RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 SHANK3Q9BYB0 1731 aa19.23■□□□□ 0.67
TRAPPC9-205ENST00000518839 HOXB7P09629 217 aa19.23■□□□□ 0.67
TRAPPC9-205ENST00000518839 ZCRB1Q8TBF4 217 aaKnown RBP19.23■□□□□ 0.67
TRAPPC9-205ENST00000518839 BTBD11A6QL63 1104 aa19.22■□□□□ 0.67
TRAPPC9-205ENST00000518839 TRIM27P14373 513 aa19.22■□□□□ 0.67
TRAPPC9-205ENST00000518839 PANK1Q8TE04 598 aa19.22■□□□□ 0.67
TRAPPC9-205ENST00000518839 API5Q9BZZ5 524 aaKnown RBP19.22■□□□□ 0.67
TRAPPC9-205ENST00000518839 KDM6AO15550 1401 aaPredicted RBP19.22■□□□□ 0.67
TRAPPC9-205ENST00000518839 MVPQ14764 893 aaKnown RBP19.21■□□□□ 0.67
TRAPPC9-205ENST00000518839 CHMP4BQ9H444 224 aaKnown RBP19.21■□□□□ 0.67
TRAPPC9-205ENST00000518839 COG6Q9Y2V7 657 aa19.21■□□□□ 0.67
TRAPPC9-205ENST00000518839 CYP27B1O15528 508 aa19.2■□□□□ 0.66
TRAPPC9-205ENST00000518839 KRT24Q2M2I5 525 aa19.2■□□□□ 0.66
TRAPPC9-205ENST00000518839 CCDC30Q5VVM6 783 aa19.2■□□□□ 0.66
TRAPPC9-205ENST00000518839 ADAMTS2O95450 1211 aa19.19■□□□□ 0.66
TRAPPC9-205ENST00000518839 EIF4A1P60842 406 aaKnown RBP19.19■□□□□ 0.66
TRAPPC9-205ENST00000518839 STK31Q9BXU1 1019 aa19.19■□□□□ 0.66
TRAPPC9-205ENST00000518839 SLC52A2Q9HAB3 445 aa19.19■□□□□ 0.66
TRAPPC9-205ENST00000518839 DDX19BQ9UMR2 479 aa19.19■□□□□ 0.66
TRAPPC9-205ENST00000518839 PTPRCP08575 1304 aa19.19■□□□□ 0.66
TRAPPC9-205ENST00000518839 DISP2A7MBM2 1401 aa19.18■□□□□ 0.66
TRAPPC9-205ENST00000518839 RLBP1P12271 317 aa19.18■□□□□ 0.66
TRAPPC9-205ENST00000518839 CLUAP1Q96AJ1 413 aa19.18■□□□□ 0.66
TRAPPC9-205ENST00000518839 CDCA7Q9BWT1 371 aaPredicted RBP19.18■□□□□ 0.66
TRAPPC9-205ENST00000518839 SPATA31A6Q5VVP1 1343 aa19.18■□□□□ 0.66
TRAPPC9-205ENST00000518839 SLIT2O94813 1529 aa19.17■□□□□ 0.66
TRAPPC9-205ENST00000518839 NUTM2BA6NNL0 878 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC9-205ENST00000518839 NUTM2EB1AL46 878 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC9-205ENST00000518839 NKX1-1Q15270 411 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC9-205ENST00000518839 NUTM2AQ8IVF1 878 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC9-205ENST00000518839 THRAP3Q9Y2W1 955 aaKnown RBP19.17■□□□□ 0.66
TRAPPC9-205ENST00000518839 ERVV-2B6SEH9 535 aa19.15■□□□□ 0.66
TRAPPC9-205ENST00000518839 TNNQ9UQP3 1299 aa19.15■□□□□ 0.66
TRAPPC9-205ENST00000518839 ABCC4O15439 1325 aa19.15■□□□□ 0.66
TRAPPC9-205ENST00000518839 TCERG1O14776 1098 aaKnown RBP19.14■□□□□ 0.65
TRAPPC9-205ENST00000518839 CABP4P57796 275 aa19.14■□□□□ 0.65
TRAPPC9-205ENST00000518839 ITPRIPQ8IWB1 547 aa19.14■□□□□ 0.65
TRAPPC9-205ENST00000518839 HEG1Q9ULI3 1381 aa19.14■□□□□ 0.65
TRAPPC9-205ENST00000518839 SLC4A2P04920 1241 aa19.13■□□□□ 0.65
TRAPPC9-205ENST00000518839 HDGFL1Q5TGJ6 251 aa19.13■□□□□ 0.65
TRAPPC9-205ENST00000518839 TMEM57Q8N5G2 664 aa19.13■□□□□ 0.65
TRAPPC9-205ENST00000518839 USP35Q9P2H5 1018 aa19.13■□□□□ 0.65
TRAPPC9-205ENST00000518839 LRP6O75581 1613 aa19.13■□□□□ 0.65
TRAPPC9-205ENST00000518839 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.12■□□□□ 0.65
TRAPPC9-205ENST00000518839 SPATA31A1Q5TZJ5 1347 aa19.12■□□□□ 0.65
TRAPPC9-205ENST00000518839 ZNF790Q6PG37 636 aa19.12■□□□□ 0.65
TRAPPC9-205ENST00000518839 CENPQQ7L2Z9 268 aaPredicted RBP19.12■□□□□ 0.65
TRAPPC9-205ENST00000518839 TTC5Q8N0Z6 440 aa19.11■□□□□ 0.65
TRAPPC9-205ENST00000518839 NFATC2IPQ8NCF5 419 aa19.11■□□□□ 0.65
TRAPPC9-205ENST00000518839 N4BP2Q86UW6 1770 aaPredicted RBP19.11■□□□□ 0.65
TRAPPC9-205ENST00000518839 PAPPAQ13219 1627 aa19.11■□□□□ 0.65
TRAPPC9-205ENST00000518839 TNS2Q63HR2 1409 aa19.1■□□□□ 0.65
TRAPPC9-205ENST00000518839 KCNQ3O43525 872 aa19.1■□□□□ 0.65
TRAPPC9-205ENST00000518839 DDX54Q8TDD1 881 aaKnown RBP19.1■□□□□ 0.65
TRAPPC9-205ENST00000518839 LAMB4A4D0S4 1761 aa19.09■□□□□ 0.65
TRAPPC9-205ENST00000518839 UBR2Q8IWV8 1755 aa19.09■□□□□ 0.65
TRAPPC9-205ENST00000518839 SPATA31A5Q5VU36 1347 aa19.09■□□□□ 0.65
TRAPPC9-205ENST00000518839 SPATA31A7Q8IWB4 1347 aa19.09■□□□□ 0.65
TRAPPC9-205ENST00000518839 EXOC5O00471 708 aa19.09■□□□□ 0.65
TRAPPC9-205ENST00000518839 GIGYF1O75420 1035 aaPredicted RBP19.09■□□□□ 0.65
TRAPPC9-205ENST00000518839 RGS12O14924 1447 aa19.08■□□□□ 0.65
TRAPPC9-205ENST00000518839 TOGARAM1Q9Y4F4 1720 aa19.08■□□□□ 0.65
TRAPPC9-205ENST00000518839 KDM2BQ8NHM5 1336 aa19.08■□□□□ 0.65
TRAPPC9-205ENST00000518839 INTS3Q68E01 1043 aaKnown RBP19.08■□□□□ 0.64
TRAPPC9-205ENST00000518839 BARGINQ6ZT62 677 aa19.08■□□□□ 0.64
TRAPPC9-205ENST00000518839 UNC5CLQ8IV45 518 aa19.08■□□□□ 0.64
TRAPPC9-205ENST00000518839 FLIIQ13045 1269 aa19.07■□□□□ 0.64
TRAPPC9-205ENST00000518839 NGLY1Q96IV0 654 aa19.07■□□□□ 0.64
TRAPPC9-205ENST00000518839 FMNL2Q96PY5 1086 aa19.07■□□□□ 0.64
TRAPPC9-205ENST00000518839 PXDNLA1KZ92 1463 aa19.07■□□□□ 0.64
TRAPPC9-205ENST00000518839 C5P01031 1676 aa19.07■□□□□ 0.64
TRAPPC9-205ENST00000518839 ITGB4P16144 1822 aa19.07■□□□□ 0.64
TRAPPC9-205ENST00000518839 EIF2S2P20042 333 aaKnown RBP19.06■□□□□ 0.64
TRAPPC9-205ENST00000518839 DBF4Q9UBU7 674 aaPredicted RBP19.06■□□□□ 0.64
TRAPPC9-205ENST00000518839 CCT4P50991 539 aaKnown RBP19.05■□□□□ 0.64
TRAPPC9-205ENST00000518839 VPS72Q15906 364 aa19.05■□□□□ 0.64
TRAPPC9-205ENST00000518839 FNBP4Q8N3X1 1017 aaPredicted RBP19.05■□□□□ 0.64
TRAPPC9-205ENST00000518839 RWDD1Q9H446 243 aaPredicted RBP19.05■□□□□ 0.64
TRAPPC9-205ENST00000518839 ZBTB40Q9NUA8 1239 aa19.05■□□□□ 0.64
TRAPPC9-205ENST00000518839 SNRPA1P09661 255 aaKnown RBP19.04■□□□□ 0.64
TRAPPC9-205ENST00000518839 SLC39A6Q13433 755 aa19.04■□□□□ 0.64
TRAPPC9-205ENST00000518839 NECTIN2Q92692 538 aa19.04■□□□□ 0.64
TRAPPC9-205ENST00000518839 C8orf37Q96NL8 207 aa19.04■□□□□ 0.64
TRAPPC9-205ENST00000518839 CCDC9Q9Y3X0 531 aaKnown RBP19.04■□□□□ 0.64
TRAPPC9-205ENST00000518839 ZBTB7BO15156 539 aaPredicted RBP19.03■□□□□ 0.64
TRAPPC9-205ENST00000518839 HSPA1LP34931 641 aa19.03■□□□□ 0.64
TRAPPC9-205ENST00000518839 FKBP5Q13451 457 aaPredicted RBP19.03■□□□□ 0.64
TRAPPC9-205ENST00000518839 G2E3Q7L622 706 aa19.03■□□□□ 0.64
TRAPPC9-205ENST00000518839 TMOD3Q9NYL9 352 aa19.03■□□□□ 0.64
TRAPPC9-205ENST00000518839 BCL9LQ86UU0 1499 aa19.03■□□□□ 0.64
TRAPPC9-205ENST00000518839 DDB1Q16531 1140 aa19.02■□□□□ 0.64
TRAPPC9-205ENST00000518839 ZNF496Q96IT1 587 aaPredicted RBP19.02■□□□□ 0.64
TRAPPC9-205ENST00000518839 HYPKQ9NX55 129 aa19.02■□□□□ 0.64
TRAPPC9-205ENST00000518839 CHPF2Q9P2E5 772 aa19.02■□□□□ 0.64
TRAPPC9-205ENST00000518839 DDX21Q9NR30 783 aaKnown RBP eCLIP19.01■□□□□ 0.63
TRAPPC9-205ENST00000518839 PCDHB15Q9Y5E8 787 aa19.01■□□□□ 0.63
TRAPPC9-205ENST00000518839 GLI3P10071 1580 aa19.01■□□□□ 0.63
TRAPPC9-205ENST00000518839 ERBB4Q15303 1308 aa19■□□□□ 0.63
TRAPPC9-205ENST00000518839 KCPQ6ZWJ8 1503 aa19■□□□□ 0.63
TRAPPC9-205ENST00000518839 DOT1LQ8TEK3 1739 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms