RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 NKX1-1Q15270 411 aaPredicted RBP15.33■□□□□ 0.04
NFKB1-211ENST00000513803 RNF181Q9P0P0 153 aa15.33■□□□□ 0.04
NFKB1-211ENST00000513803 RTCBQ9Y3I0 505 aaKnown RBP15.33■□□□□ 0.04
NFKB1-211ENST00000513803 DALRD3Q5D0E6 543 aaKnown RBP15.32■□□□□ 0.04
NFKB1-211ENST00000513803 TMOD3Q9NYL9 352 aa15.32■□□□□ 0.04
NFKB1-211ENST00000513803 PARP3Q9Y6F1 533 aa15.32■□□□□ 0.04
NFKB1-211ENST00000513803 C10orf71Q711Q0 1435 aa15.32■□□□□ 0.04
NFKB1-211ENST00000513803 RGPD2P0DJD1 1756 aa15.31■□□□□ 0.04
NFKB1-211ENST00000513803 SLC34A2O95436 690 aa15.31■□□□□ 0.04
NFKB1-211ENST00000513803 KCNA3P22001 575 aa15.31■□□□□ 0.04
NFKB1-211ENST00000513803 ITPK1Q13572 414 aa15.31■□□□□ 0.04
NFKB1-211ENST00000513803 CARD11Q9BXL7 1154 aa15.31■□□□□ 0.04
NFKB1-211ENST00000513803 KCPQ6ZWJ8 1503 aa15.31■□□□□ 0.04
NFKB1-211ENST00000513803 TOGARAM1Q9Y4F4 1720 aa15.31■□□□□ 0.04
NFKB1-211ENST00000513803 ADRA2BP18089 450 aa15.3■□□□□ 0.04
NFKB1-211ENST00000513803 HSP90AB2PQ58FF8 381 aa15.3■□□□□ 0.04
NFKB1-211ENST00000513803 DCAF5Q96JK2 942 aa15.3■□□□□ 0.04
NFKB1-211ENST00000513803 ASAP1Q9ULH1 1129 aa15.3■□□□□ 0.04
NFKB1-211ENST00000513803 SPG7Q9UQ90 795 aa15.3■□□□□ 0.04
NFKB1-211ENST00000513803 VEGFAP15692 232 aaPredicted RBP15.29■□□□□ 0.04
NFKB1-211ENST00000513803 RFC4P35249 363 aa15.29■□□□□ 0.04
NFKB1-211ENST00000513803 KIF13BQ9NQT8 1826 aa15.29■□□□□ 0.04
NFKB1-211ENST00000513803 N4BP2Q86UW6 1770 aaPredicted RBP15.29■□□□□ 0.04
NFKB1-211ENST00000513803 INSRP06213 1382 aa15.28■□□□□ 0.04
NFKB1-211ENST00000513803 ARHGEF1Q92888 912 aaKnown RBP15.28■□□□□ 0.04
NFKB1-211ENST00000513803 GYS1P13807 737 aa15.27■□□□□ 0.04
NFKB1-211ENST00000513803 RC3H1Q5TC82 1133 aaKnown RBP15.27■□□□□ 0.04
NFKB1-211ENST00000513803 ZC3H4Q9UPT8 1303 aaKnown RBP15.26■□□□□ 0.03
NFKB1-211ENST00000513803 NEUROD1Q13562 356 aa15.26■□□□□ 0.03
NFKB1-211ENST00000513803 SIN3AQ96ST3 1273 aa15.26■□□□□ 0.03
NFKB1-211ENST00000513803 ATG3Q9NT62 314 aa15.26■□□□□ 0.03
NFKB1-211ENST00000513803 ITGB4P16144 1822 aa15.25■□□□□ 0.03
NFKB1-211ENST00000513803 FYB1O15117 783 aa15.25■□□□□ 0.03
NFKB1-211ENST00000513803 SLC24A1O60721 1099 aa15.25■□□□□ 0.03
NFKB1-211ENST00000513803 GGNBP2Q9H3C7 697 aa15.25■□□□□ 0.03
NFKB1-211ENST00000513803 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.25■□□□□ 0.038e-7■□□□□ 8.8
NFKB1-211ENST00000513803 KIAA1551Q9HCM1 1747 aa15.25■□□□□ 0.03
NFKB1-211ENST00000513803 GLTPD2A6NH11 291 aa15.24■□□□□ 0.03
NFKB1-211ENST00000513803 RPS6KA4O75676 772 aa15.24■□□□□ 0.03
NFKB1-211ENST00000513803 MAP2P11137 1827 aaKnown RBP15.24■□□□□ 0.03
NFKB1-211ENST00000513803 FLT4P35916 1363 aa15.24■□□□□ 0.03
NFKB1-211ENST00000513803 KIF24Q5T7B8 1368 aa15.24■□□□□ 0.03
NFKB1-211ENST00000513803 IFNL2Q8IZJ0 200 aa15.23■□□□□ 0.03
NFKB1-211ENST00000513803 LMNB1P20700 586 aa15.22■□□□□ 0.03
NFKB1-211ENST00000513803 RBM42Q9BTD8 480 aaKnown RBP15.22■□□□□ 0.03
NFKB1-211ENST00000513803 ARFGEF1Q9Y6D6 1849 aa15.22■□□□□ 0.03
NFKB1-211ENST00000513803 PRDM10Q9NQV6 1147 aa15.21■□□□□ 0.03
NFKB1-211ENST00000513803 PCDH10Q9P2E7 1040 aa15.21■□□□□ 0.03
NFKB1-211ENST00000513803 TNRC6CQ9HCJ0 1690 aaKnown RBP15.21■□□□□ 0.03
NFKB1-211ENST00000513803 C4AP0C0L4 1744 aa15.2■□□□□ 0.02
NFKB1-211ENST00000513803 CNTNAP4Q9C0A0 1308 aa15.2■□□□□ 0.02
NFKB1-211ENST00000513803 PHKG2P15735 406 aa15.2■□□□□ 0.02
NFKB1-211ENST00000513803 CHRNA5P30532 468 aa15.2■□□□□ 0.02
NFKB1-211ENST00000513803 BRCA1P38398 1863 aaKnown RBP15.2■□□□□ 0.02
NFKB1-211ENST00000513803 DPY19L2Q6NUT2 758 aa15.19■□□□□ 0.02
NFKB1-211ENST00000513803 SLC4A9Q96Q91 983 aa15.19■□□□□ 0.02
NFKB1-211ENST00000513803 CREBZFQ9NS37 354 aa15.19■□□□□ 0.02
NFKB1-211ENST00000513803 PKD1L3Q7Z443 1732 aa15.19■□□□□ 0.02
NFKB1-211ENST00000513803 ERVV-2B6SEH9 535 aa15.18■□□□□ 0.02
NFKB1-211ENST00000513803 PPM1GO15355 546 aaPredicted RBP15.17■□□□□ 0.02
NFKB1-211ENST00000513803 RASSF7Q02833 373 aa15.17■□□□□ 0.02
NFKB1-211ENST00000513803 FKBP8Q14318 412 aa15.17■□□□□ 0.02
NFKB1-211ENST00000513803 MKRN1Q9UHC7 482 aaKnown RBP15.17■□□□□ 0.02
NFKB1-211ENST00000513803 SBF1O95248 1867 aa15.16■□□□□ 0.02
NFKB1-211ENST00000513803 KDRP35968 1356 aa15.16■□□□□ 0.02
NFKB1-211ENST00000513803 TONSLQ96HA7 1378 aa15.16■□□□□ 0.02
NFKB1-211ENST00000513803 FOXN1O15353 648 aa15.16■□□□□ 0.02
NFKB1-211ENST00000513803 CTCFP49711 727 aaPredicted RBP15.16■□□□□ 0.02
NFKB1-211ENST00000513803 DDR1Q08345 913 aa15.16■□□□□ 0.02
NFKB1-211ENST00000513803 AIDAQ96BJ3 306 aa15.16■□□□□ 0.02
NFKB1-211ENST00000513803 TESK2Q96S53 571 aa15.16■□□□□ 0.02
NFKB1-211ENST00000513803 ST20-MTHFSA0A0A6YYL1 179 aa15.15■□□□□ 0.02
NFKB1-211ENST00000513803 EYA1Q99502 592 aa15.15■□□□□ 0.02
NFKB1-211ENST00000513803 SRP68Q9UHB9 627 aaKnown RBP15.15■□□□□ 0.02
NFKB1-211ENST00000513803 EMILIN1Q9Y6C2 1016 aa15.15■□□□□ 0.02
NFKB1-211ENST00000513803 KDM6AO15550 1401 aaPredicted RBP15.15■□□□□ 0.02
NFKB1-211ENST00000513803 USP42Q9H9J4 1324 aaKnown RBP15.15■□□□□ 0.02
NFKB1-211ENST00000513803 HSP90AB1P08238 724 aaKnown RBP15.14■□□□□ 0.01
NFKB1-211ENST00000513803 CHADLQ6NUI6 762 aa15.14■□□□□ 0.01
NFKB1-211ENST00000513803 POTECB2RU33 542 aa15.13■□□□□ 0.01
NFKB1-211ENST00000513803 POLRMTO00411 1230 aaKnown RBP15.13■□□□□ 0.01
NFKB1-211ENST00000513803 ZPR1O75312 459 aa15.13■□□□□ 0.01
NFKB1-211ENST00000513803 TM4SF1P30408 202 aa15.13■□□□□ 0.01
NFKB1-211ENST00000513803 CRKLP46109 303 aaKnown RBP15.13■□□□□ 0.01
NFKB1-211ENST00000513803 NCAPD2Q15021 1401 aa15.13■□□□□ 0.01
NFKB1-211ENST00000513803 TTLL6Q8N841 843 aa15.13■□□□□ 0.01
NFKB1-211ENST00000513803 WASHC2AQ641Q2 1341 aa15.13■□□□□ 0.01
NFKB1-211ENST00000513803 CABP4P57796 275 aa15.12■□□□□ 0.01
NFKB1-211ENST00000513803 PTCD1O75127 700 aaKnown RBP15.11■□□□□ 0.01
NFKB1-211ENST00000513803 FAM161AQ3B820 660 aa15.11■□□□□ 0.01
NFKB1-211ENST00000513803 CNTNAP1P78357 1384 aa15.1■□□□□ 0.01
NFKB1-211ENST00000513803 ZNF831Q5JPB2 1677 aa15.09■□□□□ 0.01
NFKB1-211ENST00000513803 H0YIN7 160 aa15.09■□□□□ 0.01
NFKB1-211ENST00000513803 ABHD8Q96I13 439 aa15.09■□□□□ 0.01
NFKB1-211ENST00000513803 MYH14Q7Z406 1995 aaKnown RBP15.08■□□□□ 0
NFKB1-211ENST00000513803 LBX1P52954 281 aa15.08■□□□□ 0
NFKB1-211ENST00000513803 ERFEQ4G0M1 354 aa15.08■□□□□ 0
NFKB1-211ENST00000513803 PLEKHO1Q53GL0 409 aaPredicted RBP15.08■□□□□ 0
NFKB1-211ENST00000513803 WBP1LQ9NX94 342 aa15.08■□□□□ 0
NFKB1-211ENST00000513803 NFKBIEO00221 500 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms