RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 BLOC1S3Q6QNY0 202 aa9.7□□□□□ -0.86
CPS1-210ENST00000518043 CARD11Q9BXL7 1154 aa9.7□□□□□ -0.86
CPS1-210ENST00000518043 LMTK3Q96Q04 1460 aa9.7□□□□□ -0.86
CPS1-210ENST00000518043 C11orf95C9JLR9 678 aaPredicted RBP9.69□□□□□ -0.86
CPS1-210ENST00000518043 LILRB3O75022 631 aa9.69□□□□□ -0.86
CPS1-210ENST00000518043 QRICH2Q9H0J4 1663 aa9.69□□□□□ -0.86
CPS1-210ENST00000518043 HCSTQ9UBK5 93 aa9.69□□□□□ -0.86
CPS1-210ENST00000518043 XRN1Q8IZH2 1706 aaKnown RBP9.68□□□□□ -0.86
CPS1-210ENST00000518043 DIP2AQ14689 1571 aa9.68□□□□□ -0.86
CPS1-210ENST00000518043 DLC1Q96QB1 1528 aa9.68□□□□□ -0.86
CPS1-210ENST00000518043 METP08581 1390 aa9.68□□□□□ -0.86
CPS1-210ENST00000518043 NR1I2O75469 434 aa9.68□□□□□ -0.86
CPS1-210ENST00000518043 EIF4G2P78344 907 aaKnown RBP eCLIP9.68□□□□□ -0.86
CPS1-210ENST00000518043 MMRN1Q13201 1228 aa9.68□□□□□ -0.86
CPS1-210ENST00000518043 PPP2R2DQ66LE6 453 aa9.68□□□□□ -0.86
CPS1-210ENST00000518043 SCUBE3Q8IX30 993 aa9.68□□□□□ -0.86
CPS1-210ENST00000518043 CABLES1Q8TDN4 633 aa9.68□□□□□ -0.86
CPS1-210ENST00000518043 TESK2Q96S53 571 aa9.68□□□□□ -0.86
CPS1-210ENST00000518043 ZBTB3Q9H5J0 574 aa9.68□□□□□ -0.86
CPS1-210ENST00000518043 CPS1P31327 1500 aa9.67□□□□□ -0.86
CPS1-210ENST00000518043 TECPR2O15040 1411 aa9.67□□□□□ -0.86
CPS1-210ENST00000518043 YTHDC2Q9H6S0 1430 aaKnown RBP9.67□□□□□ -0.86
CPS1-210ENST00000518043 NUTM2BA6NNL0 878 aaPredicted RBP9.67□□□□□ -0.86
CPS1-210ENST00000518043 NUTM2EB1AL46 878 aaPredicted RBP9.67□□□□□ -0.86
CPS1-210ENST00000518043 C6orf229H3BNL8 230 aa9.67□□□□□ -0.86
CPS1-210ENST00000518043 COPS2P61201 443 aa9.67□□□□□ -0.86
CPS1-210ENST00000518043 MTMR2Q13614 643 aa9.67□□□□□ -0.86
CPS1-210ENST00000518043 Q3C1V9 767 aa9.67□□□□□ -0.86
CPS1-210ENST00000518043 NUTM2AQ8IVF1 878 aaPredicted RBP9.67□□□□□ -0.86
CPS1-210ENST00000518043 PTPRUQ92729 1446 aa9.66□□□□□ -0.86
CPS1-210ENST00000518043 STRCQ7RTU9 1775 aa9.66□□□□□ -0.86
CPS1-210ENST00000518043 WASHC2AQ641Q2 1341 aa9.66□□□□□ -0.86
CPS1-210ENST00000518043 ST20-MTHFSA0A0A6YYL1 179 aa9.66□□□□□ -0.86
CPS1-210ENST00000518043 RFC5P40937 340 aa9.66□□□□□ -0.86
CPS1-210ENST00000518043 TMEM132EQ6IEE7 984 aa9.66□□□□□ -0.86
CPS1-210ENST00000518043 THEMISQ8N1K5 641 aaPredicted RBP9.66□□□□□ -0.86
CPS1-210ENST00000518043 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.66□□□□□ -0.86
CPS1-210ENST00000518043 SYMPKQ92797 1274 aaKnown RBP9.66□□□□□ -0.86
CPS1-210ENST00000518043 MTRQ99707 1265 aa9.66□□□□□ -0.86
CPS1-210ENST00000518043 MYOM1P52179 1685 aa9.66□□□□□ -0.86
CPS1-210ENST00000518043 LRPPRCP42704 1394 aaKnown RBP9.65□□□□□ -0.86
CPS1-210ENST00000518043 CCDC7Q96M83 1385 aa9.65□□□□□ -0.86
CPS1-210ENST00000518043 DISP3Q9P2K9 1392 aa9.65□□□□□ -0.86
CPS1-210ENST00000518043 RTL5Q5HYW3 569 aaPredicted RBP9.65□□□□□ -0.86
CPS1-210ENST00000518043 RNF19BQ6ZMZ0 732 aa9.65□□□□□ -0.86
CPS1-210ENST00000518043 TXNDC2Q86VQ3 553 aa9.65□□□□□ -0.86
CPS1-210ENST00000518043 SALL2Q9Y467 1007 aaPredicted RBP9.65□□□□□ -0.86
CPS1-210ENST00000518043 TULP4Q9NRJ4 1543 aa9.65□□□□□ -0.86
CPS1-210ENST00000518043 SBNO2Q9Y2G9 1366 aa9.64□□□□□ -0.87
CPS1-210ENST00000518043 KIF7Q2M1P5 1343 aa9.64□□□□□ -0.87
CPS1-210ENST00000518043 CHD2O14647 1828 aaKnown RBP9.64□□□□□ -0.87
CPS1-210ENST00000518043 SPDYE5A6NIY4 337 aa9.64□□□□□ -0.87
CPS1-210ENST00000518043 TJAP1Q5JTD0 557 aa9.64□□□□□ -0.87
CPS1-210ENST00000518043 THAP11Q96EK4 314 aa9.64□□□□□ -0.87
CPS1-210ENST00000518043 NWD1Q149M9 1564 aa9.63□□□□□ -0.87
CPS1-210ENST00000518043 BRICD5Q6PL45 260 aa9.63□□□□□ -0.87
CPS1-210ENST00000518043 NPHP4O75161 1426 aaPredicted RBP9.63□□□□□ -0.87
CPS1-210ENST00000518043 ABCC11Q96J66 1382 aa9.63□□□□□ -0.87
CPS1-210ENST00000518043 PLEKHH1Q9ULM0 1364 aa9.63□□□□□ -0.87
CPS1-210ENST00000518043 ZPR1O75312 459 aa9.62□□□□□ -0.87
CPS1-210ENST00000518043 FMNL1O95466 1100 aaPredicted RBP9.62□□□□□ -0.87
CPS1-210ENST00000518043 RETREG3Q86VR2 466 aa9.62□□□□□ -0.87
CPS1-210ENST00000518043 IL21Q9HBE4 155 aa9.62□□□□□ -0.87
CPS1-210ENST00000518043 STRCP1A6NGW2 1772 aa9.62□□□□□ -0.87
CPS1-210ENST00000518043 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.62□□□□□ -0.87
CPS1-210ENST00000518043 EIF3AQ14152 1382 aaKnown RBP9.62□□□□□ -0.87
CPS1-210ENST00000518043 CFAP99D6REC4 459 aa9.61□□□□□ -0.87
CPS1-210ENST00000518043 TRAK1Q9UPV9 953 aa9.61□□□□□ -0.87
CPS1-210ENST00000518043 ADGRB2O60241 1585 aa9.61□□□□□ -0.87
CPS1-210ENST00000518043 ROBO2Q9HCK4 1378 aa9.61□□□□□ -0.87
CPS1-210ENST00000518043 PTCH1Q13635 1447 aa9.6□□□□□ -0.87
CPS1-210ENST00000518043 FAM135BQ49AJ0 1406 aa9.6□□□□□ -0.87
CPS1-210ENST00000518043 TLL1O43897 1013 aa9.6□□□□□ -0.87
CPS1-210ENST00000518043 TMEM259Q4ZIN3 620 aa9.6□□□□□ -0.87
CPS1-210ENST00000518043 PRR7Q8TB68 274 aa9.6□□□□□ -0.87
CPS1-210ENST00000518043 ZNF516Q92618 1163 aa9.6□□□□□ -0.87
CPS1-210ENST00000518043 SLC26A8Q96RN1 970 aa9.6□□□□□ -0.87
CPS1-210ENST00000518043 USB1Q9BQ65 265 aaKnown RBP9.6□□□□□ -0.87
CPS1-210ENST00000518043 TBX22Q9Y458 520 aa9.6□□□□□ -0.87
CPS1-210ENST00000518043 EID1Q9Y6B2 187 aa9.6□□□□□ -0.87
CPS1-210ENST00000518043 CENPJQ9HC77 1338 aaPredicted RBP9.59□□□□□ -0.87
CPS1-210ENST00000518043 HSPA2P54652 639 aa9.59□□□□□ -0.87
CPS1-210ENST00000518043 ANKLE2Q86XL3 938 aa9.59□□□□□ -0.87
CPS1-210ENST00000518043 SPSB2Q99619 263 aa9.59□□□□□ -0.87
CPS1-210ENST00000518043 PIK3R4Q99570 1358 aa9.59□□□□□ -0.87
CPS1-210ENST00000518043 AP1G2O75843 785 aa9.58□□□□□ -0.88
CPS1-210ENST00000518043 TSC1Q92574 1164 aa9.58□□□□□ -0.88
CPS1-210ENST00000518043 STK26Q9P289 416 aa9.58□□□□□ -0.88
CPS1-210ENST00000518043 NALCNQ8IZF0 1738 aa9.57□□□□□ -0.88
CPS1-210ENST00000518043 BANK1Q8NDB2 785 aa9.57□□□□□ -0.88
CPS1-210ENST00000518043 HELBQ8NG08 1087 aaPredicted RBP9.57□□□□□ -0.88
CPS1-210ENST00000518043 SIRT1Q96EB6 747 aa9.57□□□□□ -0.88
CPS1-210ENST00000518043 TOPAZ1Q8N9V7 1692 aa9.56□□□□□ -0.88
CPS1-210ENST00000518043 ITGBL1O95965 494 aaPredicted RBP9.56□□□□□ -0.88
CPS1-210ENST00000518043 ADH1BP00325 375 aa9.56□□□□□ -0.88
CPS1-210ENST00000518043 MSS51Q4VC12 460 aa9.56□□□□□ -0.88
CPS1-210ENST00000518043 FAM160A2Q8N612 972 aaPredicted RBP9.56□□□□□ -0.88
CPS1-210ENST00000518043 PRAM1Q96QH2 718 aa9.56□□□□□ -0.88
CPS1-210ENST00000518043 USP32Q8NFA0 1604 aa9.56□□□□□ -0.88
CPS1-210ENST00000518043 XIRP1Q702N8 1843 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms