RNA–Protein interactions for RNA: ENST00000518038.1

VPS37A-203, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37A, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-203ENST00000518038 HSP90AB1P08238 724 aaKnown RBP24.35■■□□□ 1.49
VPS37A-203ENST00000518038 HMOX1P09601 288 aa24.35■■□□□ 1.49
VPS37A-203ENST00000518038 MAP3K5Q99683 1374 aa24.34■■□□□ 1.49
VPS37A-203ENST00000518038 CABP4P57796 275 aa24.34■■□□□ 1.49
VPS37A-203ENST00000518038 NLGN2Q8NFZ4 835 aa24.34■■□□□ 1.49
VPS37A-203ENST00000518038 C4BP0C0L5 1744 aa24.33■■□□□ 1.49
VPS37A-203ENST00000518038 FLAD1Q8NFF5 587 aa24.33■■□□□ 1.49
VPS37A-203ENST00000518038 COL24A1Q17RW2 1714 aa24.32■■□□□ 1.48
VPS37A-203ENST00000518038 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.32■■□□□ 1.48
VPS37A-203ENST00000518038 C1orf141Q5JVX7 400 aa24.32■■□□□ 1.48
VPS37A-203ENST00000518038 RBM42Q9BTD8 480 aaKnown RBP24.32■■□□□ 1.48
VPS37A-203ENST00000518038 TAF1LQ8IZX4 1826 aa24.32■■□□□ 1.48
VPS37A-203ENST00000518038 HMGB2P26583 209 aaKnown RBP24.31■■□□□ 1.48
VPS37A-203ENST00000518038 NFATC2IPQ8NCF5 419 aa24.31■■□□□ 1.48
VPS37A-203ENST00000518038 DIAPH1O60610 1272 aaKnown RBP24.3■■□□□ 1.48
VPS37A-203ENST00000518038 GNPATO15228 680 aa24.29■■□□□ 1.48
VPS37A-203ENST00000518038 LGR6Q9HBX8 967 aa24.29■■□□□ 1.48
VPS37A-203ENST00000518038 NPC1L1Q9UHC9 1359 aa24.29■■□□□ 1.48
VPS37A-203ENST00000518038 PTCD1O75127 700 aaKnown RBP24.26■■□□□ 1.47
VPS37A-203ENST00000518038 SSFA2P28290 1259 aa24.26■■□□□ 1.47
VPS37A-203ENST00000518038 GPR162Q16538 588 aa24.26■■□□□ 1.47
VPS37A-203ENST00000518038 MTHFSDQ2M296 383 aaKnown RBP24.26■■□□□ 1.47
VPS37A-203ENST00000518038 AKAP4Q5JQC9 854 aa24.25■■□□□ 1.47
VPS37A-203ENST00000518038 PELP1Q8IZL8 1130 aaKnown RBP24.25■■□□□ 1.47
VPS37A-203ENST00000518038 UBR3Q6ZT12 1888 aa24.22■■□□□ 1.47
VPS37A-203ENST00000518038 COL3A1P02461 1466 aaPredicted RBP24.22■■□□□ 1.47
VPS37A-203ENST00000518038 U2SURPO15042 1029 aaKnown RBP24.21■■□□□ 1.47
VPS37A-203ENST00000518038 RNMTO43148 476 aaKnown RBP24.21■■□□□ 1.47
VPS37A-203ENST00000518038 TRAPPC3LQ5T215 181 aa24.2■■□□□ 1.46
VPS37A-203ENST00000518038 SLC52A2Q9HAB3 445 aa24.2■■□□□ 1.46
VPS37A-203ENST00000518038 RTCBQ9Y3I0 505 aaKnown RBP24.2■■□□□ 1.46
VPS37A-203ENST00000518038 YBX3P16989 372 aaKnown RBP eCLIP24.19■■□□□ 1.46
VPS37A-203ENST00000518038 RC3H1Q5TC82 1133 aaKnown RBP24.19■■□□□ 1.46
VPS37A-203ENST00000518038 ARHGEF1Q92888 912 aaKnown RBP24.19■■□□□ 1.46
VPS37A-203ENST00000518038 SLC39A6Q13433 755 aa24.18■■□□□ 1.46
VPS37A-203ENST00000518038 CD2APQ9Y5K6 639 aa24.18■■□□□ 1.46
VPS37A-203ENST00000518038 CNTNAP4Q9C0A0 1308 aa24.17■■□□□ 1.46
VPS37A-203ENST00000518038 RPS6KA4O75676 772 aa24.17■■□□□ 1.46
VPS37A-203ENST00000518038 PPP2R1AP30153 589 aa24.15■■□□□ 1.46
VPS37A-203ENST00000518038 CRKLP46109 303 aaKnown RBP24.15■■□□□ 1.46
VPS37A-203ENST00000518038 MMP10P09238 476 aa24.14■■□□□ 1.45
VPS37A-203ENST00000518038 ZNF784Q8NCA9 323 aaPredicted RBP24.14■■□□□ 1.45
VPS37A-203ENST00000518038 INTS5Q6P9B9 1019 aaKnown RBP24.13■■□□□ 1.45
VPS37A-203ENST00000518038 DNAJC10Q8IXB1 793 aa24.13■■□□□ 1.45
VPS37A-203ENST00000518038 PHACTR3Q96KR7 559 aa24.13■■□□□ 1.45
VPS37A-203ENST00000518038 WWC3Q9ULE0 1092 aa24.13■■□□□ 1.45
VPS37A-203ENST00000518038 UTRNP46939 3433 aa24.13■■□□□ 1.45
VPS37A-203ENST00000518038 ZNF831Q5JPB2 1677 aa24.12■■□□□ 1.45
VPS37A-203ENST00000518038 SCN11AQ9UI33 1791 aa24.12■■□□□ 1.45
VPS37A-203ENST00000518038 IL17REQ8NFR9 667 aa24.12■■□□□ 1.45
VPS37A-203ENST00000518038 GYS1P13807 737 aa24.11■■□□□ 1.45
VPS37A-203ENST00000518038 RFC4P35249 363 aa24.11■■□□□ 1.45
VPS37A-203ENST00000518038 ADRA2BP18089 450 aa24.1■■□□□ 1.45
VPS37A-203ENST00000518038 CFAP53Q96M91 514 aa24.1■■□□□ 1.45
VPS37A-203ENST00000518038 SRP68Q9UHB9 627 aaKnown RBP24.1■■□□□ 1.45
VPS37A-203ENST00000518038 COL5A3P25940 1745 aaPredicted RBP24.1■■□□□ 1.45
VPS37A-203ENST00000518038 PRKAR2BP31323 418 aa24.09■■□□□ 1.45
VPS37A-203ENST00000518038 NLGN1Q8N2Q7 840 aa24.09■■□□□ 1.45
VPS37A-203ENST00000518038 RSPH6AQ9H0K4 717 aa24.09■■□□□ 1.45
VPS37A-203ENST00000518038 MRC1P22897 1456 aa24.08■■□□□ 1.45
VPS37A-203ENST00000518038 MYH14Q7Z406 1995 aaKnown RBP24.08■■□□□ 1.45
VPS37A-203ENST00000518038 GNAT3A8MTJ3 354 aa24.07■■□□□ 1.44
VPS37A-203ENST00000518038 GRIN3BO60391 1043 aa24.07■■□□□ 1.44
VPS37A-203ENST00000518038 CYP19A1P11511 503 aaPredicted RBP24.07■■□□□ 1.44
VPS37A-203ENST00000518038 GAS2L2Q8NHY3 880 aa24.06■■□□□ 1.44
VPS37A-203ENST00000518038 TJP1Q07157 1748 aa24.06■■□□□ 1.44
VPS37A-203ENST00000518038 U2AF1L5P0DN76 240 aaPredicted RBP24.05■■□□□ 1.44
VPS37A-203ENST00000518038 U2AF1Q01081 240 aaKnown RBP eCLIP24.05■■□□□ 1.44
VPS37A-203ENST00000518038 CCDC87Q9NVE4 849 aa24.05■■□□□ 1.44
VPS37A-203ENST00000518038 ADAMTS7Q9UKP4 1686 aa24.05■■□□□ 1.44
VPS37A-203ENST00000518038 KCPQ6ZWJ8 1503 aa24.05■■□□□ 1.44
VPS37A-203ENST00000518038 FKBP8Q14318 412 aa24.04■■□□□ 1.44
VPS37A-203ENST00000518038 NUDCQ9Y266 331 aa24.04■■□□□ 1.44
VPS37A-203ENST00000518038 USP42Q9H9J4 1324 aaKnown RBP24.02■■□□□ 1.44
VPS37A-203ENST00000518038 A0A0G2JLW4 131 aa24.01■■□□□ 1.43
VPS37A-203ENST00000518038 TEFQ10587 303 aa24.01■■□□□ 1.43
VPS37A-203ENST00000518038 ZNF496Q96IT1 587 aaPredicted RBP24.01■■□□□ 1.43
VPS37A-203ENST00000518038 ZBTB1Q9Y2K1 713 aa24.01■■□□□ 1.43
VPS37A-203ENST00000518038 SOS1Q07889 1333 aaPredicted RBP24.01■■□□□ 1.43
VPS37A-203ENST00000518038 CICQ96RK0 1608 aaPredicted RBP24■■□□□ 1.43
VPS37A-203ENST00000518038 KCNQ3O43525 872 aa24■■□□□ 1.43
VPS37A-203ENST00000518038 DDR1Q08345 913 aa24■■□□□ 1.43
VPS37A-203ENST00000518038 PARP3Q9Y6F1 533 aa24■■□□□ 1.43
VPS37A-203ENST00000518038 USPL1Q5W0Q7 1092 aa23.99■■□□□ 1.43
VPS37A-203ENST00000518038 ZNF790Q6PG37 636 aa23.99■■□□□ 1.43
VPS37A-203ENST00000518038 TTC5Q8N0Z6 440 aa23.99■■□□□ 1.43
VPS37A-203ENST00000518038 VSIG10Q8N0Z9 540 aa23.99■■□□□ 1.43
VPS37A-203ENST00000518038 CHD4Q14839 1912 aa23.99■■□□□ 1.43
VPS37A-203ENST00000518038 GOLGB1Q14789 3259 aaKnown RBP23.99■■□□□ 1.43
VPS37A-203ENST00000518038 FCHSD2O94868 740 aa23.98■■□□□ 1.43
VPS37A-203ENST00000518038 PXDNLA1KZ92 1463 aa23.97■■□□□ 1.43
VPS37A-203ENST00000518038 C4AP0C0L4 1744 aa23.97■■□□□ 1.43
VPS37A-203ENST00000518038 DPEP1P16444 411 aa23.97■■□□□ 1.43
VPS37A-203ENST00000518038 CANXP27824 592 aaKnown RBP23.97■■□□□ 1.43
VPS37A-203ENST00000518038 TM4SF1P30408 202 aa23.97■■□□□ 1.43
VPS37A-203ENST00000518038 CEMIPQ8WUJ3 1361 aa23.97■■□□□ 1.43
VPS37A-203ENST00000518038 TGFB2P61812 414 aa23.96■■□□□ 1.43
VPS37A-203ENST00000518038 MCM10Q7L590 875 aa23.96■■□□□ 1.43
VPS37A-203ENST00000518038 VIRMAQ69YN4 1812 aaKnown RBP23.96■■□□□ 1.43
VPS37A-203ENST00000518038 C10orf71Q711Q0 1435 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms