RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 MPRIPQ6WCQ1 1025 aa15.89■□□□□ 0.13
SPIDR-209ENST00000519141 MIS18AQ9NYP9 233 aa15.89■□□□□ 0.13
SPIDR-209ENST00000519141 SIPA1L3O60292 1781 aaPredicted RBP15.89■□□□□ 0.13
SPIDR-209ENST00000519141 ZKSCAN2Q63HK3 967 aa15.89■□□□□ 0.13
SPIDR-209ENST00000519141 RNMTO43148 476 aaKnown RBP15.88■□□□□ 0.13
SPIDR-209ENST00000519141 LGR6Q9HBX8 967 aa15.88■□□□□ 0.13
SPIDR-209ENST00000519141 NRAPQ86VF7 1730 aa15.87■□□□□ 0.13
SPIDR-209ENST00000519141 MS4A1P11836 297 aa15.87■□□□□ 0.13
SPIDR-209ENST00000519141 B4GALNT3Q6L9W6 998 aa15.87■□□□□ 0.13
SPIDR-209ENST00000519141 IFNL2Q8IZJ0 200 aa15.87■□□□□ 0.13
SPIDR-209ENST00000519141 CCDC136Q96JN2 1154 aa15.87■□□□□ 0.13
SPIDR-209ENST00000519141 NWD2Q9ULI1 1742 aa15.87■□□□□ 0.13
SPIDR-209ENST00000519141 IL2RBP14784 551 aa15.86■□□□□ 0.13
SPIDR-209ENST00000519141 PHKG2P15735 406 aa15.86■□□□□ 0.13
SPIDR-209ENST00000519141 SRCAPQ6ZRS2 3230 aa15.86■□□□□ 0.13
SPIDR-209ENST00000519141 IPO8O15397 1037 aaKnown RBP15.86■□□□□ 0.13
SPIDR-209ENST00000519141 BRPF1P55201 1214 aaPredicted RBP15.86■□□□□ 0.13
SPIDR-209ENST00000519141 VPS72Q15906 364 aa15.86■□□□□ 0.13
SPIDR-209ENST00000519141 KRT24Q2M2I5 525 aa15.86■□□□□ 0.13
SPIDR-209ENST00000519141 KDM6AO15550 1401 aaPredicted RBP15.86■□□□□ 0.13
SPIDR-209ENST00000519141 WNK3Q9BYP7 1800 aa15.85■□□□□ 0.13
SPIDR-209ENST00000519141 PCDH11XQ9BZA7 1347 aa15.85■□□□□ 0.13
SPIDR-209ENST00000519141 PCDH11YQ9BZA8 1340 aa15.85■□□□□ 0.13
SPIDR-209ENST00000519141 SHANK3Q9BYB0 1731 aa15.85■□□□□ 0.13
SPIDR-209ENST00000519141 GLI3P10071 1580 aa15.85■□□□□ 0.13
SPIDR-209ENST00000519141 PANK1Q8TE04 598 aa15.85■□□□□ 0.13
SPIDR-209ENST00000519141 SOS1Q07889 1333 aaPredicted RBP15.84■□□□□ 0.13
SPIDR-209ENST00000519141 HSP90AB1P08238 724 aaKnown RBP15.84■□□□□ 0.13
SPIDR-209ENST00000519141 FTSJ3Q8IY81 847 aaKnown RBP15.84■□□□□ 0.13
SPIDR-209ENST00000519141 PELP1Q8IZL8 1130 aaKnown RBP15.84■□□□□ 0.13
SPIDR-209ENST00000519141 MRPL50Q8N5N7 158 aaKnown RBP15.84■□□□□ 0.13
SPIDR-209ENST00000519141 NOB1Q9ULX3 412 aaKnown RBP15.84■□□□□ 0.13
SPIDR-209ENST00000519141 MRC1P22897 1456 aa15.84■□□□□ 0.13
SPIDR-209ENST00000519141 CYP27B1O15528 508 aa15.83■□□□□ 0.13
SPIDR-209ENST00000519141 ATF7IPQ6VMQ6 1270 aa15.83■□□□□ 0.13
SPIDR-209ENST00000519141 ZCRB1Q8TBF4 217 aaKnown RBP15.83■□□□□ 0.13
SPIDR-209ENST00000519141 BTBD11A6QL63 1104 aa15.83■□□□□ 0.12
SPIDR-209ENST00000519141 DZIP1LQ8IYY4 767 aaKnown RBP15.83■□□□□ 0.12
SPIDR-209ENST00000519141 CLUAP1Q96AJ1 413 aa15.83■□□□□ 0.12
SPIDR-209ENST00000519141 DCAF5Q96JK2 942 aa15.83■□□□□ 0.12
SPIDR-209ENST00000519141 USP35Q9P2H5 1018 aa15.83■□□□□ 0.12
SPIDR-209ENST00000519141 TRIM27P14373 513 aa15.82■□□□□ 0.12
SPIDR-209ENST00000519141 TNNQ9UQP3 1299 aa15.82■□□□□ 0.12
SPIDR-209ENST00000519141 COG6Q9Y2V7 657 aa15.82■□□□□ 0.12
SPIDR-209ENST00000519141 TCERG1O14776 1098 aaKnown RBP15.81■□□□□ 0.12
SPIDR-209ENST00000519141 RLBP1P12271 317 aa15.81■□□□□ 0.12
SPIDR-209ENST00000519141 CACNA1FO60840 1977 aa15.81■□□□□ 0.12
SPIDR-209ENST00000519141 ONECUT3O60422 494 aaPredicted RBP15.8■□□□□ 0.12
SPIDR-209ENST00000519141 ARHGAP45Q92619 1136 aa15.8■□□□□ 0.12
SPIDR-209ENST00000519141 CCDC9Q9Y3X0 531 aaKnown RBP15.8■□□□□ 0.12
SPIDR-209ENST00000519141 DISP2A7MBM2 1401 aa15.8■□□□□ 0.12
SPIDR-209ENST00000519141 SLC52A2Q9HAB3 445 aa15.79■□□□□ 0.12
SPIDR-209ENST00000519141 EIF4A1P60842 406 aaKnown RBP15.79■□□□□ 0.12
SPIDR-209ENST00000519141 MVPQ14764 893 aaKnown RBP15.79■□□□□ 0.12
SPIDR-209ENST00000519141 HOXB7P09629 217 aa15.78■□□□□ 0.12
SPIDR-209ENST00000519141 AAMPQ13685 434 aa15.78■□□□□ 0.12
SPIDR-209ENST00000519141 STK31Q9BXU1 1019 aa15.78■□□□□ 0.12
SPIDR-209ENST00000519141 API5Q9BZZ5 524 aaKnown RBP15.78■□□□□ 0.12
SPIDR-209ENST00000519141 CCDC30Q5VVM6 783 aa15.77■□□□□ 0.12
SPIDR-209ENST00000519141 SEPT12Q8IYM1 358 aa15.77■□□□□ 0.12
SPIDR-209ENST00000519141 CHMP4AQ9BY43 222 aa15.77■□□□□ 0.12
SPIDR-209ENST00000519141 KCNQ3O43525 872 aa15.76■□□□□ 0.11
SPIDR-209ENST00000519141 DDX54Q8TDD1 881 aaKnown RBP15.76■□□□□ 0.11
SPIDR-209ENST00000519141 BRWD3Q6RI45 1802 aa15.76■□□□□ 0.11
SPIDR-209ENST00000519141 CABP4P57796 275 aa15.76■□□□□ 0.11
SPIDR-209ENST00000519141 NKX1-1Q15270 411 aaPredicted RBP15.76■□□□□ 0.11
SPIDR-209ENST00000519141 ITPRIPQ8IWB1 547 aa15.76■□□□□ 0.11
SPIDR-209ENST00000519141 NFATC2IPQ8NCF5 419 aa15.76■□□□□ 0.11
SPIDR-209ENST00000519141 CDCA7Q9BWT1 371 aaPredicted RBP15.76■□□□□ 0.11
SPIDR-209ENST00000519141 PTPRCP08575 1304 aa15.76■□□□□ 0.11
SPIDR-209ENST00000519141 SPATA31A1Q5TZJ5 1347 aa15.76■□□□□ 0.11
SPIDR-209ENST00000519141 SPATA31A5Q5VU36 1347 aa15.76■□□□□ 0.11
SPIDR-209ENST00000519141 SPATA31A7Q8IWB4 1347 aa15.76■□□□□ 0.11
SPIDR-209ENST00000519141 SLC4A2P04920 1241 aa15.75■□□□□ 0.11
SPIDR-209ENST00000519141 FAM98CQ17RN3 349 aaKnown RBP15.75■□□□□ 0.11
SPIDR-209ENST00000519141 HDGFL1Q5TGJ6 251 aa15.75■□□□□ 0.11
SPIDR-209ENST00000519141 TMEM57Q8N5G2 664 aa15.75■□□□□ 0.11
SPIDR-209ENST00000519141 DDX19BQ9UMR2 479 aa15.75■□□□□ 0.11
SPIDR-209ENST00000519141 THRAP3Q9Y2W1 955 aaKnown RBP15.75■□□□□ 0.11
SPIDR-209ENST00000519141 ABCC4O15439 1325 aa15.75■□□□□ 0.11
SPIDR-209ENST00000519141 TOGARAM1Q9Y4F4 1720 aa15.75■□□□□ 0.11
SPIDR-209ENST00000519141 TNS2Q63HR2 1409 aa15.75■□□□□ 0.11
SPIDR-209ENST00000519141 ERVV-2B6SEH9 535 aa15.73■□□□□ 0.11
SPIDR-209ENST00000519141 ZNF790Q6PG37 636 aa15.73■□□□□ 0.11
SPIDR-209ENST00000519141 HEG1Q9ULI3 1381 aa15.73■□□□□ 0.11
SPIDR-209ENST00000519141 PAPPAQ13219 1627 aa15.73■□□□□ 0.11
SPIDR-209ENST00000519141 C5P01031 1676 aa15.73■□□□□ 0.11
SPIDR-209ENST00000519141 TTC5Q8N0Z6 440 aa15.73■□□□□ 0.11
SPIDR-209ENST00000519141 NECTIN2Q92692 538 aa15.73■□□□□ 0.11
SPIDR-209ENST00000519141 UBR2Q8IWV8 1755 aa15.71■□□□□ 0.11
SPIDR-209ENST00000519141 EXOC5O00471 708 aa15.71■□□□□ 0.11
SPIDR-209ENST00000519141 GIGYF1O75420 1035 aaPredicted RBP15.71■□□□□ 0.11
SPIDR-209ENST00000519141 SLC39A6Q13433 755 aa15.71■□□□□ 0.11
SPIDR-209ENST00000519141 KRT27Q7Z3Y8 459 aa15.71■□□□□ 0.11
SPIDR-209ENST00000519141 ITGB4P16144 1822 aa15.7■□□□□ 0.1
SPIDR-209ENST00000519141 A0A0G2JS52 829 aa15.7■□□□□ 0.1
SPIDR-209ENST00000519141 EIF2S2P20042 333 aaKnown RBP15.7■□□□□ 0.1
SPIDR-209ENST00000519141 MYT1Q01538 1121 aa15.7■□□□□ 0.1
SPIDR-209ENST00000519141 CCDC125Q86Z20 511 aa15.7■□□□□ 0.1
SPIDR-209ENST00000519141 CHMP4BQ9H444 224 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms