RNA–Protein interactions for RNA: ENST00000521327.1

SPARC-203, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 864 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-203ENST00000521327 NLGN1Q8N2Q7 840 aa18.72■□□□□ 0.59
SPARC-203ENST00000521327 SLC4A9Q96Q91 983 aa18.72■□□□□ 0.59
SPARC-203ENST00000521327 RBM42Q9BTD8 480 aaKnown RBP18.72■□□□□ 0.59
SPARC-203ENST00000521327 A0A0G2JLW4 131 aa18.71■□□□□ 0.59
SPARC-203ENST00000521327 KIF3CO14782 793 aa18.71■□□□□ 0.59
SPARC-203ENST00000521327 BCS1LQ9Y276 419 aa18.71■□□□□ 0.59
SPARC-203ENST00000521327 PKD1L3Q7Z443 1732 aa18.71■□□□□ 0.59
SPARC-203ENST00000521327 KIF20BQ96Q89 1820 aa18.7■□□□□ 0.58
SPARC-203ENST00000521327 ERVV-2B6SEH9 535 aa18.7■□□□□ 0.58
SPARC-203ENST00000521327 TGFB2P61812 414 aa18.7■□□□□ 0.58
SPARC-203ENST00000521327 ARHGEF1Q92888 912 aaKnown RBP18.7■□□□□ 0.58
SPARC-203ENST00000521327 ITGB4P16144 1822 aa18.69■□□□□ 0.58
SPARC-203ENST00000521327 RC3H1Q5TC82 1133 aaKnown RBP18.68■□□□□ 0.58
SPARC-203ENST00000521327 ARHGAP27Q6ZUM4 889 aa18.68■□□□□ 0.58
SPARC-203ENST00000521327 DCAF5Q96JK2 942 aa18.68■□□□□ 0.58
SPARC-203ENST00000521327 UBR3Q6ZT12 1888 aa18.68■□□□□ 0.58
SPARC-203ENST00000521327 PXDNLA1KZ92 1463 aa18.67■□□□□ 0.58
SPARC-203ENST00000521327 HSP90AB1P08238 724 aaKnown RBP18.67■□□□□ 0.58
SPARC-203ENST00000521327 DPEP1P16444 411 aa18.67■□□□□ 0.58
SPARC-203ENST00000521327 ADRA2BP18089 450 aa18.67■□□□□ 0.58
SPARC-203ENST00000521327 RFC4P35249 363 aa18.67■□□□□ 0.58
SPARC-203ENST00000521327 PLEKHO1Q53GL0 409 aaPredicted RBP18.67■□□□□ 0.58
SPARC-203ENST00000521327 MAP2P11137 1827 aaKnown RBP18.67■□□□□ 0.58
SPARC-203ENST00000521327 KDRP35968 1356 aa18.67■□□□□ 0.58
SPARC-203ENST00000521327 RPS6KA4O75676 772 aa18.66■□□□□ 0.58
SPARC-203ENST00000521327 GYS1P13807 737 aa18.66■□□□□ 0.58
SPARC-203ENST00000521327 CABP4P57796 275 aa18.66■□□□□ 0.58
SPARC-203ENST00000521327 CCDC87Q9NVE4 849 aa18.66■□□□□ 0.58
SPARC-203ENST00000521327 FCHSD2O94868 740 aa18.65■□□□□ 0.58
SPARC-203ENST00000521327 ZNF530Q6P9A1 599 aaPredicted RBP18.65■□□□□ 0.58
SPARC-203ENST00000521327 PARP3Q9Y6F1 533 aa18.65■□□□□ 0.58
SPARC-203ENST00000521327 TRIM26Q12899 539 aaPredicted RBP18.64■□□□□ 0.57
SPARC-203ENST00000521327 CNTNAP4Q9C0A0 1308 aa18.64■□□□□ 0.57
SPARC-203ENST00000521327 PTCD1O75127 700 aaKnown RBP18.63■□□□□ 0.57
SPARC-203ENST00000521327 TOMM70O94826 608 aa18.63■□□□□ 0.57
SPARC-203ENST00000521327 MTHFSP49914 203 aa18.63■□□□□ 0.57
SPARC-203ENST00000521327 AMOTQ4VCS5 1084 aa18.63■□□□□ 0.57
SPARC-203ENST00000521327 TIMELESSQ9UNS1 1208 aa18.63■□□□□ 0.57
SPARC-203ENST00000521327 PANK3Q9H999 370 aa18.62■□□□□ 0.57
SPARC-203ENST00000521327 PLEKHG2Q9H7P9 1386 aa18.62■□□□□ 0.57
SPARC-203ENST00000521327 C10orf71Q711Q0 1435 aa18.62■□□□□ 0.57
SPARC-203ENST00000521327 CICQ96RK0 1608 aaPredicted RBP18.61■□□□□ 0.57
SPARC-203ENST00000521327 KCNA3P22001 575 aa18.61■□□□□ 0.57
SPARC-203ENST00000521327 APLP1P51693 650 aa18.61■□□□□ 0.57
SPARC-203ENST00000521327 AEBP1Q8IUX7 1158 aa18.61■□□□□ 0.57
SPARC-203ENST00000521327 NFATC2IPQ8NCF5 419 aa18.61■□□□□ 0.57
SPARC-203ENST00000521327 NMRK2Q9NPI5 230 aa18.61■□□□□ 0.57
SPARC-203ENST00000521327 C1orf141Q5JVX7 400 aa18.6■□□□□ 0.57
SPARC-203ENST00000521327 SRP68Q9UHB9 627 aaKnown RBP18.6■□□□□ 0.57
SPARC-203ENST00000521327 ANKRD26Q9UPS8 1709 aa18.6■□□□□ 0.57
SPARC-203ENST00000521327 KDM6AO15550 1401 aaPredicted RBP18.59■□□□□ 0.57
SPARC-203ENST00000521327 CRKLP46109 303 aaKnown RBP18.59■□□□□ 0.57
SPARC-203ENST00000521327 C9orf131Q5VYM1 1079 aa18.59■□□□□ 0.57
SPARC-203ENST00000521327 PIM2Q9P1W9 311 aa18.59■□□□□ 0.57
SPARC-203ENST00000521327 FKBP8Q14318 412 aa18.58■□□□□ 0.56
SPARC-203ENST00000521327 DALRD3Q5D0E6 543 aaKnown RBP18.57■□□□□ 0.56
SPARC-203ENST00000521327 MORC1Q86VD1 984 aa18.57■□□□□ 0.56
SPARC-203ENST00000521327 DNAJC5GQ8N7S2 189 aa18.57■□□□□ 0.56
SPARC-203ENST00000521327 DDR1Q08345 913 aa18.56■□□□□ 0.56
SPARC-203ENST00000521327 SULT6B1Q6IMI4 303 aa18.56■□□□□ 0.56
SPARC-203ENST00000521327 USP42Q9H9J4 1324 aaKnown RBP18.55■□□□□ 0.56
SPARC-203ENST00000521327 HSPA5P11021 654 aaKnown RBP18.54■□□□□ 0.56
SPARC-203ENST00000521327 CHRNA5P30532 468 aa18.54■□□□□ 0.56
SPARC-203ENST00000521327 EIF4G2P78344 907 aaKnown RBP eCLIP18.54■□□□□ 0.56
SPARC-203ENST00000521327 INTS5Q6P9B9 1019 aaKnown RBP18.54■□□□□ 0.56
SPARC-203ENST00000521327 C16orf71Q8IYS4 520 aaPredicted RBP18.54■□□□□ 0.56
SPARC-203ENST00000521327 RBM46Q8TBY0 533 aaKnown RBP18.53■□□□□ 0.56
SPARC-203ENST00000521327 PCGF6Q9BYE7 350 aa18.53■□□□□ 0.56
SPARC-203ENST00000521327 C4AP0C0L4 1744 aa18.52■□□□□ 0.56
SPARC-203ENST00000521327 RNF181Q9P0P0 153 aa18.52■□□□□ 0.56
SPARC-203ENST00000521327 N4BP2Q86UW6 1770 aaPredicted RBP18.52■□□□□ 0.55
SPARC-203ENST00000521327 KIAA1551Q9HCM1 1747 aa18.52■□□□□ 0.55
SPARC-203ENST00000521327 POLRMTO00411 1230 aaKnown RBP18.51■□□□□ 0.55
SPARC-203ENST00000521327 ZPR1O75312 459 aa18.51■□□□□ 0.55
SPARC-203ENST00000521327 TM4SF1P30408 202 aa18.51■□□□□ 0.55
SPARC-203ENST00000521327 IL13P35225 146 aa18.51■□□□□ 0.55
SPARC-203ENST00000521327 DNAJC10Q8IXB1 793 aa18.51■□□□□ 0.55
SPARC-203ENST00000521327 KIF13BQ9NQT8 1826 aa18.51■□□□□ 0.55
SPARC-203ENST00000521327 HTRA3P83110 453 aa18.5■□□□□ 0.55
SPARC-203ENST00000521327 USPL1Q5W0Q7 1092 aa18.5■□□□□ 0.55
SPARC-203ENST00000521327 RRAGCQ9HB90 399 aa18.5■□□□□ 0.55
SPARC-203ENST00000521327 LGR6Q9HBX8 967 aa18.5■□□□□ 0.55
SPARC-203ENST00000521327 KDM2BQ8NHM5 1336 aa18.49■□□□□ 0.55
SPARC-203ENST00000521327 AKAP4Q5JQC9 854 aa18.49■□□□□ 0.55
SPARC-203ENST00000521327 SLC52A2Q9HAB3 445 aa18.49■□□□□ 0.55
SPARC-203ENST00000521327 KNSTRNQ9Y448 316 aa18.49■□□□□ 0.55
SPARC-203ENST00000521327 ZNF831Q5JPB2 1677 aa18.49■□□□□ 0.55
SPARC-203ENST00000521327 FSTL1Q12841 308 aa18.48■□□□□ 0.55
SPARC-203ENST00000521327 CLSPNQ9HAW4 1339 aa18.48■□□□□ 0.55
SPARC-203ENST00000521327 SLC39A6Q13433 755 aa18.47■□□□□ 0.55
SPARC-203ENST00000521327 SOS1Q07889 1333 aaPredicted RBP18.47■□□□□ 0.55
SPARC-203ENST00000521327 COL5A3P25940 1745 aaPredicted RBP18.46■□□□□ 0.55
SPARC-203ENST00000521327 MYH14Q7Z406 1995 aaKnown RBP18.46■□□□□ 0.55
SPARC-203ENST00000521327 KCPQ6ZWJ8 1503 aa18.46■□□□□ 0.55
SPARC-203ENST00000521327 CYP19A1P11511 503 aaPredicted RBP18.46■□□□□ 0.55
SPARC-203ENST00000521327 RNMTO43148 476 aaKnown RBP18.45■□□□□ 0.54
SPARC-203ENST00000521327 NFIXQ14938 502 aa18.45■□□□□ 0.54
SPARC-203ENST00000521327 KLRG1Q96E93 195 aa18.45■□□□□ 0.54
SPARC-203ENST00000521327 NARFQ9UHQ1 456 aa18.45■□□□□ 0.54
SPARC-203ENST00000521327 HMOX1P09601 288 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms