.11
TPM3P3-201ENST00000521343 KDM5AP29375 1690 aaKnown RBP8.11□□□□□ -1.11
TPM3P3-201ENST00000521343 PTPRUQ92729 1446 aa8.11□□□□□ -1.11
TPM3P3-201ENST00000521343 FER1L4A9Z1Z3 1794 aa8.1□□□□□ -1.11
TPM3P3-201ENST00000521343 UBR1Q8IWV7 1749 aa8.1□□□□□ -1.11
TPM3P3-201ENST00000521343 RCCD1A6NED2 376 aa8.1□□□□□ -1.11
TPM3P3-201ENST00000521343 C14orf37Q86TY3 774 aa8.1□□□□□ -1.11
TPM3P3-201ENST00000521343 PROSER2Q86WR7 435 aaPredicted RBP8.1□□□□□ -1.11
TPM3P3-201ENST00000521343 LRCH3Q96II8 777 aa8.1□□□□□ -1.11
TPM3P3-201ENST00000521343 EYA1Q99502 592 aa8.1□□□□□ -1.11
TPM3P3-201ENST00000521343 TSR3Q9UJK0 312 aaKnown RBP8.1□□□□□ -1.11
TPM3P3-201ENST00000521343 ADAMTSL3P82987 1691 aa8.1□□□□□ -1.11
TPM3P3-201ENST00000521343 A0A1W2PP64 1363 aa8.1□□□□□ -1.11
TPM3P3-201ENST00000521343 NEFLP07196 543 aa8.09□□□□□ -1.11
TPM3P3-201ENST00000521343 MS4A1P11836 297 aa8.09□□□□□ -1.11
TPM3P3-201ENST00000521343 CLCN1P35523 988 aa8.09□□□□□ -1.11
TPM3P3-201ENST00000521343 NGDNQ8NEJ9 315 aaKnown RBP8.09□□□□□ -1.11
TPM3P3-201ENST00000521343 FAM117AQ9C073 453 aa8.09□□□□□ -1.11
TPM3P3-201ENST00000521343 GPCPD1Q9NPB8 672 aa8.09□□□□□ -1.11
TPM3P3-201ENST00000521343 HPS5Q9UPZ3 1129 aa8.09□□□□□ -1.11
TPM3P3-201ENST00000521343 NUDCQ9Y266 331 aa8.09□□□□□ -1.11
TPM3P3-201ENST00000521343 SALL2Q9Y467 1007 aaPredicted RBP8.09□□□□□ -1.11
TPM3P3-201ENST00000521343 NPHP4O75161 1426 aaPredicted RBP8.09□□□□□ -1.11
TPM3P3-201ENST00000521343 CEP170BQ9Y4F5 1589 aaPredicted RBP8.09□□□□□ -1.11
TPM3P3-201ENST00000521343 RIMS1Q86UR5 1692 aaKnown RBP8.08□□□□□ -1.12
TPM3P3-201ENST00000521343 MYO5BQ9ULV0 1848 aa8.08□□□□□ -1.12
TPM3P3-201ENST00000521343 ACEP12821 1306 aa8.08□□□□□ -1.12
TPM3P3-201ENST00000521343 PRR36Q9H6K5 1346 aa8.08□□□□□ -1.12
TPM3P3-201ENST00000521343 SENP3-EIF4A1A0A087X0R7 540 aa8.08□□□□□ -1.12
TPM3P3-201ENST00000521343 LAPTM4AQ15012 233 aa8.08□□□□□ -1.12
TPM3P3-201ENST00000521343 COG3Q96JB2 828 aa8.08□□□□□ -1.12
TPM3P3-201ENST00000521343 PPIP5K1Q6PFW1 1433 aa8.08□□□□□ -1.12
TPM3P3-201ENST00000521343 INSRP06213 1382 aa8.08□□□□□ -1.12
TPM3P3-201ENST00000521343 QRICH2Q9H0J4 1663 aa8.08□□□□□ -1.12
TPM3P3-201ENST00000521343 HSPA2P54652 639 aa8.07□□□□□ -1.12
TPM3P3-201ENST00000521343 PDE3BQ13370 1112 aa8.07□□□□□ -1.12
TPM3P3-201ENST00000521343 TMEM132AQ24JP5 1023 aa8.07□□□□□ -1.12
TPM3P3-201ENST00000521343 NME9Q86XW9 330 aa8.07□□□□□ -1.12
TPM3P3-201ENST00000521343 PMFBP1Q8TBY8 1022 aa8.07□□□□□ -1.12
TPM3P3-201ENST00000521343 POLR3AO14802 1390 aaPredicted RBP8.07□□□□□ -1.12
TPM3P3-201ENST00000521343 NRXN3Q9Y4C0 1643 aa8.07□□□□□ -1.12
TPM3P3-201ENST00000521343 PTCH1Q13635 1447 aa8.06□□□□□ -1.12
TPM3P3-201ENST00000521343 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.06□□□□□ -1.12
TPM3P3-201ENST00000521343 PPM1GO15355 546 aaPredicted RBP8.06□□□□□ -1.12
TPM3P3-201ENST00000521343 DNAJB2P25686 324 aa8.06□□□□□ -1.12
TPM3P3-201ENST00000521343 NGEFQ8N5V2 710 aa8.06□□□□□ -1.12
TPM3P3-201ENST00000521343 TMUB1Q9BVT8 246 aa8.06□□□□□ -1.12
TPM3P3-201ENST00000521343 ARHGEF28Q8N1W1 1705 aaKnown RBP8.06□□□□□ -1.12
TPM3P3-201ENST00000521343 TTC21BQ7Z4L5 1316 aa8.05□□□□□ -1.12
TPM3P3-201ENST00000521343 CPSF1Q10570 1443 aaKnown RBP8.05□□□□□ -1.12
TPM3P3-201ENST00000521343 U2AF1L5P0DN76 240 aaPredicted RBP8.05□□□□□ -1.12
TPM3P3-201ENST00000521343 SSTR3P32745 418 aaPredicted RBP8.05□□□□□ -1.12
TPM3P3-201ENST00000521343 PPP4CP60510 307 aa8.05□□□□□ -1.12
TPM3P3-201ENST00000521343 U2AF1Q01081 240 aaKnown RBP eCLIP8.05□□□□□ -1.12
TPM3P3-201ENST00000521343 CCDC146Q8IYE0 955 aa8.05□□□□□ -1.12
TPM3P3-201ENST00000521343 SUPT16HQ9Y5B9 1047 aaKnown RBP8.05□□□□□ -1.12
TPM3P3-201ENST00000521343 ATP7BP35670 1465 aa8.05□□□□□ -1.12
TPM3P3-201ENST00000521343 CD163L1Q9NR16 1453 aa8.05□□□□□ -1.12
TPM3P3-201ENST00000521343 DIP2AQ14689 1571 aa8.05□□□□□ -1.12
TPM3P3-201ENST00000521343 EDC4Q6P2E9 1401 aaKnown RBP8.04□□□□□ -1.12
TPM3P3-201ENST00000521343 CPS1P31327 1500 aa8.04□□□□□ -1.12
TPM3P3-201ENST00000521343 APAF1O14727 1248 aa8.04□□□□□ -1.12
TPM3P3-201ENST00000521343 U2SURPO15042 1029 aaKnown RBP8.04□□□□□ -1.12
TPM3P3-201ENST00000521343 DIAPH1O60610 1272 aaKnown RBP8.04□□□□□ -1.12
TPM3P3-201ENST00000521343 ESCO1Q5FWF5 840 aa8.04□□□□□ -1.12
TPM3P3-201ENST00000521343 RUNDC1Q96C34 613 aa8.04□□□□□ -1.12
TPM3P3-201ENST00000521343 PNNQ9H307 717 aaKnown RBP8.04□□□□□ -1.12
TPM3P3-201ENST00000521343 FAM217BQ9NTX9 383 aaPredicted RBP8.04□□□□□ -1.12
TPM3P3-201ENST00000521343 POLKQ9UBT6 870 aa8.04□□□□□ -1.12
TPM3P3-201ENST00000521343 DDX11L8A8MPP1 907 aa8.03□□□□□ -1.12
TPM3P3-201ENST00000521343 RNF40O75150 1001 aa8.03□□□□□ -1.12
TPM3P3-201ENST00000521343 PSME1Q06323 249 aa8.03□□□□□ -1.12
TPM3P3-201ENST00000521343 TMEM134Q9H6X4 195 aa8.03□□□□□ -1.12
TPM3P3-201ENST00000521343 C19orf44Q9H6X5 657 aa8.03□□□□□ -1.12
TPM3P3-201ENST00000521343 TTC21AQ8NDW8 1320 aa8.03□□□□□ -1.12
TPM3P3-201ENST00000521343 ATF3P18847 181 aa8.02□□□□□ -1.13
TPM3P3-201ENST00000521343 FBLN1P23142 703 aa8.02□□□□□ -1.13
TPM3P3-201ENST00000521343 SWT1Q5T5J6 900 aaKnown RBP8.02□□□□□ -1.13
TPM3P3-201ENST00000521343 DAXXQ9UER7 740 aaPredicted RBP8.02□□□□□ -1.13
TPM3P3-201ENST00000521343 SETD1BQ9UPS6 1966 aaKnown RBP8.02□□□□□ -1.13
TPM3P3-201ENST00000521343 ANKARQ7Z5J8 1434 aa8.02□□□□□ -1.13
TPM3P3-201ENST00000521343 SMG6Q86US8 1419 aaKnown RBP8.02□□□□□ -1.13
TPM3P3-201ENST00000521343 GFRA3O60609 400 aa8.01□□□□□ -1.13
TPM3P3-201ENST00000521343 NEFMP07197 916 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms