RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 HSP90AB2PQ58FF8 381 aa16.73■□□□□ 0.27
CSF1R-208ENST00000515239 KDM2BQ8NHM5 1336 aa16.72■□□□□ 0.27
CSF1R-208ENST00000515239 C10orf71Q711Q0 1435 aa16.72■□□□□ 0.27
CSF1R-208ENST00000515239 KCPQ6ZWJ8 1503 aa16.72■□□□□ 0.27
CSF1R-208ENST00000515239 ATP6V1AP38606 617 aa16.72■□□□□ 0.27
CSF1R-208ENST00000515239 TMF1P82094 1093 aa16.72■□□□□ 0.27
CSF1R-208ENST00000515239 ASAP1Q9ULH1 1129 aa16.72■□□□□ 0.27
CSF1R-208ENST00000515239 CARD11Q9BXL7 1154 aa16.71■□□□□ 0.27
CSF1R-208ENST00000515239 PLEKHG2Q9H7P9 1386 aa16.71■□□□□ 0.27
CSF1R-208ENST00000515239 SMG6Q86US8 1419 aaKnown RBP16.7■□□□□ 0.26
CSF1R-208ENST00000515239 INSRP06213 1382 aa16.7■□□□□ 0.26
CSF1R-208ENST00000515239 FYB1O15117 783 aa16.7■□□□□ 0.26
CSF1R-208ENST00000515239 HSPA1AP0DMV8 641 aaKnown RBP16.7■□□□□ 0.26
CSF1R-208ENST00000515239 HSPA1BP0DMV9 641 aaKnown RBP16.7■□□□□ 0.26
CSF1R-208ENST00000515239 TRAPPC3LQ5T215 181 aa16.7■□□□□ 0.26
CSF1R-208ENST00000515239 SMC1BQ8NDV3 1235 aa16.7■□□□□ 0.26
CSF1R-208ENST00000515239 CCDC87Q9NVE4 849 aa16.7■□□□□ 0.26
CSF1R-208ENST00000515239 BRCA1P38398 1863 aaKnown RBP16.69■□□□□ 0.26
CSF1R-208ENST00000515239 NEUROD1Q13562 356 aa16.69■□□□□ 0.26
CSF1R-208ENST00000515239 DCAF5Q96JK2 942 aa16.69■□□□□ 0.26
CSF1R-208ENST00000515239 PIM2Q9P1W9 311 aa16.69■□□□□ 0.26
CSF1R-208ENST00000515239 GYS1P13807 737 aa16.68■□□□□ 0.26
CSF1R-208ENST00000515239 ARHGEF1Q92888 912 aaKnown RBP16.68■□□□□ 0.26
CSF1R-208ENST00000515239 GGNBP2Q9H3C7 697 aa16.68■□□□□ 0.26
CSF1R-208ENST00000515239 ATG3Q9NT62 314 aa16.68■□□□□ 0.26
CSF1R-208ENST00000515239 TMOD3Q9NYL9 352 aa16.68■□□□□ 0.26
CSF1R-208ENST00000515239 RNF181Q9P0P0 153 aa16.68■□□□□ 0.26
CSF1R-208ENST00000515239 RTCBQ9Y3I0 505 aaKnown RBP16.68■□□□□ 0.26
CSF1R-208ENST00000515239 ARFGEF1Q9Y6D6 1849 aa16.66■□□□□ 0.26
CSF1R-208ENST00000515239 DALRD3Q5D0E6 543 aaKnown RBP16.66■□□□□ 0.26
CSF1R-208ENST00000515239 SLC4A9Q96Q91 983 aa16.66■□□□□ 0.26
CSF1R-208ENST00000515239 RC3H1Q5TC82 1133 aaKnown RBP16.65■□□□□ 0.26
CSF1R-208ENST00000515239 SPG7Q9UQ90 795 aa16.65■□□□□ 0.26
CSF1R-208ENST00000515239 PARP3Q9Y6F1 533 aa16.65■□□□□ 0.26
CSF1R-208ENST00000515239 C4AP0C0L4 1744 aa16.65■□□□□ 0.26
CSF1R-208ENST00000515239 PKD1L3Q7Z443 1732 aa16.65■□□□□ 0.26
CSF1R-208ENST00000515239 SLC34A2O95436 690 aa16.64■□□□□ 0.25
CSF1R-208ENST00000515239 TESK2Q96S53 571 aa16.64■□□□□ 0.25
CSF1R-208ENST00000515239 FLT4P35916 1363 aa16.64■□□□□ 0.25
CSF1R-208ENST00000515239 RPS6KA4O75676 772 aa16.63■□□□□ 0.25
CSF1R-208ENST00000515239 ADRA2BP18089 450 aa16.63■□□□□ 0.25
CSF1R-208ENST00000515239 RFC4P35249 363 aa16.63■□□□□ 0.25
CSF1R-208ENST00000515239 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.63■□□□□ 0.25
CSF1R-208ENST00000515239 SBF1O95248 1867 aa16.63■□□□□ 0.25
CSF1R-208ENST00000515239 KIF24Q5T7B8 1368 aa16.63■□□□□ 0.25
CSF1R-208ENST00000515239 TNRC6CQ9HCJ0 1690 aaKnown RBP16.62■□□□□ 0.25
CSF1R-208ENST00000515239 KDRP35968 1356 aa16.62■□□□□ 0.25
CSF1R-208ENST00000515239 NCAPD2Q15021 1401 aa16.62■□□□□ 0.25
CSF1R-208ENST00000515239 VEGFAP15692 232 aaPredicted RBP16.61■□□□□ 0.25
CSF1R-208ENST00000515239 PHKG2P15735 406 aa16.61■□□□□ 0.25
CSF1R-208ENST00000515239 CHRNA5P30532 468 aa16.61■□□□□ 0.25
CSF1R-208ENST00000515239 IFNL2Q8IZJ0 200 aa16.6■□□□□ 0.25
CSF1R-208ENST00000515239 GLTPD2A6NH11 291 aa16.59■□□□□ 0.25
CSF1R-208ENST00000515239 EMILIN1Q9Y6C2 1016 aa16.59■□□□□ 0.25
CSF1R-208ENST00000515239 TONSLQ96HA7 1378 aa16.59■□□□□ 0.25
CSF1R-208ENST00000515239 ST20-MTHFSA0A0A6YYL1 179 aa16.58■□□□□ 0.24
CSF1R-208ENST00000515239 DDR1Q08345 913 aa16.58■□□□□ 0.24
CSF1R-208ENST00000515239 EYA1Q99502 592 aa16.58■□□□□ 0.24
CSF1R-208ENST00000515239 RBM42Q9BTD8 480 aaKnown RBP16.58■□□□□ 0.24
CSF1R-208ENST00000515239 CNTNAP4Q9C0A0 1308 aa16.58■□□□□ 0.24
CSF1R-208ENST00000515239 ZC3H4Q9UPT8 1303 aaKnown RBP16.58■□□□□ 0.24
CSF1R-208ENST00000515239 KDM6AO15550 1401 aaPredicted RBP16.57■□□□□ 0.24
CSF1R-208ENST00000515239 FKBP8Q14318 412 aa16.57■□□□□ 0.24
CSF1R-208ENST00000515239 POTECB2RU33 542 aa16.56■□□□□ 0.24
CSF1R-208ENST00000515239 RASSF7Q02833 373 aa16.56■□□□□ 0.24
CSF1R-208ENST00000515239 SRP68Q9UHB9 627 aaKnown RBP16.56■□□□□ 0.24
CSF1R-208ENST00000515239 MYH14Q7Z406 1995 aaKnown RBP16.56■□□□□ 0.24
CSF1R-208ENST00000515239 ZNF831Q5JPB2 1677 aa16.56■□□□□ 0.24
CSF1R-208ENST00000515239 LMNB1P20700 586 aa16.55■□□□□ 0.24
CSF1R-208ENST00000515239 ERVV-2B6SEH9 535 aa16.54■□□□□ 0.24
CSF1R-208ENST00000515239 SLC24A1O60721 1099 aa16.54■□□□□ 0.24
CSF1R-208ENST00000515239 TM4SF1P30408 202 aa16.54■□□□□ 0.24
CSF1R-208ENST00000515239 COL5A3P25940 1745 aaPredicted RBP16.53■□□□□ 0.24
CSF1R-208ENST00000515239 WASHC2AQ641Q2 1341 aa16.53■□□□□ 0.24
CSF1R-208ENST00000515239 USP42Q9H9J4 1324 aaKnown RBP16.53■□□□□ 0.24
CSF1R-208ENST00000515239 FOXN1O15353 648 aa16.53■□□□□ 0.24
CSF1R-208ENST00000515239 PPM1GO15355 546 aaPredicted RBP16.53■□□□□ 0.24
CSF1R-208ENST00000515239 POLRMTO00411 1230 aaKnown RBP16.52■□□□□ 0.24
CSF1R-208ENST00000515239 CRKLP46109 303 aaKnown RBP16.51■□□□□ 0.23
CSF1R-208ENST00000515239 PRDM10Q9NQV6 1147 aa16.51■□□□□ 0.23
CSF1R-208ENST00000515239 CREBZFQ9NS37 354 aa16.51■□□□□ 0.23
CSF1R-208ENST00000515239 MKRN1Q9UHC7 482 aaKnown RBP16.51■□□□□ 0.23
CSF1R-208ENST00000515239 CARD14Q9BXL6 1004 aa16.5■□□□□ 0.23
CSF1R-208ENST00000515239 PTCD1O75127 700 aaKnown RBP16.48■□□□□ 0.23
CSF1R-208ENST00000515239 NFKBIEO00221 500 aa16.47■□□□□ 0.23
CSF1R-208ENST00000515239 CABP4P57796 275 aa16.47■□□□□ 0.23
CSF1R-208ENST00000515239 DPY19L2Q6NUT2 758 aa16.47■□□□□ 0.23
CSF1R-208ENST00000515239 INTS5Q6P9B9 1019 aaKnown RBP16.47■□□□□ 0.23
CSF1R-208ENST00000515239 KIF20BQ96Q89 1820 aa16.47■□□□□ 0.23
CSF1R-208ENST00000515239 CHADLQ6NUI6 762 aa16.46■□□□□ 0.23
CSF1R-208ENST00000515239 TTLL6Q8N841 843 aa16.46■□□□□ 0.23
CSF1R-208ENST00000515239 POLKQ9UBT6 870 aa16.46■□□□□ 0.23
CSF1R-208ENST00000515239 CCDC88AQ3V6T2 1871 aa16.46■□□□□ 0.22
CSF1R-208ENST00000515239 HSP90AB1P08238 724 aaKnown RBP16.45■□□□□ 0.22
CSF1R-208ENST00000515239 POTEIP0CG38 1075 aa16.45■□□□□ 0.22
CSF1R-208ENST00000515239 POTEJP0CG39 1038 aa16.45■□□□□ 0.22
CSF1R-208ENST00000515239 CTCFP49711 727 aaPredicted RBP16.45■□□□□ 0.22
CSF1R-208ENST00000515239 ADAMTS7Q9UKP4 1686 aa16.45■□□□□ 0.22
CSF1R-208ENST00000515239 CNTNAP1P78357 1384 aa16.44■□□□□ 0.22
CSF1R-208ENST00000515239 EIF4A2Q14240 407 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms