RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 CNTLNQ9NXG0 1405 aa10.92□□□□□ -0.66
SHPRH-208ENST00000520752 ABCC8Q09428 1581 aa10.92□□□□□ -0.66
SHPRH-208ENST00000520752 HSP90B1P14625 803 aaKnown RBP10.92□□□□□ -0.66
SHPRH-208ENST00000520752 FSHRP23945 695 aa10.92□□□□□ -0.66
SHPRH-208ENST00000520752 DHX9Q08211 1270 aaKnown RBP10.92□□□□□ -0.66
SHPRH-208ENST00000520752 KIAA1211Q6ZU35 1233 aa10.92□□□□□ -0.66
SHPRH-208ENST00000520752 RAB3GAP2Q9H2M9 1393 aa10.91□□□□□ -0.66
SHPRH-208ENST00000520752 USP17L3A6NCW0 530 aa10.91□□□□□ -0.66
SHPRH-208ENST00000520752 USP17L4A6NCW7 530 aa10.91□□□□□ -0.66
SHPRH-208ENST00000520752 ERVH48-1M5A8F1 160 aa10.91□□□□□ -0.66
SHPRH-208ENST00000520752 TNFRSF10AO00220 468 aa10.91□□□□□ -0.66
SHPRH-208ENST00000520752 BECN1Q14457 450 aa10.91□□□□□ -0.66
SHPRH-208ENST00000520752 USP17L2Q6R6M4 530 aa10.91□□□□□ -0.66
SHPRH-208ENST00000520752 USP17L1Q7RTZ2 530 aa10.91□□□□□ -0.66
SHPRH-208ENST00000520752 CHMP4AQ9BY43 222 aa10.91□□□□□ -0.66
SHPRH-208ENST00000520752 DOLKQ9UPQ8 538 aa10.91□□□□□ -0.66
SHPRH-208ENST00000520752 CCDC88BA6NC98 1476 aa10.9□□□□□ -0.66
SHPRH-208ENST00000520752 TTC24A2A3L6 582 aaPredicted RBP10.9□□□□□ -0.66
SHPRH-208ENST00000520752 RFX1P22670 979 aa10.9□□□□□ -0.66
SHPRH-208ENST00000520752 CCDC116Q8IYX3 515 aa10.9□□□□□ -0.66
SHPRH-208ENST00000520752 PBXIP1Q96AQ6 731 aa10.9□□□□□ -0.66
SHPRH-208ENST00000520752 CCDC94Q9BW85 323 aaPredicted RBP10.9□□□□□ -0.66
SHPRH-208ENST00000520752 NR3C2P08235 984 aa10.89□□□□□ -0.67
SHPRH-208ENST00000520752 NCOA4Q13772 614 aa10.89□□□□□ -0.67
SHPRH-208ENST00000520752 HS1BP3Q53T59 392 aa10.89□□□□□ -0.67
SHPRH-208ENST00000520752 KANK4Q5T7N3 995 aaPredicted RBP10.89□□□□□ -0.67
SHPRH-208ENST00000520752 CDCA7Q9BWT1 371 aaPredicted RBP10.89□□□□□ -0.67
SHPRH-208ENST00000520752 POGKQ9P215 609 aa10.89□□□□□ -0.67
SHPRH-208ENST00000520752 PCDHB11Q9Y5F2 797 aa10.89□□□□□ -0.67
SHPRH-208ENST00000520752 WASF2Q9Y6W5 498 aa10.89□□□□□ -0.67
SHPRH-208ENST00000520752 CCDC144AA2RUR9 1427 aa10.89□□□□□ -0.67
SHPRH-208ENST00000520752 J3QL48 77 aa10.88□□□□□ -0.67
SHPRH-208ENST00000520752 PTMSP20962 102 aa10.88□□□□□ -0.67
SHPRH-208ENST00000520752 RIPK4P57078 832 aa10.88□□□□□ -0.67
SHPRH-208ENST00000520752 RAB15P59190 212 aa10.88□□□□□ -0.67
SHPRH-208ENST00000520752 USP4Q13107 963 aa10.88□□□□□ -0.67
SHPRH-208ENST00000520752 EML3Q32P44 896 aa10.88□□□□□ -0.67
SHPRH-208ENST00000520752 AKNAQ7Z591 1439 aa10.88□□□□□ -0.67
SHPRH-208ENST00000520752 DEPDC4Q8N2C3 294 aa10.88□□□□□ -0.67
SHPRH-208ENST00000520752 VRTNQ9H8Y1 702 aa10.88□□□□□ -0.67
SHPRH-208ENST00000520752 SOGA1O94964 1423 aa10.87□□□□□ -0.67
SHPRH-208ENST00000520752 CLGNO14967 610 aa10.87□□□□□ -0.67
SHPRH-208ENST00000520752 ZSCAN20P17040 1043 aaPredicted RBP10.87□□□□□ -0.67
SHPRH-208ENST00000520752 SMPD1P17405 629 aa10.87□□□□□ -0.67
SHPRH-208ENST00000520752 CDK11BP21127 795 aaKnown RBP10.87□□□□□ -0.67
SHPRH-208ENST00000520752 MMP14P50281 582 aa10.87□□□□□ -0.67
SHPRH-208ENST00000520752 NNTQ13423 1086 aa10.87□□□□□ -0.67
SHPRH-208ENST00000520752 AXDND1Q5T1B0 1012 aaPredicted RBP10.87□□□□□ -0.67
SHPRH-208ENST00000520752 PPP1R26Q5T8A7 1209 aaPredicted RBP10.87□□□□□ -0.67
SHPRH-208ENST00000520752 SIRT1Q96EB6 747 aa10.87□□□□□ -0.67
SHPRH-208ENST00000520752 EMILIN1Q9Y6C2 1016 aa10.87□□□□□ -0.67
SHPRH-208ENST00000520752 ERICH3Q5RHP9 1530 aa10.87□□□□□ -0.67
SHPRH-208ENST00000520752 BAZ1AQ9NRL2 1556 aaPredicted RBP10.86□□□□□ -0.67
SHPRH-208ENST00000520752 SCAPERQ9BY12 1400 aa10.86□□□□□ -0.67
SHPRH-208ENST00000520752 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.86□□□□□ -0.67
SHPRH-208ENST00000520752 IRX3P78415 501 aaPredicted RBP10.86□□□□□ -0.67
SHPRH-208ENST00000520752 SIN3AQ96ST3 1273 aa10.86□□□□□ -0.67
SHPRH-208ENST00000520752 MKRN1Q9UHC7 482 aaKnown RBP10.86□□□□□ -0.67
SHPRH-208ENST00000520752 PDZRN3Q9UPQ7 1066 aa10.86□□□□□ -0.67
SHPRH-208ENST00000520752 NOD1Q9Y239 953 aa10.86□□□□□ -0.67
SHPRH-208ENST00000520752 ABCA5Q8WWZ7 1642 aa10.85□□□□□ -0.67
SHPRH-208ENST00000520752 ATP5J2-PTCD1G3V325 749 aa10.85□□□□□ -0.67
SHPRH-208ENST00000520752 ERVK-9P63128 1117 aa10.85□□□□□ -0.67
SHPRH-208ENST00000520752 OXLD1Q5BKU9 147 aa10.85□□□□□ -0.67
SHPRH-208ENST00000520752 ZSCAN30Q86W11 494 aa10.85□□□□□ -0.67
SHPRH-208ENST00000520752 ZNF830Q96NB3 372 aaPredicted RBP10.85□□□□□ -0.67
SHPRH-208ENST00000520752 PRKRIP1Q9H875 184 aaPredicted RBP10.85□□□□□ -0.67
SHPRH-208ENST00000520752 MRS2Q9HD23 443 aa10.85□□□□□ -0.67
SHPRH-208ENST00000520752 TMPRSS4Q9NRS4 437 aa10.85□□□□□ -0.67
SHPRH-208ENST00000520752 PGPEP1Q9NXJ5 209 aa10.85□□□□□ -0.67
SHPRH-208ENST00000520752 RRP1P56182 461 aaKnown RBP10.84□□□□□ -0.67
SHPRH-208ENST00000520752 CCDC173Q0VFZ6 552 aa10.84□□□□□ -0.67
SHPRH-208ENST00000520752 DNAJC2Q99543 621 aaKnown RBP10.84□□□□□ -0.67
SHPRH-208ENST00000520752 KLF16Q9BXK1 252 aaPredicted RBP10.84□□□□□ -0.67
SHPRH-208ENST00000520752 TSPYL1Q9H0U9 437 aa10.84□□□□□ -0.67
SHPRH-208ENST00000520752 ZHX1Q9UKY1 873 aaPredicted RBP10.84□□□□□ -0.67
SHPRH-208ENST00000520752 MAP3K1Q13233 1512 aa10.84□□□□□ -0.67
SHPRH-208ENST00000520752 KTN1Q86UP2 1357 aaKnown RBP10.83□□□□□ -0.68
SHPRH-208ENST00000520752 PDE3BQ13370 1112 aa10.83□□□□□ -0.68
SHPRH-208ENST00000520752 CC2D2BQ6DHV5 1058 aa10.83□□□□□ -0.68
SHPRH-208ENST00000520752 TRIM50Q86XT4 487 aa10.83□□□□□ -0.68
SHPRH-208ENST00000520752 ZNF784Q8NCA9 323 aaPredicted RBP10.83□□□□□ -0.68
SHPRH-208ENST00000520752 RGS22Q8NE09 1264 aa10.83□□□□□ -0.68
SHPRH-208ENST00000520752 SECISBP2LQ93073 1101 aaKnown RBP10.83□□□□□ -0.68
SHPRH-208ENST00000520752 GRPEL1Q9HAV7 217 aa10.83□□□□□ -0.68
SHPRH-208ENST00000520752 TONSLQ96HA7 1378 aa10.82□□□□□ -0.68
SHPRH-208ENST00000520752 LILRA1O75019 489 aa10.82□□□□□ -0.68
SHPRH-208ENST00000520752 ATG7O95352 703 aa10.82□□□□□ -0.68
SHPRH-208ENST00000520752 MYCP01106 439 aaPredicted RBP10.82□□□□□ -0.68
SHPRH-208ENST00000520752 MCM5P33992 734 aa10.82□□□□□ -0.68
SHPRH-208ENST00000520752 SCTRP47872 440 aa10.82□□□□□ -0.68
SHPRH-208ENST00000520752 PPP1R9BQ96SB3 815 aa10.82□□□□□ -0.68
SHPRH-208ENST00000520752 YY1AP1Q9H869 796 aa10.82□□□□□ -0.68
SHPRH-208ENST00000520752 DNTTIP2Q5QJE6 756 aaKnown RBP10.81□□□□□ -0.68
SHPRH-208ENST00000520752 ZNF622Q969S3 477 aaKnown RBP eCLIP10.81□□□□□ -0.68
SHPRH-208ENST00000520752 PCDHGA11Q9Y5H2 935 aa10.81□□□□□ -0.68
SHPRH-208ENST00000520752 SYNJ1O43426 1573 aa10.81□□□□□ -0.68
SHPRH-208ENST00000520752 FAM196BA6NMK8 535 aa10.8□□□□□ -0.68
SHPRH-208ENST00000520752 ZNF500O60304 480 aaPredicted RBP10.8□□□□□ -0.68
SHPRH-208ENST00000520752 ATP1A2P50993 1020 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms