RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 SPG7Q9UQ90 795 aa11.49□□□□□ -0.57
SCARNA20.3-201ENST00000516913 GNPATO15228 680 aa11.48□□□□□ -0.57
SCARNA20.3-201ENST00000516913 SSFA2P28290 1259 aa11.48□□□□□ -0.57
SCARNA20.3-201ENST00000516913 AK7Q96M32 723 aa11.48□□□□□ -0.57
SCARNA20.3-201ENST00000516913 GRIN3BO60391 1043 aa11.47□□□□□ -0.57
SCARNA20.3-201ENST00000516913 MMP10P09238 476 aa11.47□□□□□ -0.57
SCARNA20.3-201ENST00000516913 KCNA3P22001 575 aa11.47□□□□□ -0.57
SCARNA20.3-201ENST00000516913 ARHGEF1Q92888 912 aaKnown RBP11.47□□□□□ -0.57
SCARNA20.3-201ENST00000516913 TIMELESSQ9UNS1 1208 aa11.47□□□□□ -0.57
SCARNA20.3-201ENST00000516913 KIAA1551Q9HCM1 1747 aa11.46□□□□□ -0.57
SCARNA20.3-201ENST00000516913 PXDNLA1KZ92 1463 aa11.46□□□□□ -0.57
SCARNA20.3-201ENST00000516913 A0A0G2JLW4 131 aa11.46□□□□□ -0.57
SCARNA20.3-201ENST00000516913 GYS1P13807 737 aa11.46□□□□□ -0.57
SCARNA20.3-201ENST00000516913 IL13P35225 146 aa11.46□□□□□ -0.57
SCARNA20.3-201ENST00000516913 AMER1Q5JTC6 1135 aaPredicted RBP11.46□□□□□ -0.57
SCARNA20.3-201ENST00000516913 FLAD1Q8NFF5 587 aa11.46□□□□□ -0.57
SCARNA20.3-201ENST00000516913 SRP68Q9UHB9 627 aaKnown RBP11.46□□□□□ -0.57
SCARNA20.3-201ENST00000516913 MYH14Q7Z406 1995 aaKnown RBP11.46□□□□□ -0.58
SCARNA20.3-201ENST00000516913 GIGYF1O75420 1035 aaPredicted RBP11.45□□□□□ -0.58
SCARNA20.3-201ENST00000516913 DDR1Q08345 913 aa11.45□□□□□ -0.58
SCARNA20.3-201ENST00000516913 ZNF526Q8TF50 670 aaPredicted RBP11.45□□□□□ -0.58
SCARNA20.3-201ENST00000516913 LGR6Q9HBX8 967 aa11.45□□□□□ -0.58
SCARNA20.3-201ENST00000516913 ERVV-2B6SEH9 535 aa11.44□□□□□ -0.58
SCARNA20.3-201ENST00000516913 KIF3CO14782 793 aa11.44□□□□□ -0.58
SCARNA20.3-201ENST00000516913 ZNF530Q6P9A1 599 aaPredicted RBP11.44□□□□□ -0.58
SCARNA20.3-201ENST00000516913 INTS5Q6P9B9 1019 aaKnown RBP11.44□□□□□ -0.58
SCARNA20.3-201ENST00000516913 NFATC2IPQ8NCF5 419 aa11.44□□□□□ -0.58
SCARNA20.3-201ENST00000516913 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
SCARNA20.3-201ENST00000516913 PER1O15534 1290 aaPredicted RBP11.43□□□□□ -0.58
SCARNA20.3-201ENST00000516913 PTCD1O75127 700 aaKnown RBP11.43□□□□□ -0.58
SCARNA20.3-201ENST00000516913 DPEP1P16444 411 aa11.43□□□□□ -0.58
SCARNA20.3-201ENST00000516913 FKBP8Q14318 412 aa11.43□□□□□ -0.58
SCARNA20.3-201ENST00000516913 RC3H1Q5TC82 1133 aaKnown RBP11.43□□□□□ -0.58
SCARNA20.3-201ENST00000516913 RPS6KA4O75676 772 aa11.42□□□□□ -0.58
SCARNA20.3-201ENST00000516913 PRELPP51888 382 aa11.42□□□□□ -0.58
SCARNA20.3-201ENST00000516913 EIF4G2P78344 907 aaKnown RBP eCLIP11.42□□□□□ -0.58
SCARNA20.3-201ENST00000516913 TRAPPC3LQ5T215 181 aa11.42□□□□□ -0.58
SCARNA20.3-201ENST00000516913 SULT6B1Q6IMI4 303 aa11.42□□□□□ -0.58
SCARNA20.3-201ENST00000516913 DCAF5Q96JK2 942 aa11.42□□□□□ -0.58
SCARNA20.3-201ENST00000516913 C10orf71Q711Q0 1435 aa11.42□□□□□ -0.58
SCARNA20.3-201ENST00000516913 CNTNAP4Q9C0A0 1308 aa11.41□□□□□ -0.58
SCARNA20.3-201ENST00000516913 SLC39A6Q13433 755 aa11.41□□□□□ -0.58
SCARNA20.3-201ENST00000516913 PLEKHO1Q53GL0 409 aaPredicted RBP11.41□□□□□ -0.58
SCARNA20.3-201ENST00000516913 CICQ96RK0 1608 aaPredicted RBP11.41□□□□□ -0.58
SCARNA20.3-201ENST00000516913 KIF7Q2M1P5 1343 aa11.4□□□□□ -0.58
SCARNA20.3-201ENST00000516913 CLSPNQ9HAW4 1339 aa11.4□□□□□ -0.58
SCARNA20.3-201ENST00000516913 ADAMTS7Q9UKP4 1686 aa11.4□□□□□ -0.58
SCARNA20.3-201ENST00000516913 CRKLP46109 303 aaKnown RBP11.4□□□□□ -0.58
SCARNA20.3-201ENST00000516913 MORC1Q86VD1 984 aa11.4□□□□□ -0.58
SCARNA20.3-201ENST00000516913 DNAJC10Q8IXB1 793 aa11.4□□□□□ -0.58
SCARNA20.3-201ENST00000516913 BCL2L12Q9HB09 334 aa11.4□□□□□ -0.58
SCARNA20.3-201ENST00000516913 RTCBQ9Y3I0 505 aaKnown RBP11.4□□□□□ -0.58
SCARNA20.3-201ENST00000516913 COL5A3P25940 1745 aaPredicted RBP11.39□□□□□ -0.59
SCARNA20.3-201ENST00000516913 TM4SF1P30408 202 aa11.39□□□□□ -0.59
SCARNA20.3-201ENST00000516913 MTHFSP49914 203 aa11.39□□□□□ -0.59
SCARNA20.3-201ENST00000516913 CABP4P57796 275 aa11.39□□□□□ -0.59
SCARNA20.3-201ENST00000516913 HMOX1P09601 288 aa11.38□□□□□ -0.59
SCARNA20.3-201ENST00000516913 CHRNA5P30532 468 aa11.38□□□□□ -0.59
SCARNA20.3-201ENST00000516913 MTHFSDQ2M296 383 aaKnown RBP11.38□□□□□ -0.59
SCARNA20.3-201ENST00000516913 NLGN1Q8N2Q7 840 aa11.38□□□□□ -0.59
SCARNA20.3-201ENST00000516913 GPBP1L1Q9HC44 474 aaPredicted RBP11.38□□□□□ -0.59
SCARNA20.3-201ENST00000516913 NMRK2Q9NPI5 230 aa11.38□□□□□ -0.59
SCARNA20.3-201ENST00000516913 N4BP2Q86UW6 1770 aaPredicted RBP11.38□□□□□ -0.59
SCARNA20.3-201ENST00000516913 PLEKHG2Q9H7P9 1386 aa11.38□□□□□ -0.59
SCARNA20.3-201ENST00000516913 USP42Q9H9J4 1324 aaKnown RBP11.37□□□□□ -0.59
SCARNA20.3-201ENST00000516913 BCS1LQ9Y276 419 aa11.37□□□□□ -0.59
SCARNA20.3-201ENST00000516913 TJP1Q07157 1748 aa11.37□□□□□ -0.59
SCARNA20.3-201ENST00000516913 KIF13BQ9NQT8 1826 aa11.37□□□□□ -0.59
SCARNA20.3-201ENST00000516913 POLRMTO00411 1230 aaKnown RBP11.36□□□□□ -0.59
SCARNA20.3-201ENST00000516913 RNMTO43148 476 aaKnown RBP11.36□□□□□ -0.59
SCARNA20.3-201ENST00000516913 CYP19A1P11511 503 aaPredicted RBP11.36□□□□□ -0.59
SCARNA20.3-201ENST00000516913 HSPA6P17066 643 aa11.36□□□□□ -0.59
SCARNA20.3-201ENST00000516913 TGFB2P61812 414 aa11.36□□□□□ -0.59
SCARNA20.3-201ENST00000516913 AMOTQ4VCS5 1084 aa11.36□□□□□ -0.59
SCARNA20.3-201ENST00000516913 DNAJC5GQ8N7S2 189 aa11.36□□□□□ -0.59
SCARNA20.3-201ENST00000516913 SLC52A2Q9HAB3 445 aa11.36□□□□□ -0.59
SCARNA20.3-201ENST00000516913 ZNF831Q5JPB2 1677 aa11.36□□□□□ -0.59
SCARNA20.3-201ENST00000516913 SOS1Q07889 1333 aaPredicted RBP11.35□□□□□ -0.59
SCARNA20.3-201ENST00000516913 KCPQ6ZWJ8 1503 aa11.35□□□□□ -0.59
SCARNA20.3-201ENST00000516913 ADRA2BP18089 450 aa11.35□□□□□ -0.59
SCARNA20.3-201ENST00000516913 RFC4P35249 363 aa11.35□□□□□ -0.59
SCARNA20.3-201ENST00000516913 HTRA3P83110 453 aa11.35□□□□□ -0.59
SCARNA20.3-201ENST00000516913 ARHGAP27Q6ZUM4 889 aa11.35□□□□□ -0.59
SCARNA20.3-201ENST00000516913 ZBTB1Q9Y2K1 713 aa11.35□□□□□ -0.59
SCARNA20.3-201ENST00000516913 C4AP0C0L4 1744 aa11.35□□□□□ -0.59
SCARNA20.3-201ENST00000516913 COL3A1P02461 1466 aaPredicted RBP11.34□□□□□ -0.59
SCARNA20.3-201ENST00000516913 KCNQ3O43525 872 aa11.34□□□□□ -0.59
SCARNA20.3-201ENST00000516913 HSP90AB1P08238 724 aaKnown RBP11.34□□□□□ -0.59
SCARNA20.3-201ENST00000516913 NFIXQ14938 502 aa11.34□□□□□ -0.59
SCARNA20.3-201ENST00000516913 USPL1Q5W0Q7 1092 aa11.34□□□□□ -0.59
SCARNA20.3-201ENST00000516913 IL17REQ8NFR9 667 aa11.34□□□□□ -0.59
SCARNA20.3-201ENST00000516913 CARMIL3Q8ND23 1372 aa11.33□□□□□ -0.6
SCARNA20.3-201ENST00000516913 FCHSD2O94868 740 aa11.33□□□□□ -0.6
SCARNA20.3-201ENST00000516913 AKAP4Q5JQC9 854 aa11.33□□□□□ -0.6
SCARNA20.3-201ENST00000516913 CC2D1BQ5T0F9 858 aaKnown RBP11.33□□□□□ -0.6
SCARNA20.3-201ENST00000516913 C9orf131Q5VYM1 1079 aa11.33□□□□□ -0.6
SCARNA20.3-201ENST00000516913 KNSTRNQ9Y448 316 aa11.33□□□□□ -0.6
SCARNA20.3-201ENST00000516913 MRC1P22897 1456 aa11.32□□□□□ -0.6
SCARNA20.3-201ENST00000516913 C1orf141Q5JVX7 400 aa11.32□□□□□ -0.6
SCARNA20.3-201ENST00000516913 PHACTR3Q96KR7 559 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms