RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 FHDC1Q9C0D6 1143 aaPredicted RBP9.2□□□□□ -0.94
LINC01088-211ENST00000515597 XAGE2Q96GT9 111 aa9.19□□□□□ -0.94
LINC01088-211ENST00000515597 MX2P20592 715 aa9.18□□□□□ -0.94
LINC01088-211ENST00000515597 TMEM214Q6NUQ4 689 aaKnown RBP9.18□□□□□ -0.94
LINC01088-211ENST00000515597 ETNK1Q9HBU6 452 aa9.18□□□□□ -0.94
LINC01088-211ENST00000515597 C4orf17Q53FE4 359 aa9.17□□□□□ -0.94
LINC01088-211ENST00000515597 ACDQ96AP0 544 aa9.17□□□□□ -0.94
LINC01088-211ENST00000515597 ESCO1Q5FWF5 840 aa9.16□□□□□ -0.94
LINC01088-211ENST00000515597 GNASQ5JWF2 1037 aa9.16□□□□□ -0.94
LINC01088-211ENST00000515597 SCARF2Q96GP6 870 aaPredicted RBP9.16□□□□□ -0.94
LINC01088-211ENST00000515597 RUBCNLQ9H714 662 aa9.16□□□□□ -0.94
LINC01088-211ENST00000515597 A0A1B0GTH6 734 aa9.15□□□□□ -0.94
LINC01088-211ENST00000515597 BCRP11274 1271 aa9.15□□□□□ -0.94
LINC01088-211ENST00000515597 GTF2E1P29083 439 aaPredicted RBP9.15□□□□□ -0.94
LINC01088-211ENST00000515597 USP4Q13107 963 aa9.15□□□□□ -0.94
LINC01088-211ENST00000515597 TLR1Q15399 786 aa9.15□□□□□ -0.94
LINC01088-211ENST00000515597 ENAMQ9NRM1 1142 aa9.15□□□□□ -0.94
LINC01088-211ENST00000515597 MCM6Q14566 821 aa9.14□□□□□ -0.95
LINC01088-211ENST00000515597 CHIC2Q9UKJ5 165 aa9.14□□□□□ -0.95
LINC01088-211ENST00000515597 CNTNAP5Q8WYK1 1306 aa9.13□□□□□ -0.95
LINC01088-211ENST00000515597 KANK3Q6NY19 840 aa9.13□□□□□ -0.95
LINC01088-211ENST00000515597 NEDD1Q8NHV4 660 aa9.13□□□□□ -0.95
LINC01088-211ENST00000515597 DNMT3AQ9Y6K1 912 aaPredicted RBP9.13□□□□□ -0.95
LINC01088-211ENST00000515597 MSX1P28360 303 aa9.12□□□□□ -0.95
LINC01088-211ENST00000515597 SCNN1DP51172 638 aa9.12□□□□□ -0.95
LINC01088-211ENST00000515597 GPAT2Q6NUI2 795 aa9.12□□□□□ -0.95
LINC01088-211ENST00000515597 PLPP7Q8NBV4 271 aa9.12□□□□□ -0.95
LINC01088-211ENST00000515597 RHBDD1Q8TEB9 315 aa9.12□□□□□ -0.95
LINC01088-211ENST00000515597 NSFL1CQ9UNZ2 370 aaKnown RBP9.12□□□□□ -0.95
LINC01088-211ENST00000515597 CSB-PGBD3P0DP91 1061 aa9.11□□□□□ -0.95
LINC01088-211ENST00000515597 PLA2G4AP47712 749 aa9.11□□□□□ -0.95
LINC01088-211ENST00000515597 UBAP2LQ14157 1087 aaKnown RBP9.11□□□□□ -0.95
LINC01088-211ENST00000515597 PPARGC1BQ86YN6 1023 aaKnown RBP9.11□□□□□ -0.95
LINC01088-211ENST00000515597 PGBD3Q8N328 593 aa9.11□□□□□ -0.95
LINC01088-211ENST00000515597 GDF10P55107 478 aa9.1□□□□□ -0.95
LINC01088-211ENST00000515597 WASHC4Q2M389 1173 aa9.1□□□□□ -0.95
LINC01088-211ENST00000515597 SIRT1Q96EB6 747 aa9.1□□□□□ -0.95
LINC01088-211ENST00000515597 CFHR5Q9BXR6 569 aa9.1□□□□□ -0.95
LINC01088-211ENST00000515597 OXCT2Q9BYC2 517 aaPredicted RBP9.1□□□□□ -0.95
LINC01088-211ENST00000515597 PIK3CDO00329 1044 aa9.09□□□□□ -0.95
LINC01088-211ENST00000515597 SEMA3FQ13275 785 aa9.09□□□□□ -0.95
LINC01088-211ENST00000515597 SUZ12Q15022 739 aaKnown RBP9.09□□□□□ -0.95
LINC01088-211ENST00000515597 ABHD17AQ96GS6 310 aa9.09□□□□□ -0.95
LINC01088-211ENST00000515597 OIP5O43482 229 aa9.08□□□□□ -0.96
LINC01088-211ENST00000515597 INHAP05111 366 aa9.08□□□□□ -0.96
LINC01088-211ENST00000515597 MAP2K3P46734 347 aa9.08□□□□□ -0.96
LINC01088-211ENST00000515597 PODNQ7Z5L7 613 aa9.08□□□□□ -0.96
LINC01088-211ENST00000515597 SERTAD1Q9UHV2 236 aa9.08□□□□□ -0.96
LINC01088-211ENST00000515597 PHF24Q9UPV7 400 aa9.08□□□□□ -0.96
LINC01088-211ENST00000515597 LBRQ14739 615 aaKnown RBP9.07□□□□□ -0.96
LINC01088-211ENST00000515597 MAP7D1Q3KQU3 841 aa9.07□□□□□ -0.96
LINC01088-211ENST00000515597 EFHC2Q5JST6 749 aa9.07□□□□□ -0.96
LINC01088-211ENST00000515597 KLRG1Q96E93 195 aa9.07□□□□□ -0.96
LINC01088-211ENST00000515597 COG6Q9Y2V7 657 aa9.07□□□□□ -0.96
LINC01088-211ENST00000515597 PHF20L1A8MW92 1017 aa9.06□□□□□ -0.96
LINC01088-211ENST00000515597 SHISA8B8ZZ34 492 aa9.06□□□□□ -0.96
LINC01088-211ENST00000515597 C1orf229Q6ZS94 237 aaPredicted RBP9.06□□□□□ -0.96
LINC01088-211ENST00000515597 TBC1D9Q6ZT07 1266 aa9.06□□□□□ -0.96
LINC01088-211ENST00000515597 ATXN7L1Q9ULK2 861 aaPredicted RBP9.06□□□□□ -0.96
LINC01088-211ENST00000515597 BNIP3LO60238 219 aa9.05□□□□□ -0.96
LINC01088-211ENST00000515597 ATP4AP20648 1035 aa9.05□□□□□ -0.96
LINC01088-211ENST00000515597 DCAF5Q96JK2 942 aa9.05□□□□□ -0.96
LINC01088-211ENST00000515597 CRISPLD1Q9H336 500 aa9.05□□□□□ -0.96
LINC01088-211ENST00000515597 LOC100996750A0A140TA64 210 aa9.04□□□□□ -0.96
LINC01088-211ENST00000515597 TMEM229AB2RXF0 380 aa9.04□□□□□ -0.96
LINC01088-211ENST00000515597 C2CD2LO14523 706 aa9.04□□□□□ -0.96
LINC01088-211ENST00000515597 FGFR3P22607 806 aa9.04□□□□□ -0.96
LINC01088-211ENST00000515597 SOX11P35716 441 aa9.04□□□□□ -0.96
LINC01088-211ENST00000515597 SMTNP53814 917 aa9.04□□□□□ -0.96
LINC01088-211ENST00000515597 SNRPNP63162 240 aaKnown RBP9.04□□□□□ -0.96
LINC01088-211ENST00000515597 BEND7Q8N7W2 519 aaPredicted RBP9.04□□□□□ -0.96
LINC01088-211ENST00000515597 AIDAQ96BJ3 306 aa9.04□□□□□ -0.96
LINC01088-211ENST00000515597 KRTAP4-6Q9BYQ5 205 aa9.04□□□□□ -0.96
LINC01088-211ENST00000515597 LRRC4BQ9NT99 713 aa9.04□□□□□ -0.96
LINC01088-211ENST00000515597 NDFIP2Q9NV92 336 aa9.04□□□□□ -0.96
LINC01088-211ENST00000515597 USP3Q9Y6I4 520 aa9.04□□□□□ -0.96
LINC01088-211ENST00000515597 BMP4P12644 408 aa9.03□□□□□ -0.96
LINC01088-211ENST00000515597 CTBSQ01459 385 aa9.03□□□□□ -0.96
LINC01088-211ENST00000515597 GALNT6Q8NCL4 622 aa9.03□□□□□ -0.96
LINC01088-211ENST00000515597 POM121Q96HA1 1249 aa9.03□□□□□ -0.96
LINC01088-211ENST00000515597 NIFKQ9BYG3 293 aaKnown RBP9.03□□□□□ -0.96
LINC01088-211ENST00000515597 DNAAF2Q9NVR5 837 aaKnown RBP9.03□□□□□ -0.96
LINC01088-211ENST00000515597 FOXK2Q01167 660 aa9.02□□□□□ -0.97
LINC01088-211ENST00000515597 PLA2G4EQ3MJ16 856 aa9.02□□□□□ -0.97
LINC01088-211ENST00000515597 IGHA1P01876 353 aa9.01□□□□□ -0.97
LINC01088-211ENST00000515597 SKIP12755 728 aa9.01□□□□□ -0.97
LINC01088-211ENST00000515597 ZNF295-AS1Q8N0V1 137 aa9.01□□□□□ -0.97
LINC01088-211ENST00000515597 EDARADDQ8WWZ3 215 aa9.01□□□□□ -0.97
LINC01088-211ENST00000515597 GGA1Q9UJY5 639 aa9.01□□□□□ -0.97
LINC01088-211ENST00000515597 GDF2Q9UK05 429 aaPredicted RBP9.01□□□□□ -0.97
LINC01088-211ENST00000515597 PCDHGA11Q9Y5H2 935 aa9.01□□□□□ -0.97
LINC01088-211ENST00000515597 ITGB2P05107 769 aa9□□□□□ -0.97
LINC01088-211ENST00000515597 GOLGA6L1Q8N7Z2 621 aa9□□□□□ -0.97
LINC01088-211ENST00000515597 ZCCHC2Q9C0B9 1178 aaKnown RBP9□□□□□ -0.97
LINC01088-211ENST00000515597 RRAGCQ9HB90 399 aa9□□□□□ -0.97
LINC01088-211ENST00000515597 IQSEC3Q9UPP2 1182 aaPredicted RBP9□□□□□ -0.97
LINC01088-211ENST00000515597 DCDC2BA2VCK2 349 aa8.99□□□□□ -0.97
LINC01088-211ENST00000515597 A6NJY4 79 aa8.99□□□□□ -0.97
LINC01088-211ENST00000515597 EML3Q32P44 896 aa8.99□□□□□ -0.97
LINC01088-211ENST00000515597 SLCO4C1Q6ZQN7 724 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms