RNA–Protein interactions for RNA: ENST00000519604.5

ARFGAP1-212, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 3,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-212ENST00000519604 ADGRB2O60241 1585 aa17.14■□□□□ 0.33
ARFGAP1-212ENST00000519604 RPGRIP1LQ68CZ1 1315 aa17.14■□□□□ 0.33
ARFGAP1-212ENST00000519604 VAMP4O75379 141 aa17.14■□□□□ 0.33
ARFGAP1-212ENST00000519604 YY1AP1Q9H869 796 aa17.14■□□□□ 0.33
ARFGAP1-212ENST00000519604 GADD45BO75293 160 aaPredicted RBP17.13■□□□□ 0.33
ARFGAP1-212ENST00000519604 TMX1Q9H3N1 280 aa17.13■□□□□ 0.33
ARFGAP1-212ENST00000519604 MBD3O95983 291 aa17.13■□□□□ 0.33
ARFGAP1-212ENST00000519604 PRKAR2BP31323 418 aa17.12■□□□□ 0.33
ARFGAP1-212ENST00000519604 SEMA3FQ13275 785 aa17.12■□□□□ 0.33
ARFGAP1-212ENST00000519604 DIAPH1O60610 1272 aaKnown RBP17.12■□□□□ 0.33
ARFGAP1-212ENST00000519604 HMOX1P09601 288 aa17.12■□□□□ 0.33
ARFGAP1-212ENST00000519604 TMX3Q96JJ7 454 aa17.12■□□□□ 0.33
ARFGAP1-212ENST00000519604 ADGRB1O14514 1584 aa17.11■□□□□ 0.33
ARFGAP1-212ENST00000519604 CLSTN1O94985 981 aa17.11■□□□□ 0.33
ARFGAP1-212ENST00000519604 SH3BP1Q9Y3L3 701 aa17.11■□□□□ 0.33
ARFGAP1-212ENST00000519604 TNNT1P13805 278 aa17.1■□□□□ 0.33
ARFGAP1-212ENST00000519604 KIF3AQ9Y496 699 aa17.1■□□□□ 0.33
ARFGAP1-212ENST00000519604 SRPK2P78362 688 aaKnown RBP17.1■□□□□ 0.33
ARFGAP1-212ENST00000519604 CT47A1Q5JQC4 288 aaPredicted RBP17.1■□□□□ 0.33
ARFGAP1-212ENST00000519604 CASC1Q6TDU7 716 aa17.1■□□□□ 0.33
ARFGAP1-212ENST00000519604 PIBF1Q8WXW3 757 aa17.1■□□□□ 0.33
ARFGAP1-212ENST00000519604 MED14O60244 1454 aa17.1■□□□□ 0.33
ARFGAP1-212ENST00000519604 EVC2Q86UK5 1308 aa17.1■□□□□ 0.33
ARFGAP1-212ENST00000519604 CCDC66A2RUB6 948 aa17.1■□□□□ 0.33
ARFGAP1-212ENST00000519604 C14orf93Q9H972 538 aaKnown RBP17.1■□□□□ 0.33
ARFGAP1-212ENST00000519604 ADCY5O95622 1261 aa17.09■□□□□ 0.33
ARFGAP1-212ENST00000519604 PHACTR3Q96KR7 559 aa17.09■□□□□ 0.33
ARFGAP1-212ENST00000519604 BCL2L12Q9HB09 334 aa17.09■□□□□ 0.33
ARFGAP1-212ENST00000519604 ANKRD36BQ8N2N9 1353 aa17.09■□□□□ 0.33
ARFGAP1-212ENST00000519604 DCTPP1Q9H773 170 aa17.09■□□□□ 0.33
ARFGAP1-212ENST00000519604 PRIMPOLQ96LW4 560 aa17.08■□□□□ 0.33
ARFGAP1-212ENST00000519604 TSHZ3Q63HK5 1081 aa17.08■□□□□ 0.32
ARFGAP1-212ENST00000519604 QRICH2Q9H0J4 1663 aa17.08■□□□□ 0.32
ARFGAP1-212ENST00000519604 HMGN5P82970 282 aaKnown RBP17.08■□□□□ 0.32
ARFGAP1-212ENST00000519604 GPATCH11Q8N954 259 aa17.08■□□□□ 0.32
ARFGAP1-212ENST00000519604 NEXMIFQ5QGS0 1516 aa17.07■□□□□ 0.32
ARFGAP1-212ENST00000519604 GOLIM4O00461 696 aa17.07■□□□□ 0.32
ARFGAP1-212ENST00000519604 HCLS1P14317 486 aaPredicted RBP17.07■□□□□ 0.32
ARFGAP1-212ENST00000519604 YEATS2Q9ULM3 1422 aa17.07■□□□□ 0.32
ARFGAP1-212ENST00000519604 ABCC4O15439 1325 aa17.07■□□□□ 0.32
ARFGAP1-212ENST00000519604 REC8O95072 547 aa17.07■□□□□ 0.32
ARFGAP1-212ENST00000519604 BRD1O95696 1058 aa17.07■□□□□ 0.32
ARFGAP1-212ENST00000519604 U2AF2P26368 475 aaKnown RBP eCLIP17.07■□□□□ 0.322e-6■■□□□ 11.9
ARFGAP1-212ENST00000519604 TWISTNBQ3B726 338 aaPredicted RBP17.07■□□□□ 0.32
ARFGAP1-212ENST00000519604 C8orf58Q8NAV2 365 aa17.07■□□□□ 0.32
ARFGAP1-212ENST00000519604 SIRT1Q96EB6 747 aa17.07■□□□□ 0.32
ARFGAP1-212ENST00000519604 ERICH4A6NGS2 130 aa17.06■□□□□ 0.32
ARFGAP1-212ENST00000519604 FYB1O15117 783 aa17.06■□□□□ 0.32
ARFGAP1-212ENST00000519604 PDCL2Q8N4E4 241 aa17.06■□□□□ 0.32
ARFGAP1-212ENST00000519604 SYAP1Q96A49 352 aaPredicted RBP17.06■□□□□ 0.32
ARFGAP1-212ENST00000519604 MBIPQ9NS73 344 aa17.06■□□□□ 0.32
ARFGAP1-212ENST00000519604 A0A1W2PP64 1363 aa17.06■□□□□ 0.32
ARFGAP1-212ENST00000519604 RIMBP3CA6NJZ7 1639 aa17.06■□□□□ 0.32
ARFGAP1-212ENST00000519604 RIMBP3BA6NNM3 1639 aa17.06■□□□□ 0.32
ARFGAP1-212ENST00000519604 RIMBP3Q9UFD9 1639 aa17.06■□□□□ 0.32
ARFGAP1-212ENST00000519604 GTF2A1P52655 376 aaPredicted RBP17.05■□□□□ 0.32
ARFGAP1-212ENST00000519604 USP48Q86UV5 1035 aa17.05■□□□□ 0.32
ARFGAP1-212ENST00000519604 ERC2O15083 957 aa17.05■□□□□ 0.32
ARFGAP1-212ENST00000519604 ARHGAP45Q92619 1136 aa17.05■□□□□ 0.32
ARFGAP1-212ENST00000519604 DIP2BQ9P265 1576 aa17.04■□□□□ 0.32
ARFGAP1-212ENST00000519604 NSD2O96028 1365 aa17.04■□□□□ 0.32
ARFGAP1-212ENST00000519604 KRT24Q2M2I5 525 aa17.04■□□□□ 0.32
ARFGAP1-212ENST00000519604 UPF3BQ9BZI7 483 aaKnown RBP17.04■□□□□ 0.32
ARFGAP1-212ENST00000519604 PALD1Q9ULE6 856 aa17.04■□□□□ 0.32
ARFGAP1-212ENST00000519604 DTNBO60941 627 aa17.03■□□□□ 0.32
ARFGAP1-212ENST00000519604 SPC24Q8NBT2 197 aa17.03■□□□□ 0.32
ARFGAP1-212ENST00000519604 BRPF1P55201 1214 aaPredicted RBP17.03■□□□□ 0.32
ARFGAP1-212ENST00000519604 RNF217Q8TC41 542 aa17.03■□□□□ 0.32
ARFGAP1-212ENST00000519604 PTCH1Q13635 1447 aa17.03■□□□□ 0.32
ARFGAP1-212ENST00000519604 RIOK3O14730 519 aaKnown RBP17.03■□□□□ 0.32
ARFGAP1-212ENST00000519604 STAG3Q9UJ98 1225 aa17.03■□□□□ 0.32
ARFGAP1-212ENST00000519604 PREX1Q8TCU6 1659 aa17.03■□□□□ 0.32
ARFGAP1-212ENST00000519604 GTF2F1P35269 517 aaKnown RBP eCLIP17.02■□□□□ 0.321e-9■■■□□ 18.1
ARFGAP1-212ENST00000519604 DCTN1Q14203 1278 aa17.02■□□□□ 0.32
ARFGAP1-212ENST00000519604 API5Q9BZZ5 524 aaKnown RBP17.02■□□□□ 0.32
ARFGAP1-212ENST00000519604 ZBTB12Q9Y330 459 aaPredicted RBP17.02■□□□□ 0.32
ARFGAP1-212ENST00000519604 PIK3R4Q99570 1358 aa17.02■□□□□ 0.32
ARFGAP1-212ENST00000519604 FAM83GA6ND36 823 aa17.02■□□□□ 0.31
ARFGAP1-212ENST00000519604 FKBP5Q13451 457 aaPredicted RBP17.02■□□□□ 0.31
ARFGAP1-212ENST00000519604 FBXO31Q5XUX0 539 aaPredicted RBP17.02■□□□□ 0.31
ARFGAP1-212ENST00000519604 TOMM22Q9NS69 142 aa17.02■□□□□ 0.31
ARFGAP1-212ENST00000519604 ZNF428Q96B54 188 aa17.01■□□□□ 0.31
ARFGAP1-212ENST00000519604 PYCARDQ9ULZ3 195 aa17.01■□□□□ 0.31
ARFGAP1-212ENST00000519604 ZFYVE9O95405 1425 aa17.01■□□□□ 0.31
ARFGAP1-212ENST00000519604 FCHSD2O94868 740 aa17.01■□□□□ 0.31
ARFGAP1-212ENST00000519604 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.01■□□□□ 0.31
ARFGAP1-212ENST00000519604 MYCBPQ99417 103 aaPredicted RBP17.01■□□□□ 0.31
ARFGAP1-212ENST00000519604 COL3A1P02461 1466 aaPredicted RBP17.01■□□□□ 0.31
ARFGAP1-212ENST00000519604 ARHGEF28Q8N1W1 1705 aaKnown RBP17.01■□□□□ 0.31
ARFGAP1-212ENST00000519604 CEP83Q9Y592 693 aa17.01■□□□□ 0.31
ARFGAP1-212ENST00000519604 MINK1Q8N4C8 1332 aaPredicted RBP17■□□□□ 0.31
ARFGAP1-212ENST00000519604 GNAI1P63096 354 aa17■□□□□ 0.31
ARFGAP1-212ENST00000519604 NFE2L2Q16236 605 aa17■□□□□ 0.31
ARFGAP1-212ENST00000519604 ANKRD44Q8N8A2 993 aa17■□□□□ 0.31
ARFGAP1-212ENST00000519604 REREQ9P2R6 1566 aa17■□□□□ 0.31
ARFGAP1-212ENST00000519604 TULP2O00295 520 aa16.99■□□□□ 0.31
ARFGAP1-212ENST00000519604 CEP85Q6P2H3 762 aa16.99■□□□□ 0.31
ARFGAP1-212ENST00000519604 ANO2Q9NQ90 1003 aa16.99■□□□□ 0.31
ARFGAP1-212ENST00000519604 RSPH14Q9UHP6 348 aa16.99■□□□□ 0.31
ARFGAP1-212ENST00000519604 HSP90AB3PQ58FF7 597 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms