RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 FURINP09958 794 aa6.67□□□□□ -1.34
TRAPPC13-212ENST00000520525 ABL2P42684 1182 aa6.67□□□□□ -1.34
TRAPPC13-212ENST00000520525 CYP2U1Q7Z449 544 aa6.67□□□□□ -1.34
TRAPPC13-212ENST00000520525 PHTF2Q8N3S3 785 aa6.67□□□□□ -1.34
TRAPPC13-212ENST00000520525 GAS2L1Q99501 681 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC13-212ENST00000520525 PRM3Q9NNZ6 103 aa6.67□□□□□ -1.34
TRAPPC13-212ENST00000520525 KRTAP9-6A0A140TA67 174 aa6.66□□□□□ -1.34
TRAPPC13-212ENST00000520525 MEN1O00255 615 aa6.66□□□□□ -1.34
TRAPPC13-212ENST00000520525 COL8A1P27658 744 aa6.66□□□□□ -1.34
TRAPPC13-212ENST00000520525 EIF4G2P78344 907 aaKnown RBP eCLIP6.66□□□□□ -1.34
TRAPPC13-212ENST00000520525 CLN3Q13286 438 aa6.66□□□□□ -1.34
TRAPPC13-212ENST00000520525 TSGA10IPQ3SY00 556 aa6.66□□□□□ -1.34
TRAPPC13-212ENST00000520525 PSMG3-AS1Q96PY0 264 aa6.66□□□□□ -1.34
TRAPPC13-212ENST00000520525 ARHGEF10LQ9HCE6 1279 aa6.66□□□□□ -1.34
TRAPPC13-212ENST00000520525 NSFL1CQ9UNZ2 370 aaKnown RBP6.66□□□□□ -1.34
TRAPPC13-212ENST00000520525 OXCT2Q9BYC2 517 aaPredicted RBP6.65□□□□□ -1.34
TRAPPC13-212ENST00000520525 GRIP2Q9C0E4 1043 aa6.65□□□□□ -1.34
TRAPPC13-212ENST00000520525 RAB6BQ9NRW1 208 aa6.65□□□□□ -1.34
TRAPPC13-212ENST00000520525 CHIC2Q9UKJ5 165 aa6.65□□□□□ -1.34
TRAPPC13-212ENST00000520525 COG6Q9Y2V7 657 aa6.65□□□□□ -1.34
TRAPPC13-212ENST00000520525 SHISA8B8ZZ34 492 aa6.64□□□□□ -1.35
TRAPPC13-212ENST00000520525 NBPF10Q6P3W6 841 aaKnown RBP6.64□□□□□ -1.35
TRAPPC13-212ENST00000520525 C1orf229Q6ZS94 237 aaPredicted RBP6.64□□□□□ -1.35
TRAPPC13-212ENST00000520525 ALYREFQ86V81 257 aaKnown RBP6.64□□□□□ -1.35
TRAPPC13-212ENST00000520525 NBPF15Q8N660 670 aa6.64□□□□□ -1.35
TRAPPC13-212ENST00000520525 GNRH1P01148 92 aa6.63□□□□□ -1.35
TRAPPC13-212ENST00000520525 IL2RAP01589 272 aa6.63□□□□□ -1.35
TRAPPC13-212ENST00000520525 MAP2K3P46734 347 aa6.63□□□□□ -1.35
TRAPPC13-212ENST00000520525 WASHC4Q2M389 1173 aa6.63□□□□□ -1.35
TRAPPC13-212ENST00000520525 WDR44Q5JSH3 913 aa6.63□□□□□ -1.35
TRAPPC13-212ENST00000520525 MKL2Q9ULH7 1088 aa6.63□□□□□ -1.35
TRAPPC13-212ENST00000520525 DOLKQ9UPQ8 538 aa6.63□□□□□ -1.35
TRAPPC13-212ENST00000520525 HRH3Q9Y5N1 445 aa6.63□□□□□ -1.35
TRAPPC13-212ENST00000520525 SPATA31C2B4DYI2 1134 aa6.62□□□□□ -1.35
TRAPPC13-212ENST00000520525 F11P03951 625 aa6.62□□□□□ -1.35
TRAPPC13-212ENST00000520525 SLFNL1Q499Z3 407 aa6.62□□□□□ -1.35
TRAPPC13-212ENST00000520525 SLC27A3Q5K4L6 730 aa6.62□□□□□ -1.35
TRAPPC13-212ENST00000520525 RNF135Q8IUD6 432 aa6.62□□□□□ -1.35
TRAPPC13-212ENST00000520525 KLRG1Q96E93 195 aa6.62□□□□□ -1.35
TRAPPC13-212ENST00000520525 POM121Q96HA1 1249 aa6.62□□□□□ -1.35
TRAPPC13-212ENST00000520525 NLRP3Q96P20 1036 aa6.62□□□□□ -1.35
TRAPPC13-212ENST00000520525 CFHR5Q9BXR6 569 aa6.62□□□□□ -1.35
TRAPPC13-212ENST00000520525 NUCKS1Q9H1E3 243 aaKnown RBP6.62□□□□□ -1.35
TRAPPC13-212ENST00000520525 STAU1O95793 577 aaKnown RBP6.61□□□□□ -1.35
TRAPPC13-212ENST00000520525 MYCP01106 439 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC13-212ENST00000520525 THBS1P07996 1170 aa6.61□□□□□ -1.35
TRAPPC13-212ENST00000520525 LINC00114Q6XXX2 140 aa6.61□□□□□ -1.35
TRAPPC13-212ENST00000520525 CNKSR1Q969H4 720 aa6.61□□□□□ -1.35
TRAPPC13-212ENST00000520525 ESYT1Q9BSJ8 1104 aa6.61□□□□□ -1.35
TRAPPC13-212ENST00000520525 TIMMDC1Q9NPL8 285 aa6.61□□□□□ -1.35
TRAPPC13-212ENST00000520525 TIMELESSQ9UNS1 1208 aa6.61□□□□□ -1.35
TRAPPC13-212ENST00000520525 HOXB4P17483 251 aaPredicted RBP6.6□□□□□ -1.35
TRAPPC13-212ENST00000520525 FLIIQ13045 1269 aa6.6□□□□□ -1.35
TRAPPC13-212ENST00000520525 OXLD1Q5BKU9 147 aa6.6□□□□□ -1.35
TRAPPC13-212ENST00000520525 EDARADDQ8WWZ3 215 aa6.6□□□□□ -1.35
TRAPPC13-212ENST00000520525 SOX11P35716 441 aa6.59□□□□□ -1.35
TRAPPC13-212ENST00000520525 CENPCQ03188 943 aa6.59□□□□□ -1.35
TRAPPC13-212ENST00000520525 ERICH6Q7L0X2 663 aa6.59□□□□□ -1.35
TRAPPC13-212ENST00000520525 C14orf37Q86TY3 774 aa6.59□□□□□ -1.35
TRAPPC13-212ENST00000520525 XAGE2Q96GT9 111 aa6.59□□□□□ -1.35
TRAPPC13-212ENST00000520525 FHDC1Q9C0D6 1143 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC13-212ENST00000520525 ESF1Q9H501 851 aaKnown RBP6.59□□□□□ -1.35
TRAPPC13-212ENST00000520525 SUV39H2Q9H5I1 410 aa6.59□□□□□ -1.35
TRAPPC13-212ENST00000520525 RRAGCQ9HB90 399 aa6.59□□□□□ -1.35
TRAPPC13-212ENST00000520525 ETNK1Q9HBU6 452 aa6.59□□□□□ -1.35
TRAPPC13-212ENST00000520525 PIK3CDO00329 1044 aa6.58□□□□□ -1.36
TRAPPC13-212ENST00000520525 WASLO00401 505 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC13-212ENST00000520525 USP4Q13107 963 aa6.58□□□□□ -1.36
TRAPPC13-212ENST00000520525 TAS1R3Q7RTX0 852 aa6.58□□□□□ -1.36
TRAPPC13-212ENST00000520525 KRTAP1-3Q8IUG1 177 aa6.58□□□□□ -1.36
TRAPPC13-212ENST00000520525 PLPP7Q8NBV4 271 aa6.58□□□□□ -1.36
TRAPPC13-212ENST00000520525 GDF2Q9UK05 429 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC13-212ENST00000520525 C1QTNF9BB2RNN3 333 aa6.57□□□□□ -1.36
TRAPPC13-212ENST00000520525 ITGB7P26010 798 aa6.57□□□□□ -1.36
TRAPPC13-212ENST00000520525 SCNN1DP51172 638 aa6.57□□□□□ -1.36
TRAPPC13-212ENST00000520525 SEMA3FQ13275 785 aa6.57□□□□□ -1.36
TRAPPC13-212ENST00000520525 GRIN2CQ14957 1233 aa6.57□□□□□ -1.36
TRAPPC13-212ENST00000520525 ALG2Q9H553 416 aa6.57□□□□□ -1.36
TRAPPC13-212ENST00000520525 UBAP2LQ14157 1087 aaKnown RBP6.56□□□□□ -1.36
TRAPPC13-212ENST00000520525 MAP7D1Q3KQU3 841 aa6.56□□□□□ -1.36
TRAPPC13-212ENST00000520525 CD163Q86VB7 1156 aa6.56□□□□□ -1.36
TRAPPC13-212ENST00000520525 GOLGA6L1Q8N7Z2 621 aa6.56□□□□□ -1.36
TRAPPC13-212ENST00000520525 PHF24Q9UPV7 400 aa6.56□□□□□ -1.36
TRAPPC13-212ENST00000520525 C2CD2LO14523 706 aa6.55□□□□□ -1.36
TRAPPC13-212ENST00000520525 ESCO1Q5FWF5 840 aa6.55□□□□□ -1.36
TRAPPC13-212ENST00000520525 ZSCAN10Q96SZ4 725 aaPredicted RBP6.55□□□□□ -1.36
TRAPPC13-212ENST00000520525 GPAMQ9HCL2 828 aa6.55□□□□□ -1.36
TRAPPC13-212ENST00000520525 POM121CA8CG34 1229 aa6.54□□□□□ -1.36
TRAPPC13-212ENST00000520525 PHKA2P46019 1235 aa6.54□□□□□ -1.36
TRAPPC13-212ENST00000520525 GDF10P55107 478 aa6.54□□□□□ -1.36
TRAPPC13-212ENST00000520525 C4orf17Q53FE4 359 aa6.54□□□□□ -1.36
TRAPPC13-212ENST00000520525 ADAMTS19Q8TE59 1207 aa6.54□□□□□ -1.36
TRAPPC13-212ENST00000520525 SIRT1Q96EB6 747 aa6.54□□□□□ -1.36
TRAPPC13-212ENST00000520525 BTBD6Q96KE9 485 aa6.54□□□□□ -1.36
TRAPPC13-212ENST00000520525 GNB5O14775 395 aa6.53□□□□□ -1.36
TRAPPC13-212ENST00000520525 INHAP05111 366 aa6.53□□□□□ -1.36
TRAPPC13-212ENST00000520525 UBTFP17480 764 aaKnown RBP6.53□□□□□ -1.36
TRAPPC13-212ENST00000520525 TLR1Q15399 786 aa6.53□□□□□ -1.36
TRAPPC13-212ENST00000520525 A0A1B0GTH6 734 aa6.52□□□□□ -1.37
TRAPPC13-212ENST00000520525 TMEM229AB2RXF0 380 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms