RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 TATP17735 454 aaPredicted RBP19.48■□□□□ 0.71
THUMPD3-210ENST00000515662 VIRMAQ69YN4 1812 aaKnown RBP19.48■□□□□ 0.71
THUMPD3-210ENST00000515662 MEGF6O75095 1541 aa19.48■□□□□ 0.71
THUMPD3-210ENST00000515662 PLEKHG2Q9H7P9 1386 aa19.47■□□□□ 0.71
THUMPD3-210ENST00000515662 NECTIN2Q92692 538 aa19.47■□□□□ 0.71
THUMPD3-210ENST00000515662 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.47■□□□□ 0.712e-6■■■■□ 22.9
THUMPD3-210ENST00000515662 ABCA3Q99758 1704 aa19.46■□□□□ 0.71
THUMPD3-210ENST00000515662 KCNQ3O43525 872 aa19.46■□□□□ 0.71
THUMPD3-210ENST00000515662 HOXB7P09629 217 aa19.46■□□□□ 0.71
THUMPD3-210ENST00000515662 ANP32AP39687 249 aaKnown RBP19.46■□□□□ 0.71
THUMPD3-210ENST00000515662 PRDM11Q9NQV5 511 aa19.46■□□□□ 0.71
THUMPD3-210ENST00000515662 SIRT2Q8IXJ6 389 aa19.46■□□□□ 0.71
THUMPD3-210ENST00000515662 SPG7Q9UQ90 795 aa19.46■□□□□ 0.71
THUMPD3-210ENST00000515662 SIPA1L3O60292 1781 aaPredicted RBP19.45■□□□□ 0.7
THUMPD3-210ENST00000515662 FLIIQ13045 1269 aa19.45■□□□□ 0.7
THUMPD3-210ENST00000515662 HDGFL1Q5TGJ6 251 aa19.45■□□□□ 0.7
THUMPD3-210ENST00000515662 F6X3S4 739 aa19.44■□□□□ 0.7
THUMPD3-210ENST00000515662 CACNA1FO60840 1977 aa19.44■□□□□ 0.7
THUMPD3-210ENST00000515662 PHKG2P15735 406 aa19.43■□□□□ 0.7
THUMPD3-210ENST00000515662 CCT4P50991 539 aaKnown RBP19.43■□□□□ 0.7
THUMPD3-210ENST00000515662 NUCB1Q02818 461 aa19.43■□□□□ 0.7
THUMPD3-210ENST00000515662 KDM6AO15550 1401 aaPredicted RBP19.42■□□□□ 0.7
THUMPD3-210ENST00000515662 WDR17Q8IZU2 1322 aa19.42■□□□□ 0.7
THUMPD3-210ENST00000515662 FKBP5Q13451 457 aaPredicted RBP19.42■□□□□ 0.7
THUMPD3-210ENST00000515662 SLC4A10Q6U841 1118 aa19.42■□□□□ 0.7
THUMPD3-210ENST00000515662 GCC1Q96CN9 775 aa19.42■□□□□ 0.7
THUMPD3-210ENST00000515662 PKD1L3Q7Z443 1732 aa19.42■□□□□ 0.7
THUMPD3-210ENST00000515662 NPM2Q86SE8 214 aaKnown RBP19.41■□□□□ 0.7
THUMPD3-210ENST00000515662 CHMP4AQ9BY43 222 aa19.41■□□□□ 0.7
THUMPD3-210ENST00000515662 COL5A2P05997 1499 aaPredicted RBP19.41■□□□□ 0.7
THUMPD3-210ENST00000515662 SCN11AQ9UI33 1791 aa19.41■□□□□ 0.7
THUMPD3-210ENST00000515662 MEIS3Q99687 375 aa19.41■□□□□ 0.7
THUMPD3-210ENST00000515662 ATP10DQ9P241 1426 aa19.41■□□□□ 0.7
THUMPD3-210ENST00000515662 IFNL2Q8IZJ0 200 aa19.4■□□□□ 0.7
THUMPD3-210ENST00000515662 HEG1Q9ULI3 1381 aa19.4■□□□□ 0.7
THUMPD3-210ENST00000515662 EIF2S2P20042 333 aaKnown RBP19.4■□□□□ 0.7
THUMPD3-210ENST00000515662 CHD1LQ86WJ1 897 aa19.39■□□□□ 0.69
THUMPD3-210ENST00000515662 ANKRD44Q8N8A2 993 aa19.39■□□□□ 0.69
THUMPD3-210ENST00000515662 CYP27B1O15528 508 aa19.38■□□□□ 0.69
THUMPD3-210ENST00000515662 IPO9Q96P70 1041 aaKnown RBP19.38■□□□□ 0.69
THUMPD3-210ENST00000515662 PHAXQ9H814 394 aaKnown RBP19.38■□□□□ 0.69
THUMPD3-210ENST00000515662 SLC52A2Q9HAB3 445 aa19.38■□□□□ 0.69
THUMPD3-210ENST00000515662 GIGYF1O75420 1035 aaPredicted RBP19.37■□□□□ 0.69
THUMPD3-210ENST00000515662 TOM1L2Q6ZVM7 507 aa19.37■□□□□ 0.69
THUMPD3-210ENST00000515662 RPAP2Q8IXW5 612 aaPredicted RBP19.37■□□□□ 0.69
THUMPD3-210ENST00000515662 BCL11AQ9H165 835 aa19.37■□□□□ 0.69
THUMPD3-210ENST00000515662 CHPF2Q9P2E5 772 aa19.37■□□□□ 0.69
THUMPD3-210ENST00000515662 PXDNLA1KZ92 1463 aa19.37■□□□□ 0.69
THUMPD3-210ENST00000515662 CEP85Q6P2H3 762 aa19.37■□□□□ 0.69
THUMPD3-210ENST00000515662 NOP58Q9Y2X3 529 aaKnown RBP19.37■□□□□ 0.69
THUMPD3-210ENST00000515662 N4BP2Q86UW6 1770 aaPredicted RBP19.37■□□□□ 0.69
THUMPD3-210ENST00000515662 DCAF5Q96JK2 942 aa19.36■□□□□ 0.69
THUMPD3-210ENST00000515662 LNPKQ9C0E8 428 aa19.36■□□□□ 0.69
THUMPD3-210ENST00000515662 ANKRD45Q5TZF3 282 aa19.36■□□□□ 0.69
THUMPD3-210ENST00000515662 PARP4Q9UKK3 1724 aaKnown RBP19.36■□□□□ 0.69
THUMPD3-210ENST00000515662 MRC1P22897 1456 aa19.36■□□□□ 0.69
THUMPD3-210ENST00000515662 ROBO1Q9Y6N7 1651 aa19.35■□□□□ 0.69
THUMPD3-210ENST00000515662 LTBP4Q8N2S1 1624 aa19.35■□□□□ 0.69
THUMPD3-210ENST00000515662 NFATC2IPQ8NCF5 419 aa19.35■□□□□ 0.69
THUMPD3-210ENST00000515662 CARD10Q9BWT7 1032 aa19.35■□□□□ 0.69
THUMPD3-210ENST00000515662 HSP90AB1P08238 724 aaKnown RBP19.34■□□□□ 0.69
THUMPD3-210ENST00000515662 DCTPP1Q9H773 170 aa19.34■□□□□ 0.69
THUMPD3-210ENST00000515662 ZNF790Q6PG37 636 aa19.34■□□□□ 0.69
THUMPD3-210ENST00000515662 NBR1Q14596 966 aa19.33■□□□□ 0.69
THUMPD3-210ENST00000515662 DBF4Q9UBU7 674 aaPredicted RBP19.33■□□□□ 0.69
THUMPD3-210ENST00000515662 AHDC1Q5TGY3 1603 aaPredicted RBP19.33■□□□□ 0.68
THUMPD3-210ENST00000515662 PRAMEF22A3QJZ6 481 aa19.32■□□□□ 0.68
THUMPD3-210ENST00000515662 GNAI2P04899 355 aa19.32■□□□□ 0.68
THUMPD3-210ENST00000515662 GNAI3P08754 354 aa19.32■□□□□ 0.68
THUMPD3-210ENST00000515662 SLC39A6Q13433 755 aa19.32■□□□□ 0.68
THUMPD3-210ENST00000515662 LARP1Q6PKG0 1096 aaKnown RBP19.32■□□□□ 0.68
THUMPD3-210ENST00000515662 STRN4Q9NRL3 753 aa19.32■□□□□ 0.68
THUMPD3-210ENST00000515662 ANXA1P04083 346 aa19.31■□□□□ 0.68
THUMPD3-210ENST00000515662 EVA1CP58658 441 aa19.31■□□□□ 0.68
THUMPD3-210ENST00000515662 ZCRB1Q8TBF4 217 aaKnown RBP19.31■□□□□ 0.68
THUMPD3-210ENST00000515662 SEC24BO95487 1268 aa19.3■□□□□ 0.68
THUMPD3-210ENST00000515662 PCDH11XQ9BZA7 1347 aa19.3■□□□□ 0.68
THUMPD3-210ENST00000515662 PCDH11YQ9BZA8 1340 aa19.3■□□□□ 0.68
THUMPD3-210ENST00000515662 IL2RBP14784 551 aa19.29■□□□□ 0.68
THUMPD3-210ENST00000515662 PROSER3Q2NL68 480 aa19.29■□□□□ 0.68
THUMPD3-210ENST00000515662 PI4KAP2A4QPH2 592 aa19.28■□□□□ 0.68
THUMPD3-210ENST00000515662 HMMRO75330 724 aa19.28■□□□□ 0.68
THUMPD3-210ENST00000515662 PI4KAP1Q8N8J0 262 aa19.28■□□□□ 0.68
THUMPD3-210ENST00000515662 DNAAF4Q8WXU2 420 aa19.28■□□□□ 0.68
THUMPD3-210ENST00000515662 USP44Q9H0E7 712 aa19.28■□□□□ 0.68
THUMPD3-210ENST00000515662 ADCY9O60503 1353 aa19.28■□□□□ 0.68
THUMPD3-210ENST00000515662 C5P01031 1676 aa19.28■□□□□ 0.68
THUMPD3-210ENST00000515662 COL22A1Q8NFW1 1626 aaPredicted RBP19.28■□□□□ 0.68
THUMPD3-210ENST00000515662 CABP4P57796 275 aa19.28■□□□□ 0.68
THUMPD3-210ENST00000515662 SRCIN1Q9C0H9 1055 aa19.28■□□□□ 0.68
THUMPD3-210ENST00000515662 HYPKQ9NX55 129 aa19.27■□□□□ 0.68
THUMPD3-210ENST00000515662 BEND3Q5T5X7 828 aa19.27■□□□□ 0.67
THUMPD3-210ENST00000515662 ZNF496Q96IT1 587 aaPredicted RBP19.27■□□□□ 0.67
THUMPD3-210ENST00000515662 DDX21Q9NR30 783 aaKnown RBP eCLIP19.26■□□□□ 0.67
THUMPD3-210ENST00000515662 ZBTB47Q9UFB7 747 aaPredicted RBP19.26■□□□□ 0.67
THUMPD3-210ENST00000515662 PDIA6Q15084 440 aa19.26■□□□□ 0.67
THUMPD3-210ENST00000515662 NKX1-1Q15270 411 aaPredicted RBP19.26■□□□□ 0.67
THUMPD3-210ENST00000515662 TTC5Q8N0Z6 440 aa19.26■□□□□ 0.67
THUMPD3-210ENST00000515662 BTG4Q9NY30 223 aa19.26■□□□□ 0.67
THUMPD3-210ENST00000515662 SHANK3Q9BYB0 1731 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms