RNA–Protein interactions for RNA: ENST00000520163.1

AC109479.3-201, humanhuman

TSL 3 BASIC

Gene AC109479.3, Length 360 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC109479.3-201ENST00000520163 ITGB4P16144 1822 aa18.13■□□□□ 0.49
AC109479.3-201ENST00000520163 KIAA1551Q9HCM1 1747 aa18.12■□□□□ 0.49
AC109479.3-201ENST00000520163 KLRG1Q96E93 195 aa18.12■□□□□ 0.49
AC109479.3-201ENST00000520163 SLC4A9Q96Q91 983 aa18.12■□□□□ 0.49
AC109479.3-201ENST00000520163 SPG7Q9UQ90 795 aa18.12■□□□□ 0.49
AC109479.3-201ENST00000520163 PKD1L3Q7Z443 1732 aa18.12■□□□□ 0.49
AC109479.3-201ENST00000520163 FCHSD2O94868 740 aa18.11■□□□□ 0.49
AC109479.3-201ENST00000520163 KCNA3P22001 575 aa18.11■□□□□ 0.49
AC109479.3-201ENST00000520163 TMF1P82094 1093 aa18.11■□□□□ 0.49
AC109479.3-201ENST00000520163 C9orf131Q5VYM1 1079 aa18.11■□□□□ 0.49
AC109479.3-201ENST00000520163 JMYQ8N9B5 988 aa18.11■□□□□ 0.49
AC109479.3-201ENST00000520163 EYA1Q99502 592 aa18.11■□□□□ 0.49
AC109479.3-201ENST00000520163 PCNTO95613 3336 aa18.1■□□□□ 0.49
AC109479.3-201ENST00000520163 KDRP35968 1356 aa18.1■□□□□ 0.49
AC109479.3-201ENST00000520163 TONSLQ96HA7 1378 aa18.1■□□□□ 0.49
AC109479.3-201ENST00000520163 PHKG2P15735 406 aa18.1■□□□□ 0.49
AC109479.3-201ENST00000520163 TRAPPC3LQ5T215 181 aa18.1■□□□□ 0.49
AC109479.3-201ENST00000520163 NLGN1Q8N2Q7 840 aa18.1■□□□□ 0.49
AC109479.3-201ENST00000520163 ARHGEF1Q92888 912 aaKnown RBP18.1■□□□□ 0.49
AC109479.3-201ENST00000520163 CARD14Q9BXL6 1004 aa18.1■□□□□ 0.49
AC109479.3-201ENST00000520163 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.1■□□□□ 0.49
AC109479.3-201ENST00000520163 RTCBQ9Y3I0 505 aaKnown RBP18.1■□□□□ 0.49
AC109479.3-201ENST00000520163 SLC24A1O60721 1099 aa18.09■□□□□ 0.49
AC109479.3-201ENST00000520163 GYS1P13807 737 aa18.09■□□□□ 0.49
AC109479.3-201ENST00000520163 KIF13BQ9NQT8 1826 aa18.08■□□□□ 0.48
AC109479.3-201ENST00000520163 IFNL2Q8IZJ0 200 aa18.08■□□□□ 0.48
AC109479.3-201ENST00000520163 CCDC87Q9NVE4 849 aa18.08■□□□□ 0.48
AC109479.3-201ENST00000520163 N4BP2Q86UW6 1770 aaPredicted RBP18.07■□□□□ 0.48
AC109479.3-201ENST00000520163 PPM1GO15355 546 aaPredicted RBP18.07■□□□□ 0.48
AC109479.3-201ENST00000520163 WASHC2AQ641Q2 1341 aa18.06■□□□□ 0.48
AC109479.3-201ENST00000520163 CAPN15O75808 1086 aa18.06■□□□□ 0.48
AC109479.3-201ENST00000520163 FSTL1Q12841 308 aa18.06■□□□□ 0.48
AC109479.3-201ENST00000520163 RC3H1Q5TC82 1133 aaKnown RBP18.06■□□□□ 0.48
AC109479.3-201ENST00000520163 KCPQ6ZWJ8 1503 aa18.05■□□□□ 0.48
AC109479.3-201ENST00000520163 ADRA2BP18089 450 aa18.05■□□□□ 0.48
AC109479.3-201ENST00000520163 C16orf71Q8IYS4 520 aaPredicted RBP18.05■□□□□ 0.48
AC109479.3-201ENST00000520163 DCAF5Q96JK2 942 aa18.05■□□□□ 0.48
AC109479.3-201ENST00000520163 WDR90Q96KV7 1748 aa18.05■□□□□ 0.48
AC109479.3-201ENST00000520163 RPS6KA4O75676 772 aa18.04■□□□□ 0.48
AC109479.3-201ENST00000520163 RBM42Q9BTD8 480 aaKnown RBP18.04■□□□□ 0.48
AC109479.3-201ENST00000520163 PARP3Q9Y6F1 533 aa18.04■□□□□ 0.48
AC109479.3-201ENST00000520163 PLEKHG2Q9H7P9 1386 aa18.04■□□□□ 0.48
AC109479.3-201ENST00000520163 CNTNAP4Q9C0A0 1308 aa18.03■□□□□ 0.48
AC109479.3-201ENST00000520163 RFC4P35249 363 aa18.03■□□□□ 0.48
AC109479.3-201ENST00000520163 RRAGCQ9HB90 399 aa18.03■□□□□ 0.48
AC109479.3-201ENST00000520163 PIM2Q9P1W9 311 aa18.03■□□□□ 0.48
AC109479.3-201ENST00000520163 C4AP0C0L4 1744 aa18.02■□□□□ 0.48
AC109479.3-201ENST00000520163 TNS4Q8IZW8 715 aa18.02■□□□□ 0.48
AC109479.3-201ENST00000520163 RNF181Q9P0P0 153 aa18.02■□□□□ 0.48
AC109479.3-201ENST00000520163 DDR1Q08345 913 aa18.01■□□□□ 0.47
AC109479.3-201ENST00000520163 DALRD3Q5D0E6 543 aaKnown RBP18.01■□□□□ 0.47
AC109479.3-201ENST00000520163 POLKQ9UBT6 870 aa18.01■□□□□ 0.47
AC109479.3-201ENST00000520163 SRP68Q9UHB9 627 aaKnown RBP18.01■□□□□ 0.47
AC109479.3-201ENST00000520163 KDM2BQ8NHM5 1336 aa18■□□□□ 0.47
AC109479.3-201ENST00000520163 ERVV-2B6SEH9 535 aa18■□□□□ 0.47
AC109479.3-201ENST00000520163 CHRNA5P30532 468 aa18■□□□□ 0.47
AC109479.3-201ENST00000520163 FKBP8Q14318 412 aa18■□□□□ 0.47
AC109479.3-201ENST00000520163 PRELPP51888 382 aa17.99■□□□□ 0.47
AC109479.3-201ENST00000520163 EIF4A2Q14240 407 aaKnown RBP17.99■□□□□ 0.47
AC109479.3-201ENST00000520163 KIF20BQ96Q89 1820 aa17.99■□□□□ 0.47
AC109479.3-201ENST00000520163 BRCA1P38398 1863 aaKnown RBP17.98■□□□□ 0.47
AC109479.3-201ENST00000520163 SMC1BQ8NDV3 1235 aa17.97■□□□□ 0.47
AC109479.3-201ENST00000520163 KDM6AO15550 1401 aaPredicted RBP17.97■□□□□ 0.47
AC109479.3-201ENST00000520163 USP42Q9H9J4 1324 aaKnown RBP17.97■□□□□ 0.47
AC109479.3-201ENST00000520163 CRKLP46109 303 aaKnown RBP17.96■□□□□ 0.47
AC109479.3-201ENST00000520163 CDCA8Q53HL2 280 aa17.96■□□□□ 0.47
AC109479.3-201ENST00000520163 ANKRD26Q9UPS8 1709 aa17.95■□□□□ 0.46
AC109479.3-201ENST00000520163 PTCD1O75127 700 aaKnown RBP17.95■□□□□ 0.46
AC109479.3-201ENST00000520163 RASSF7Q02833 373 aa17.95■□□□□ 0.46
AC109479.3-201ENST00000520163 ZNF831Q5JPB2 1677 aa17.94■□□□□ 0.46
AC109479.3-201ENST00000520163 POLRMTO00411 1230 aaKnown RBP17.94■□□□□ 0.46
AC109479.3-201ENST00000520163 CABP4P57796 275 aa17.94■□□□□ 0.46
AC109479.3-201ENST00000520163 MYH14Q7Z406 1995 aaKnown RBP17.93■□□□□ 0.46
AC109479.3-201ENST00000520163 COL5A3P25940 1745 aaPredicted RBP17.93■□□□□ 0.46
AC109479.3-201ENST00000520163 HSP90AB1P08238 724 aaKnown RBP17.93■□□□□ 0.46
AC109479.3-201ENST00000520163 HSPA1AP0DMV8 641 aaKnown RBP17.93■□□□□ 0.46
AC109479.3-201ENST00000520163 HSPA1BP0DMV9 641 aaKnown RBP17.93■□□□□ 0.46
AC109479.3-201ENST00000520163 TM4SF1P30408 202 aa17.93■□□□□ 0.46
AC109479.3-201ENST00000520163 ARFGEF1Q9Y6D6 1849 aa17.93■□□□□ 0.46
AC109479.3-201ENST00000520163 ZNF530Q6P9A1 599 aaPredicted RBP17.92■□□□□ 0.46
AC109479.3-201ENST00000520163 INTS5Q6P9B9 1019 aaKnown RBP17.92■□□□□ 0.46
AC109479.3-201ENST00000520163 TNNT2P45379 298 aaPredicted RBP17.91■□□□□ 0.46
AC109479.3-201ENST00000520163 PLEKHO1Q53GL0 409 aaPredicted RBP17.91■□□□□ 0.46
AC109479.3-201ENST00000520163 NFATC2IPQ8NCF5 419 aa17.9■□□□□ 0.46
AC109479.3-201ENST00000520163 GLTPD2A6NH11 291 aa17.89■□□□□ 0.45
AC109479.3-201ENST00000520163 MTHFSP49914 203 aa17.89■□□□□ 0.45
AC109479.3-201ENST00000520163 ZC3H4Q9UPT8 1303 aaKnown RBP17.89■□□□□ 0.45
AC109479.3-201ENST00000520163 VEGFAP15692 232 aaPredicted RBP17.88■□□□□ 0.45
AC109479.3-201ENST00000520163 LMNB1P20700 586 aa17.88■□□□□ 0.45
AC109479.3-201ENST00000520163 USPL1Q5W0Q7 1092 aa17.88■□□□□ 0.45
AC109479.3-201ENST00000520163 AEBP1Q8IUX7 1158 aa17.88■□□□□ 0.45
AC109479.3-201ENST00000520163 TNRC6CQ9HCJ0 1690 aaKnown RBP17.87■□□□□ 0.45
AC109479.3-201ENST00000520163 POTECB2RU33 542 aa17.87■□□□□ 0.45
AC109479.3-201ENST00000520163 AMOTQ4VCS5 1084 aa17.87■□□□□ 0.45
AC109479.3-201ENST00000520163 NFIXQ14938 502 aa17.86■□□□□ 0.45
AC109479.3-201ENST00000520163 SBF1O95248 1867 aa17.85■□□□□ 0.45
AC109479.3-201ENST00000520163 SOS1Q07889 1333 aaPredicted RBP17.85■□□□□ 0.45
AC109479.3-201ENST00000520163 DNAJC10Q8IXB1 793 aa17.85■□□□□ 0.45
AC109479.3-201ENST00000520163 ADAMTS7Q9UKP4 1686 aa17.85■□□□□ 0.45
AC109479.3-201ENST00000520163 NFKBIEO00221 500 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms