RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 INSRP06213 1382 aa18.51■□□□□ 0.55
SRGAP3-212ENST00000520860 KIAA1551Q9HCM1 1747 aa18.51■□□□□ 0.55
SRGAP3-212ENST00000520860 ATP6V1AP38606 617 aa18.5■□□□□ 0.55
SRGAP3-212ENST00000520860 TMF1P82094 1093 aa18.5■□□□□ 0.55
SRGAP3-212ENST00000520860 TMOD3Q9NYL9 352 aa18.5■□□□□ 0.55
SRGAP3-212ENST00000520860 MAP2P11137 1827 aaKnown RBP18.5■□□□□ 0.55
SRGAP3-212ENST00000520860 ITPK1Q13572 414 aa18.49■□□□□ 0.55
SRGAP3-212ENST00000520860 HSP90AB2PQ58FF8 381 aa18.49■□□□□ 0.55
SRGAP3-212ENST00000520860 KCPQ6ZWJ8 1503 aa18.49■□□□□ 0.55
SRGAP3-212ENST00000520860 FLT4P35916 1363 aa18.48■□□□□ 0.55
SRGAP3-212ENST00000520860 NKX1-1Q15270 411 aaPredicted RBP18.48■□□□□ 0.55
SRGAP3-212ENST00000520860 TRAPPC3LQ5T215 181 aa18.48■□□□□ 0.55
SRGAP3-212ENST00000520860 SMC1BQ8NDV3 1235 aa18.48■□□□□ 0.55
SRGAP3-212ENST00000520860 GGNBP2Q9H3C7 697 aa18.48■□□□□ 0.55
SRGAP3-212ENST00000520860 RTCBQ9Y3I0 505 aaKnown RBP18.48■□□□□ 0.55
SRGAP3-212ENST00000520860 RRAGCQ9HB90 399 aa18.47■□□□□ 0.55
SRGAP3-212ENST00000520860 RNF181Q9P0P0 153 aa18.47■□□□□ 0.55
SRGAP3-212ENST00000520860 ASAP1Q9ULH1 1129 aa18.47■□□□□ 0.55
SRGAP3-212ENST00000520860 SPG7Q9UQ90 795 aa18.47■□□□□ 0.55
SRGAP3-212ENST00000520860 PARP3Q9Y6F1 533 aa18.47■□□□□ 0.55
SRGAP3-212ENST00000520860 PKD1L3Q7Z443 1732 aa18.46■□□□□ 0.55
SRGAP3-212ENST00000520860 FYB1O15117 783 aa18.45■□□□□ 0.54
SRGAP3-212ENST00000520860 HSPA1AP0DMV8 641 aaKnown RBP18.45■□□□□ 0.54
SRGAP3-212ENST00000520860 HSPA1BP0DMV9 641 aaKnown RBP18.45■□□□□ 0.54
SRGAP3-212ENST00000520860 PIM2Q9P1W9 311 aa18.45■□□□□ 0.54
SRGAP3-212ENST00000520860 KIF24Q5T7B8 1368 aa18.44■□□□□ 0.54
SRGAP3-212ENST00000520860 C4AP0C0L4 1744 aa18.44■□□□□ 0.54
SRGAP3-212ENST00000520860 ADRA2BP18089 450 aa18.44■□□□□ 0.54
SRGAP3-212ENST00000520860 ARFGEF1Q9Y6D6 1849 aa18.44■□□□□ 0.54
SRGAP3-212ENST00000520860 BRCA1P38398 1863 aaKnown RBP18.43■□□□□ 0.54
SRGAP3-212ENST00000520860 DALRD3Q5D0E6 543 aaKnown RBP18.43■□□□□ 0.54
SRGAP3-212ENST00000520860 TNRC6CQ9HCJ0 1690 aaKnown RBP18.43■□□□□ 0.54
SRGAP3-212ENST00000520860 GYS1P13807 737 aa18.42■□□□□ 0.54
SRGAP3-212ENST00000520860 RFC4P35249 363 aa18.42■□□□□ 0.54
SRGAP3-212ENST00000520860 ARHGEF1Q92888 912 aaKnown RBP18.42■□□□□ 0.54
SRGAP3-212ENST00000520860 DCAF5Q96JK2 942 aa18.42■□□□□ 0.54
SRGAP3-212ENST00000520860 SLC24A1O60721 1099 aa18.41■□□□□ 0.54
SRGAP3-212ENST00000520860 KCNA3P22001 575 aa18.41■□□□□ 0.54
SRGAP3-212ENST00000520860 ATG3Q9NT62 314 aa18.41■□□□□ 0.54
SRGAP3-212ENST00000520860 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.4■□□□□ 0.54
SRGAP3-212ENST00000520860 RC3H1Q5TC82 1133 aaKnown RBP18.39■□□□□ 0.53
SRGAP3-212ENST00000520860 IFNL2Q8IZJ0 200 aa18.39■□□□□ 0.53
SRGAP3-212ENST00000520860 TESK2Q96S53 571 aa18.39■□□□□ 0.53
SRGAP3-212ENST00000520860 RBM42Q9BTD8 480 aaKnown RBP18.39■□□□□ 0.53
SRGAP3-212ENST00000520860 KDRP35968 1356 aa18.38■□□□□ 0.53
SRGAP3-212ENST00000520860 NCAPD2Q15021 1401 aa18.38■□□□□ 0.53
SRGAP3-212ENST00000520860 ST20-MTHFSA0A0A6YYL1 179 aa18.37■□□□□ 0.53
SRGAP3-212ENST00000520860 RPS6KA4O75676 772 aa18.37■□□□□ 0.53
SRGAP3-212ENST00000520860 PHKG2P15735 406 aa18.37■□□□□ 0.53
SRGAP3-212ENST00000520860 CNTNAP4Q9C0A0 1308 aa18.37■□□□□ 0.53
SRGAP3-212ENST00000520860 ZC3H4Q9UPT8 1303 aaKnown RBP18.37■□□□□ 0.53
SRGAP3-212ENST00000520860 VEGFAP15692 232 aaPredicted RBP18.36■□□□□ 0.53
SRGAP3-212ENST00000520860 EMILIN1Q9Y6C2 1016 aa18.36■□□□□ 0.53
SRGAP3-212ENST00000520860 PPM1GO15355 546 aaPredicted RBP18.35■□□□□ 0.53
SRGAP3-212ENST00000520860 SBF1O95248 1867 aa18.35■□□□□ 0.53
SRGAP3-212ENST00000520860 TONSLQ96HA7 1378 aa18.34■□□□□ 0.53
SRGAP3-212ENST00000520860 SLC4A9Q96Q91 983 aa18.34■□□□□ 0.53
SRGAP3-212ENST00000520860 KIF20BQ96Q89 1820 aa18.33■□□□□ 0.53
SRGAP3-212ENST00000520860 CHRNA5P30532 468 aa18.33■□□□□ 0.52
SRGAP3-212ENST00000520860 ZNF831Q5JPB2 1677 aa18.32■□□□□ 0.52
SRGAP3-212ENST00000520860 GLTPD2A6NH11 291 aa18.32■□□□□ 0.52
SRGAP3-212ENST00000520860 EYA1Q99502 592 aa18.32■□□□□ 0.52
SRGAP3-212ENST00000520860 ERVV-2B6SEH9 535 aa18.31■□□□□ 0.52
SRGAP3-212ENST00000520860 RASSF7Q02833 373 aa18.31■□□□□ 0.52
SRGAP3-212ENST00000520860 SRP68Q9UHB9 627 aaKnown RBP18.31■□□□□ 0.52
SRGAP3-212ENST00000520860 COL5A3P25940 1745 aaPredicted RBP18.31■□□□□ 0.52
SRGAP3-212ENST00000520860 SLC34A2O95436 690 aa18.3■□□□□ 0.52
SRGAP3-212ENST00000520860 LMNB1P20700 586 aa18.3■□□□□ 0.52
SRGAP3-212ENST00000520860 DDR1Q08345 913 aa18.3■□□□□ 0.52
SRGAP3-212ENST00000520860 FKBP8Q14318 412 aa18.3■□□□□ 0.52
SRGAP3-212ENST00000520860 PCNTO95613 3336 aa18.3■□□□□ 0.52
SRGAP3-212ENST00000520860 WASHC2AQ641Q2 1341 aa18.29■□□□□ 0.52
SRGAP3-212ENST00000520860 USP42Q9H9J4 1324 aaKnown RBP18.29■□□□□ 0.52
SRGAP3-212ENST00000520860 HSP90AB1P08238 724 aaKnown RBP18.29■□□□□ 0.52
SRGAP3-212ENST00000520860 KDM6AO15550 1401 aaPredicted RBP18.29■□□□□ 0.52
SRGAP3-212ENST00000520860 MYH14Q7Z406 1995 aaKnown RBP18.28■□□□□ 0.52
SRGAP3-212ENST00000520860 CRKLP46109 303 aaKnown RBP18.27■□□□□ 0.52
SRGAP3-212ENST00000520860 POLRMTO00411 1230 aaKnown RBP18.26■□□□□ 0.51
SRGAP3-212ENST00000520860 CABP4P57796 275 aa18.26■□□□□ 0.51
SRGAP3-212ENST00000520860 PTCD1O75127 700 aaKnown RBP18.25■□□□□ 0.51
SRGAP3-212ENST00000520860 MKRN1Q9UHC7 482 aaKnown RBP18.25■□□□□ 0.51
SRGAP3-212ENST00000520860 DPY19L2Q6NUT2 758 aa18.24■□□□□ 0.51
SRGAP3-212ENST00000520860 CREBZFQ9NS37 354 aa18.24■□□□□ 0.51
SRGAP3-212ENST00000520860 ANKRD26Q9UPS8 1709 aa18.23■□□□□ 0.51
SRGAP3-212ENST00000520860 ZPR1O75312 459 aa18.23■□□□□ 0.51
SRGAP3-212ENST00000520860 TM4SF1P30408 202 aa18.23■□□□□ 0.51
SRGAP3-212ENST00000520860 CDCA8Q53HL2 280 aa18.23■□□□□ 0.51
SRGAP3-212ENST00000520860 PRDM10Q9NQV6 1147 aa18.23■□□□□ 0.51
SRGAP3-212ENST00000520860 TTLL6Q8N841 843 aa18.22■□□□□ 0.51
SRGAP3-212ENST00000520860 TIAM2Q8IVF5 1701 aa18.21■□□□□ 0.51
SRGAP3-212ENST00000520860 FOXN1O15353 648 aa18.21■□□□□ 0.51
SRGAP3-212ENST00000520860 PLEKHO1Q53GL0 409 aaPredicted RBP18.21■□□□□ 0.51
SRGAP3-212ENST00000520860 ZNF530Q6P9A1 599 aaPredicted RBP18.21■□□□□ 0.51
SRGAP3-212ENST00000520860 CARD14Q9BXL6 1004 aa18.21■□□□□ 0.51
SRGAP3-212ENST00000520860 POTECB2RU33 542 aa18.2■□□□□ 0.5
SRGAP3-212ENST00000520860 EIF4A2Q14240 407 aaKnown RBP18.2■□□□□ 0.5
SRGAP3-212ENST00000520860 USPL1Q5W0Q7 1092 aa18.2■□□□□ 0.5
SRGAP3-212ENST00000520860 CHADLQ6NUI6 762 aa18.2■□□□□ 0.5
SRGAP3-212ENST00000520860 AIDAQ96BJ3 306 aa18.2■□□□□ 0.5
SRGAP3-212ENST00000520860 CTCFP49711 727 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms