RNA–Protein interactions for RNA: ENST00000513590.5

PACRGL-228, Transcript of parkin coregulated like, humanhuman

TSL 5

Gene PACRGL, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-228ENST00000513590 KIF13BQ9NQT8 1826 aa21.84■■□□□ 1.09
PACRGL-228ENST00000513590 RGPD2P0DJD1 1756 aa21.84■■□□□ 1.09
PACRGL-228ENST00000513590 PIM2Q9P1W9 311 aa21.83■■□□□ 1.09
PACRGL-228ENST00000513590 N4BP2Q86UW6 1770 aaPredicted RBP21.83■■□□□ 1.09
PACRGL-228ENST00000513590 TRAPPC3LQ5T215 181 aa21.82■■□□□ 1.08
PACRGL-228ENST00000513590 KIAA1551Q9HCM1 1747 aa21.82■■□□□ 1.08
PACRGL-228ENST00000513590 ATP6V1AP38606 617 aa21.81■■□□□ 1.08
PACRGL-228ENST00000513590 ITPK1Q13572 414 aa21.8■■□□□ 1.08
PACRGL-228ENST00000513590 DALRD3Q5D0E6 543 aaKnown RBP21.8■■□□□ 1.08
PACRGL-228ENST00000513590 DCAF5Q96JK2 942 aa21.8■■□□□ 1.08
PACRGL-228ENST00000513590 RTCBQ9Y3I0 505 aaKnown RBP21.8■■□□□ 1.08
PACRGL-228ENST00000513590 PARP3Q9Y6F1 533 aa21.8■■□□□ 1.08
PACRGL-228ENST00000513590 KCNA3P22001 575 aa21.79■■□□□ 1.08
PACRGL-228ENST00000513590 PUS7Q96PZ0 661 aaKnown RBP21.79■■□□□ 1.08
PACRGL-228ENST00000513590 RRS1Q15050 365 aaKnown RBP21.78■■□□□ 1.08
PACRGL-228ENST00000513590 TMOD3Q9NYL9 352 aa21.78■■□□□ 1.08
PACRGL-228ENST00000513590 NKX1-1Q15270 411 aaPredicted RBP21.77■■□□□ 1.08
PACRGL-228ENST00000513590 PCGF6Q9BYE7 350 aa21.77■■□□□ 1.08
PACRGL-228ENST00000513590 PCNTO95613 3336 aa21.77■■□□□ 1.07
PACRGL-228ENST00000513590 TNRC6CQ9HCJ0 1690 aaKnown RBP21.76■■□□□ 1.07
PACRGL-228ENST00000513590 VEGFAP15692 232 aaPredicted RBP21.76■■□□□ 1.07
PACRGL-228ENST00000513590 ITGB4P16144 1822 aa21.76■■□□□ 1.07
PACRGL-228ENST00000513590 PKD1L3Q7Z443 1732 aa21.75■■□□□ 1.07
PACRGL-228ENST00000513590 ADRA2BP18089 450 aa21.75■■□□□ 1.07
PACRGL-228ENST00000513590 ASAP1Q9ULH1 1129 aa21.75■■□□□ 1.07
PACRGL-228ENST00000513590 MAP2P11137 1827 aaKnown RBP21.75■■□□□ 1.07
PACRGL-228ENST00000513590 ZC3H4Q9UPT8 1303 aaKnown RBP21.75■■□□□ 1.07
PACRGL-228ENST00000513590 GYS1P13807 737 aa21.74■■□□□ 1.07
PACRGL-228ENST00000513590 PCDH10Q9P2E7 1040 aa21.74■■□□□ 1.07
PACRGL-228ENST00000513590 INSRP06213 1382 aa21.74■■□□□ 1.07
PACRGL-228ENST00000513590 RFC4P35249 363 aa21.73■■□□□ 1.07
PACRGL-228ENST00000513590 HSP90AB2PQ58FF8 381 aa21.73■■□□□ 1.07
PACRGL-228ENST00000513590 ARHGEF1Q92888 912 aaKnown RBP21.73■■□□□ 1.07
PACRGL-228ENST00000513590 SPG7Q9UQ90 795 aa21.73■■□□□ 1.07
PACRGL-228ENST00000513590 ARFGEF1Q9Y6D6 1849 aa21.73■■□□□ 1.07
PACRGL-228ENST00000513590 C4AP0C0L4 1744 aa21.72■■□□□ 1.07
PACRGL-228ENST00000513590 BRCA1P38398 1863 aaKnown RBP21.71■■□□□ 1.07
PACRGL-228ENST00000513590 CARD11Q9BXL7 1154 aa21.71■■□□□ 1.07
PACRGL-228ENST00000513590 GLTPD2A6NH11 291 aa21.7■■□□□ 1.06
PACRGL-228ENST00000513590 RC3H1Q5TC82 1133 aaKnown RBP21.7■■□□□ 1.06
PACRGL-228ENST00000513590 PRDM10Q9NQV6 1147 aa21.69■■□□□ 1.06
PACRGL-228ENST00000513590 ATG3Q9NT62 314 aa21.69■■□□□ 1.06
PACRGL-228ENST00000513590 RPS6KA4O75676 772 aa21.68■■□□□ 1.06
PACRGL-228ENST00000513590 FLT4P35916 1363 aa21.67■■□□□ 1.06
PACRGL-228ENST00000513590 KIF24Q5T7B8 1368 aa21.66■■□□□ 1.06
PACRGL-228ENST00000513590 LMNB1P20700 586 aa21.66■■□□□ 1.06
PACRGL-228ENST00000513590 CHRNA5P30532 468 aa21.66■■□□□ 1.06
PACRGL-228ENST00000513590 GGNBP2Q9H3C7 697 aa21.66■■□□□ 1.06
PACRGL-228ENST00000513590 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.66■■□□□ 1.069e-6■□□□□ 9.4
PACRGL-228ENST00000513590 CNTNAP4Q9C0A0 1308 aa21.65■■□□□ 1.06
PACRGL-228ENST00000513590 FYB1O15117 783 aa21.65■■□□□ 1.06
PACRGL-228ENST00000513590 FOXN1O15353 648 aa21.65■■□□□ 1.06
PACRGL-228ENST00000513590 CREBZFQ9NS37 354 aa21.65■■□□□ 1.06
PACRGL-228ENST00000513590 MKRN1Q9UHC7 482 aaKnown RBP21.65■■□□□ 1.06
PACRGL-228ENST00000513590 RASSF7Q02833 373 aa21.64■■□□□ 1.05
PACRGL-228ENST00000513590 IFNL2Q8IZJ0 200 aa21.64■■□□□ 1.05
PACRGL-228ENST00000513590 RBM42Q9BTD8 480 aaKnown RBP21.64■■□□□ 1.05
PACRGL-228ENST00000513590 KDRP35968 1356 aa21.63■■□□□ 1.05
PACRGL-228ENST00000513590 SIN3AQ96ST3 1273 aa21.63■■□□□ 1.05
PACRGL-228ENST00000513590 KDM6AO15550 1401 aaPredicted RBP21.63■■□□□ 1.05
PACRGL-228ENST00000513590 SBF1O95248 1867 aa21.62■■□□□ 1.05
PACRGL-228ENST00000513590 CTCFP49711 727 aaPredicted RBP21.62■■□□□ 1.05
PACRGL-228ENST00000513590 AIDAQ96BJ3 306 aa21.62■■□□□ 1.05
PACRGL-228ENST00000513590 SLC4A9Q96Q91 983 aa21.62■■□□□ 1.05
PACRGL-228ENST00000513590 PHKG2P15735 406 aa21.61■■□□□ 1.05
PACRGL-228ENST00000513590 NEUROD1Q13562 356 aa21.61■■□□□ 1.05
PACRGL-228ENST00000513590 DDR1Q08345 913 aa21.6■■□□□ 1.05
PACRGL-228ENST00000513590 FAM161AQ3B820 660 aa21.6■■□□□ 1.05
PACRGL-228ENST00000513590 DPY19L2Q6NUT2 758 aa21.6■■□□□ 1.05
PACRGL-228ENST00000513590 FKBP8Q14318 412 aa21.59■■□□□ 1.05
PACRGL-228ENST00000513590 NCAPD2Q15021 1401 aa21.57■■□□□ 1.04
PACRGL-228ENST00000513590 POTECB2RU33 542 aa21.57■■□□□ 1.04
PACRGL-228ENST00000513590 SLC24A1O60721 1099 aa21.57■■□□□ 1.04
PACRGL-228ENST00000513590 CHADLQ6NUI6 762 aa21.57■■□□□ 1.04
PACRGL-228ENST00000513590 SRP68Q9UHB9 627 aaKnown RBP21.57■■□□□ 1.04
PACRGL-228ENST00000513590 TONSLQ96HA7 1378 aa21.57■■□□□ 1.04
PACRGL-228ENST00000513590 USP42Q9H9J4 1324 aaKnown RBP21.56■■□□□ 1.04
PACRGL-228ENST00000513590 ERVV-2B6SEH9 535 aa21.55■■□□□ 1.04
PACRGL-228ENST00000513590 CNTNAP1P78357 1384 aa21.54■■□□□ 1.04
PACRGL-228ENST00000513590 POLRMTO00411 1230 aaKnown RBP21.54■■□□□ 1.04
PACRGL-228ENST00000513590 ABHD8Q96I13 439 aa21.54■■□□□ 1.04
PACRGL-228ENST00000513590 EMILIN1Q9Y6C2 1016 aa21.54■■□□□ 1.04
PACRGL-228ENST00000513590 ZNF831Q5JPB2 1677 aa21.53■■□□□ 1.04
PACRGL-228ENST00000513590 TESK2Q96S53 571 aa21.53■■□□□ 1.04
PACRGL-228ENST00000513590 PPM1GO15355 546 aaPredicted RBP21.52■■□□□ 1.04
PACRGL-228ENST00000513590 TM4SF1P30408 202 aa21.52■■□□□ 1.04
PACRGL-228ENST00000513590 CRKLP46109 303 aaKnown RBP21.52■■□□□ 1.04
PACRGL-228ENST00000513590 LBX1P52954 281 aa21.52■■□□□ 1.04
PACRGL-228ENST00000513590 TTLL6Q8N841 843 aa21.52■■□□□ 1.04
PACRGL-228ENST00000513590 EYA1Q99502 592 aa21.52■■□□□ 1.04
PACRGL-228ENST00000513590 MLLT1Q03111 559 aaPredicted RBP21.51■■□□□ 1.03
PACRGL-228ENST00000513590 HSP90AB1P08238 724 aaKnown RBP21.5■■□□□ 1.03
PACRGL-228ENST00000513590 NFKBIEO00221 500 aa21.49■■□□□ 1.03
PACRGL-228ENST00000513590 WBP1LQ9NX94 342 aa21.49■■□□□ 1.03
PACRGL-228ENST00000513590 COL5A3P25940 1745 aaPredicted RBP21.49■■□□□ 1.03
PACRGL-228ENST00000513590 ZPR1O75312 459 aa21.48■■□□□ 1.03
PACRGL-228ENST00000513590 VEGFBP49765 207 aa21.48■■□□□ 1.03
PACRGL-228ENST00000513590 CABP4P57796 275 aa21.48■■□□□ 1.03
PACRGL-228ENST00000513590 MYH14Q7Z406 1995 aaKnown RBP21.48■■□□□ 1.03
PACRGL-228ENST00000513590 WASHC2AQ641Q2 1341 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms