RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 PLPP7Q8NBV4 271 aa7.84□□□□□ -1.15
CLDND1-228ENST00000513873 CELA2BP08218 269 aaPredicted RBP7.83□□□□□ -1.16
CLDND1-228ENST00000513873 EML3Q32P44 896 aa7.83□□□□□ -1.16
CLDND1-228ENST00000513873 NEDD1Q8NHV4 660 aa7.83□□□□□ -1.16
CLDND1-228ENST00000513873 CCDC97Q96F63 343 aaPredicted RBP7.83□□□□□ -1.16
CLDND1-228ENST00000513873 CCDC85AQ96PX6 553 aaPredicted RBP7.83□□□□□ -1.16
CLDND1-228ENST00000513873 CNTNAP5Q8WYK1 1306 aa7.82□□□□□ -1.16
CLDND1-228ENST00000513873 SLC35F4A4IF30 521 aa7.82□□□□□ -1.16
CLDND1-228ENST00000513873 CBLBQ13191 982 aa7.82□□□□□ -1.16
CLDND1-228ENST00000513873 CYP2U1Q7Z449 544 aa7.82□□□□□ -1.16
CLDND1-228ENST00000513873 ADAMTS19Q8TE59 1207 aa7.82□□□□□ -1.16
CLDND1-228ENST00000513873 TIMELESSQ9UNS1 1208 aa7.82□□□□□ -1.16
CLDND1-228ENST00000513873 PIK3CDO00329 1044 aa7.81□□□□□ -1.16
CLDND1-228ENST00000513873 ATP9BO43861 1147 aa7.81□□□□□ -1.16
CLDND1-228ENST00000513873 BAG6P46379 1132 aa7.81□□□□□ -1.16
CLDND1-228ENST00000513873 ERVK-9P63128 1117 aa7.81□□□□□ -1.16
CLDND1-228ENST00000513873 Q6ZVU0 165 aa7.81□□□□□ -1.16
CLDND1-228ENST00000513873 TFIP11Q9UBB9 837 aaKnown RBP7.81□□□□□ -1.16
CLDND1-228ENST00000513873 NOD1Q9Y239 953 aa7.81□□□□□ -1.16
CLDND1-228ENST00000513873 USP17L5A8MUK1 530 aa7.8□□□□□ -1.16
CLDND1-228ENST00000513873 ATP5J2-PTCD1G3V325 749 aa7.8□□□□□ -1.16
CLDND1-228ENST00000513873 ADH1AP07327 375 aa7.8□□□□□ -1.16
CLDND1-228ENST00000513873 RELBQ01201 579 aa7.8□□□□□ -1.16
CLDND1-228ENST00000513873 CDCA7Q9BWT1 371 aaPredicted RBP7.8□□□□□ -1.16
CLDND1-228ENST00000513873 SERPINA10Q9UK55 444 aa7.8□□□□□ -1.16
CLDND1-228ENST00000513873 THOC2Q8NI27 1593 aaKnown RBP7.8□□□□□ -1.16
CLDND1-228ENST00000513873 ARID3CA6NKF2 412 aa7.79□□□□□ -1.16
CLDND1-228ENST00000513873 LILRA1O75019 489 aa7.79□□□□□ -1.16
CLDND1-228ENST00000513873 ADD1P35611 737 aaKnown RBP7.79□□□□□ -1.16
CLDND1-228ENST00000513873 TSGA10IPQ3SY00 556 aa7.79□□□□□ -1.16
CLDND1-228ENST00000513873 TBC1D9Q6ZT07 1266 aa7.79□□□□□ -1.16
CLDND1-228ENST00000513873 TRIM50Q86XT4 487 aa7.79□□□□□ -1.16
CLDND1-228ENST00000513873 PPP1R12CQ9BZL4 782 aa7.79□□□□□ -1.16
CLDND1-228ENST00000513873 CHIC2Q9UKJ5 165 aa7.79□□□□□ -1.16
CLDND1-228ENST00000513873 PALM3A6NDB9 673 aaPredicted RBP7.78□□□□□ -1.16
CLDND1-228ENST00000513873 BTBD11A6QL63 1104 aa7.78□□□□□ -1.16
CLDND1-228ENST00000513873 ITGB2P05107 769 aa7.78□□□□□ -1.16
CLDND1-228ENST00000513873 NCOA4Q13772 614 aa7.78□□□□□ -1.16
CLDND1-228ENST00000513873 DEPDC4Q8N2C3 294 aa7.78□□□□□ -1.16
CLDND1-228ENST00000513873 AGBL1Q96MI9 1066 aa7.78□□□□□ -1.16
CLDND1-228ENST00000513873 NLRP3Q96P20 1036 aa7.78□□□□□ -1.16
CLDND1-228ENST00000513873 RBM19Q9Y4C8 960 aaKnown RBP7.78□□□□□ -1.16
CLDND1-228ENST00000513873 NCAPD3P42695 1498 aa7.77□□□□□ -1.17
CLDND1-228ENST00000513873 USP17L3A6NCW0 530 aa7.77□□□□□ -1.17
CLDND1-228ENST00000513873 USP17L4A6NCW7 530 aa7.77□□□□□ -1.17
CLDND1-228ENST00000513873 GNRH1P01148 92 aa7.77□□□□□ -1.17
CLDND1-228ENST00000513873 FURINP09958 794 aa7.77□□□□□ -1.17
CLDND1-228ENST00000513873 LMOD1P29536 600 aaPredicted RBP7.77□□□□□ -1.17
CLDND1-228ENST00000513873 PTGIRP43119 386 aa7.77□□□□□ -1.17
CLDND1-228ENST00000513873 SCTRP47872 440 aa7.77□□□□□ -1.17
CLDND1-228ENST00000513873 ATP1A2P50993 1020 aa7.77□□□□□ -1.17
CLDND1-228ENST00000513873 PSME1Q06323 249 aa7.77□□□□□ -1.17
CLDND1-228ENST00000513873 ESCO1Q5FWF5 840 aa7.77□□□□□ -1.17
CLDND1-228ENST00000513873 LCE3BQ5TA77 95 aa7.77□□□□□ -1.17
CLDND1-228ENST00000513873 USP17L2Q6R6M4 530 aa7.77□□□□□ -1.17
CLDND1-228ENST00000513873 USP17L1Q7RTZ2 530 aa7.77□□□□□ -1.17
CLDND1-228ENST00000513873 PLEKHM2Q8IWE5 1019 aa7.77□□□□□ -1.17
CLDND1-228ENST00000513873 UCN2Q96RP3 112 aa7.77□□□□□ -1.17
CLDND1-228ENST00000513873 MEN1O00255 615 aa7.76□□□□□ -1.17
CLDND1-228ENST00000513873 ZNF395Q9H8N7 513 aaPredicted RBP7.76□□□□□ -1.17
CLDND1-228ENST00000513873 POLMQ9NP87 494 aaPredicted RBP7.76□□□□□ -1.17
CLDND1-228ENST00000513873 SUPT5HO00267 1087 aaKnown RBP7.75□□□□□ -1.17
CLDND1-228ENST00000513873 SPINT1O43278 529 aa7.75□□□□□ -1.17
CLDND1-228ENST00000513873 GTF2E1P29083 439 aaPredicted RBP7.75□□□□□ -1.17
CLDND1-228ENST00000513873 OSBPL3Q9H4L5 887 aa7.75□□□□□ -1.17
CLDND1-228ENST00000513873 MKRN1Q9UHC7 482 aaKnown RBP7.75□□□□□ -1.17
CLDND1-228ENST00000513873 MAFBQ9Y5Q3 323 aaPredicted RBP7.75□□□□□ -1.17
CLDND1-228ENST00000513873 NESP48681 1621 aa7.74□□□□□ -1.17
CLDND1-228ENST00000513873 A0A1W2PRU2 124 aa7.74□□□□□ -1.17
CLDND1-228ENST00000513873 BCRP11274 1271 aa7.74□□□□□ -1.17
CLDND1-228ENST00000513873 RFX1P22670 979 aa7.74□□□□□ -1.17
CLDND1-228ENST00000513873 GTF2IP78347 998 aa7.74□□□□□ -1.17
CLDND1-228ENST00000513873 FOXR1Q6PIV2 292 aa7.74□□□□□ -1.17
CLDND1-228ENST00000513873 LARP1Q6PKG0 1096 aaKnown RBP7.74□□□□□ -1.17
CLDND1-228ENST00000513873 ALYREFQ86V81 257 aaKnown RBP7.74□□□□□ -1.17
CLDND1-228ENST00000513873 VRTNQ9H8Y1 702 aa7.74□□□□□ -1.17
CLDND1-228ENST00000513873 INSM2Q96T92 566 aaPredicted RBP7.73□□□□□ -1.17
CLDND1-228ENST00000513873 ARHGEF10LQ9HCE6 1279 aa7.73□□□□□ -1.17
CLDND1-228ENST00000513873 RASA1P20936 1047 aa7.72□□□□□ -1.17
CLDND1-228ENST00000513873 SLC27A3Q5K4L6 730 aa7.72□□□□□ -1.17
CLDND1-228ENST00000513873 MBIPQ9NS73 344 aa7.72□□□□□ -1.17
CLDND1-228ENST00000513873 DNAAF2Q9NVR5 837 aaKnown RBP7.72□□□□□ -1.17
CLDND1-228ENST00000513873 BACH1O14867 736 aa7.71□□□□□ -1.18
CLDND1-228ENST00000513873 RAB6BQ9NRW1 208 aa7.71□□□□□ -1.18
CLDND1-228ENST00000513873 GDF10P55107 478 aa7.7□□□□□ -1.18
CLDND1-228ENST00000513873 CLN3Q13286 438 aa7.7□□□□□ -1.18
CLDND1-228ENST00000513873 LARGE2Q8N3Y3 721 aa7.7□□□□□ -1.18
CLDND1-228ENST00000513873 CCDC82Q8N4S0 544 aa7.7□□□□□ -1.18
CLDND1-228ENST00000513873 OGFOD1Q8N543 542 aa7.7□□□□□ -1.18
CLDND1-228ENST00000513873 CNKSR1Q969H4 720 aa7.7□□□□□ -1.18
CLDND1-228ENST00000513873 ESYT1Q9BSJ8 1104 aa7.7□□□□□ -1.18
CLDND1-228ENST00000513873 BAZ1AQ9NRL2 1556 aaPredicted RBP7.7□□□□□ -1.18
CLDND1-228ENST00000513873 GPC1P35052 558 aa7.69□□□□□ -1.18
CLDND1-228ENST00000513873 CFAP70Q5T0N1 1121 aa7.69□□□□□ -1.18
CLDND1-228ENST00000513873 XAGE2Q96GT9 111 aa7.69□□□□□ -1.18
CLDND1-228ENST00000513873 LRRC4BQ9NT99 713 aa7.69□□□□□ -1.18
CLDND1-228ENST00000513873 PCDHGA11Q9Y5H2 935 aa7.69□□□□□ -1.18
CLDND1-228ENST00000513873 LAMC3Q9Y6N6 1575 aa7.68□□□□□ -1.18
CLDND1-228ENST00000513873 KIF21AQ7Z4S6 1674 aa7.68□□□□□ -1.18
CLDND1-228ENST00000513873 INHAP05111 366 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms