RNA–Protein interactions for RNA: ENST00000513846.1

GAPDHP60-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase pseudogene 60, humanhuman

BASIC

Gene GAPDHP60, Length 995 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP60-201ENST00000513846 TMOD3Q9NYL9 352 aa13.07□□□□□ -0.32
GAPDHP60-201ENST00000513846 KCPQ6ZWJ8 1503 aa13.05□□□□□ -0.32
GAPDHP60-201ENST00000513846 MTHFSDQ2M296 383 aaKnown RBP13.05□□□□□ -0.32
GAPDHP60-201ENST00000513846 COL23A1Q86Y22 540 aaPredicted RBP13.05□□□□□ -0.32
GAPDHP60-201ENST00000513846 LOC102724428A0A0B4J2F2 783 aa13.04□□□□□ -0.32
GAPDHP60-201ENST00000513846 U2SURPO15042 1029 aaKnown RBP13.04□□□□□ -0.32
GAPDHP60-201ENST00000513846 SIK1P57059 783 aa13.04□□□□□ -0.32
GAPDHP60-201ENST00000513846 DCAF5Q96JK2 942 aa13.04□□□□□ -0.32
GAPDHP60-201ENST00000513846 MTFR1LQ9H019 292 aa13.04□□□□□ -0.32
GAPDHP60-201ENST00000513846 LGR6Q9HBX8 967 aa13.04□□□□□ -0.32
GAPDHP60-201ENST00000513846 TFCP2L1Q9NZI6 479 aa13.04□□□□□ -0.32
GAPDHP60-201ENST00000513846 AMOTQ4VCS5 1084 aa13.03□□□□□ -0.32
GAPDHP60-201ENST00000513846 MSL1Q68DK7 614 aa13.03□□□□□ -0.32
GAPDHP60-201ENST00000513846 ERVV-2B6SEH9 535 aa13.02□□□□□ -0.33
GAPDHP60-201ENST00000513846 C1orf141Q5JVX7 400 aa13.02□□□□□ -0.33
GAPDHP60-201ENST00000513846 PHACTR3Q96KR7 559 aa13.02□□□□□ -0.33
GAPDHP60-201ENST00000513846 RSPH6AQ9H0K4 717 aa13.02□□□□□ -0.33
GAPDHP60-201ENST00000513846 PPP1R1BQ9UD71 204 aaPredicted RBP13.02□□□□□ -0.33
GAPDHP60-201ENST00000513846 PHF14O94880 888 aa13.01□□□□□ -0.33
GAPDHP60-201ENST00000513846 AKAP4Q5JQC9 854 aa13.01□□□□□ -0.33
GAPDHP60-201ENST00000513846 NFATC2IPQ8NCF5 419 aa13.01□□□□□ -0.33
GAPDHP60-201ENST00000513846 SMARCC1Q92922 1105 aaPredicted RBP13.01□□□□□ -0.33
GAPDHP60-201ENST00000513846 KIAA1551Q9HCM1 1747 aa13□□□□□ -0.33
GAPDHP60-201ENST00000513846 RNMTO43148 476 aaKnown RBP13□□□□□ -0.33
GAPDHP60-201ENST00000513846 ATP6V1AP38606 617 aa13□□□□□ -0.33
GAPDHP60-201ENST00000513846 CABP4P57796 275 aa13□□□□□ -0.33
GAPDHP60-201ENST00000513846 DDX10Q13206 875 aaKnown RBP13□□□□□ -0.33
GAPDHP60-201ENST00000513846 RBM42Q9BTD8 480 aaKnown RBP13□□□□□ -0.33
GAPDHP60-201ENST00000513846 FHDC1Q9C0D6 1143 aaPredicted RBP13□□□□□ -0.33
GAPDHP60-201ENST00000513846 MAP3K5Q99683 1374 aa12.99□□□□□ -0.33
GAPDHP60-201ENST00000513846 MSH5O43196 834 aa12.99□□□□□ -0.33
GAPDHP60-201ENST00000513846 HSP90AB1P08238 724 aaKnown RBP12.99□□□□□ -0.33
GAPDHP60-201ENST00000513846 PRKAR2BP31323 418 aa12.99□□□□□ -0.33
GAPDHP60-201ENST00000513846 SLC39A6Q13433 755 aa12.99□□□□□ -0.33
GAPDHP60-201ENST00000513846 PTCD1O75127 700 aaKnown RBP12.98□□□□□ -0.33
GAPDHP60-201ENST00000513846 AK7Q96M32 723 aa12.98□□□□□ -0.33
GAPDHP60-201ENST00000513846 SLC52A2Q9HAB3 445 aa12.98□□□□□ -0.33
GAPDHP60-201ENST00000513846 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.97□□□□□ -0.33
GAPDHP60-201ENST00000513846 GNPATO15228 680 aa12.97□□□□□ -0.33
GAPDHP60-201ENST00000513846 ARXQ96QS3 562 aa12.97□□□□□ -0.33
GAPDHP60-201ENST00000513846 IL17REQ8NFR9 667 aa12.96□□□□□ -0.33
GAPDHP60-201ENST00000513846 NLGN2Q8NFZ4 835 aa12.96□□□□□ -0.33
GAPDHP60-201ENST00000513846 SYT17Q9BSW7 474 aa12.96□□□□□ -0.33
GAPDHP60-201ENST00000513846 KDM3BQ7LBC6 1761 aa12.96□□□□□ -0.34
GAPDHP60-201ENST00000513846 KIF13BQ9NQT8 1826 aa12.95□□□□□ -0.34
GAPDHP60-201ENST00000513846 U2AF1L5P0DN76 240 aaPredicted RBP12.95□□□□□ -0.34
GAPDHP60-201ENST00000513846 U2AF1Q01081 240 aaKnown RBP eCLIP12.95□□□□□ -0.34
GAPDHP60-201ENST00000513846 KLHL34Q8N239 644 aa12.95□□□□□ -0.34
GAPDHP60-201ENST00000513846 SLC16A10Q8TF71 515 aa12.95□□□□□ -0.34
GAPDHP60-201ENST00000513846 CFAP53Q96M91 514 aa12.95□□□□□ -0.34
GAPDHP60-201ENST00000513846 CEMIPQ8WUJ3 1361 aa12.94□□□□□ -0.34
GAPDHP60-201ENST00000513846 N4BP2Q86UW6 1770 aaPredicted RBP12.94□□□□□ -0.34
GAPDHP60-201ENST00000513846 DNAJC10Q8IXB1 793 aa12.94□□□□□ -0.34
GAPDHP60-201ENST00000513846 CNTNAP4Q9C0A0 1308 aa12.93□□□□□ -0.34
GAPDHP60-201ENST00000513846 KCNQ3O43525 872 aa12.93□□□□□ -0.34
GAPDHP60-201ENST00000513846 SSFA2P28290 1259 aa12.93□□□□□ -0.34
GAPDHP60-201ENST00000513846 DCTN1Q14203 1278 aa12.93□□□□□ -0.34
GAPDHP60-201ENST00000513846 SCN7AQ01118 1682 aa12.93□□□□□ -0.34
GAPDHP60-201ENST00000513846 AFDNP55196 1824 aaKnown RBP12.92□□□□□ -0.34
GAPDHP60-201ENST00000513846 LAMB4A4D0S4 1761 aa12.92□□□□□ -0.34
GAPDHP60-201ENST00000513846 GNAT3A8MTJ3 354 aa12.92□□□□□ -0.34
GAPDHP60-201ENST00000513846 CRKLP46109 303 aaKnown RBP12.92□□□□□ -0.34
GAPDHP60-201ENST00000513846 MCM10Q7L590 875 aa12.92□□□□□ -0.34
GAPDHP60-201ENST00000513846 GAS2L2Q8NHY3 880 aa12.92□□□□□ -0.34
GAPDHP60-201ENST00000513846 CHD4Q14839 1912 aa12.92□□□□□ -0.34
GAPDHP60-201ENST00000513846 BRCA1P38398 1863 aaKnown RBP12.91□□□□□ -0.34
GAPDHP60-201ENST00000513846 INTS5Q6P9B9 1019 aaKnown RBP12.91□□□□□ -0.34
GAPDHP60-201ENST00000513846 PLEKHF1Q96S99 279 aa12.91□□□□□ -0.34
GAPDHP60-201ENST00000513846 SRP68Q9UHB9 627 aaKnown RBP12.91□□□□□ -0.34
GAPDHP60-201ENST00000513846 BCORQ6W2J9 1755 aa12.91□□□□□ -0.34
GAPDHP60-201ENST00000513846 POLD1P28340 1107 aa12.9□□□□□ -0.34
GAPDHP60-201ENST00000513846 ARHGEF1Q92888 912 aaKnown RBP12.9□□□□□ -0.34
GAPDHP60-201ENST00000513846 NUDCQ9Y266 331 aa12.9□□□□□ -0.34
GAPDHP60-201ENST00000513846 PRAMEF22A3QJZ6 481 aa12.89□□□□□ -0.35
GAPDHP60-201ENST00000513846 RPS6KA4O75676 772 aa12.89□□□□□ -0.35
GAPDHP60-201ENST00000513846 CYP19A1P11511 503 aaPredicted RBP12.89□□□□□ -0.35
GAPDHP60-201ENST00000513846 RC3H1Q5TC82 1133 aaKnown RBP12.89□□□□□ -0.35
GAPDHP60-201ENST00000513846 ZNF496Q96IT1 587 aaPredicted RBP12.89□□□□□ -0.35
GAPDHP60-201ENST00000513846 ZBTB1Q9Y2K1 713 aa12.89□□□□□ -0.35
GAPDHP60-201ENST00000513846 RTCBQ9Y3I0 505 aaKnown RBP12.89□□□□□ -0.35
GAPDHP60-201ENST00000513846 FCHSD2O94868 740 aa12.88□□□□□ -0.35
GAPDHP60-201ENST00000513846 GYS1P13807 737 aa12.88□□□□□ -0.35
GAPDHP60-201ENST00000513846 FLAD1Q8NFF5 587 aa12.88□□□□□ -0.35
GAPDHP60-201ENST00000513846 THUMPD2Q9BTF0 503 aaKnown RBP12.88□□□□□ -0.35
GAPDHP60-201ENST00000513846 WWC3Q9ULE0 1092 aa12.88□□□□□ -0.35
GAPDHP60-201ENST00000513846 NRXN2Q9P2S2 1712 aa12.88□□□□□ -0.35
GAPDHP60-201ENST00000513846 SOS1Q07889 1333 aaPredicted RBP12.88□□□□□ -0.35
GAPDHP60-201ENST00000513846 MYBBP1AQ9BQG0 1328 aaKnown RBP12.88□□□□□ -0.35
GAPDHP60-201ENST00000513846 HEG1Q9ULI3 1381 aa12.87□□□□□ -0.35
GAPDHP60-201ENST00000513846 TEFQ10587 303 aa12.87□□□□□ -0.35
GAPDHP60-201ENST00000513846 RALBP1Q15311 655 aa12.87□□□□□ -0.35
GAPDHP60-201ENST00000513846 CCDC87Q9NVE4 849 aa12.87□□□□□ -0.35
GAPDHP60-201ENST00000513846 USP42Q9H9J4 1324 aaKnown RBP12.87□□□□□ -0.35
GAPDHP60-201ENST00000513846 PXDNLA1KZ92 1463 aa12.86□□□□□ -0.35
GAPDHP60-201ENST00000513846 COL15A1P39059 1388 aa12.86□□□□□ -0.35
GAPDHP60-201ENST00000513846 MMP10P09238 476 aa12.86□□□□□ -0.35
GAPDHP60-201ENST00000513846 YBX3P16989 372 aaKnown RBP eCLIP12.86□□□□□ -0.35
GAPDHP60-201ENST00000513846 PIP4K2AP48426 406 aaPredicted RBP12.86□□□□□ -0.35
GAPDHP60-201ENST00000513846 TRAPPC3LQ5T215 181 aa12.86□□□□□ -0.35
GAPDHP60-201ENST00000513846 ZNF790Q6PG37 636 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms