RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 KTN1Q86UP2 1357 aaKnown RBP13.34□□□□□ -0.27
TRIO-220ENST00000512979 SBNO2Q9Y2G9 1366 aa13.34□□□□□ -0.27
TRIO-220ENST00000512979 DISP2A7MBM2 1401 aa13.34□□□□□ -0.27
TRIO-220ENST00000512979 CRB1P82279 1406 aa13.34□□□□□ -0.27
TRIO-220ENST00000512979 CPSF1Q10570 1443 aaKnown RBP13.34□□□□□ -0.27
TRIO-220ENST00000512979 PSDA5PKW4 1024 aaPredicted RBP13.34□□□□□ -0.27
TRIO-220ENST00000512979 EZH2Q15910 746 aaKnown RBP13.33□□□□□ -0.28
TRIO-220ENST00000512979 TOM1L2Q6ZVM7 507 aa13.33□□□□□ -0.28
TRIO-220ENST00000512979 KCNH5Q8NCM2 988 aa13.33□□□□□ -0.28
TRIO-220ENST00000512979 SRCAPQ6ZRS2 3230 aa13.33□□□□□ -0.28
TRIO-220ENST00000512979 SEC24BO95487 1268 aa13.32□□□□□ -0.28
TRIO-220ENST00000512979 APBA3O96018 575 aa13.32□□□□□ -0.28
TRIO-220ENST00000512979 ARHGEF25Q86VW2 580 aa13.32□□□□□ -0.28
TRIO-220ENST00000512979 TMC1Q8TDI8 760 aa13.32□□□□□ -0.28
TRIO-220ENST00000512979 COLQQ9Y215 455 aaPredicted RBP13.32□□□□□ -0.28
TRIO-220ENST00000512979 AXIN2Q9Y2T1 843 aa13.32□□□□□ -0.28
TRIO-220ENST00000512979 AKAP12Q02952 1782 aa13.32□□□□□ -0.28
TRIO-220ENST00000512979 TNS1Q9HBL0 1735 aaKnown RBP13.31□□□□□ -0.28
TRIO-220ENST00000512979 TRIM26Q12899 539 aaPredicted RBP13.31□□□□□ -0.28
TRIO-220ENST00000512979 GIGYF2Q6Y7W6 1299 aaKnown RBP13.31□□□□□ -0.28
TRIO-220ENST00000512979 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRIO-220ENST00000512979 CAMKK2Q96RR4 588 aa13.31□□□□□ -0.28
TRIO-220ENST00000512979 CSB-PGBD3P0DP91 1061 aa13.3□□□□□ -0.28
TRIO-220ENST00000512979 PTCD2Q8WV60 388 aaKnown RBP13.3□□□□□ -0.28
TRIO-220ENST00000512979 WDR17Q8IZU2 1322 aa13.3□□□□□ -0.28
TRIO-220ENST00000512979 MS4A1P11836 297 aa13.29□□□□□ -0.28
TRIO-220ENST00000512979 R3HDM1Q15032 1099 aaKnown RBP13.29□□□□□ -0.28
TRIO-220ENST00000512979 HDGFL2Q7Z4V5 671 aaPredicted RBP13.29□□□□□ -0.28
TRIO-220ENST00000512979 SLC12A5Q9H2X9 1139 aa13.29□□□□□ -0.28
TRIO-220ENST00000512979 GOPCQ9HD26 462 aa13.29□□□□□ -0.28
TRIO-220ENST00000512979 COL18A1P39060 1754 aa13.29□□□□□ -0.28
TRIO-220ENST00000512979 CD163L1Q9NR16 1453 aa13.29□□□□□ -0.28
TRIO-220ENST00000512979 PARP4Q9UKK3 1724 aaKnown RBP13.28□□□□□ -0.28
TRIO-220ENST00000512979 DDB1Q16531 1140 aa13.28□□□□□ -0.28
TRIO-220ENST00000512979 NME9Q86XW9 330 aa13.28□□□□□ -0.28
TRIO-220ENST00000512979 REPIN1Q9BWE0 567 aaKnown RBP13.28□□□□□ -0.28
TRIO-220ENST00000512979 PARD3Q8TEW0 1356 aa13.28□□□□□ -0.28
TRIO-220ENST00000512979 NFAT5O94916 1531 aa13.28□□□□□ -0.28
TRIO-220ENST00000512979 MON2Q7Z3U7 1717 aa13.27□□□□□ -0.28
TRIO-220ENST00000512979 C11orf95C9JLR9 678 aaPredicted RBP13.27□□□□□ -0.29
TRIO-220ENST00000512979 FLIIQ13045 1269 aa13.27□□□□□ -0.29
TRIO-220ENST00000512979 PELP1Q8IZL8 1130 aaKnown RBP13.27□□□□□ -0.29
TRIO-220ENST00000512979 CARD10Q9BWT7 1032 aa13.27□□□□□ -0.29
TRIO-220ENST00000512979 CDHR5Q9HBB8 845 aa13.27□□□□□ -0.29
TRIO-220ENST00000512979 USP31Q70CQ4 1352 aa13.27□□□□□ -0.29
TRIO-220ENST00000512979 OVOS2A0A0G2JMS6 1433 aa13.27□□□□□ -0.29
TRIO-220ENST00000512979 OVOS2A0A0J9YW53 1432 aa13.27□□□□□ -0.29
TRIO-220ENST00000512979 OVOS2Q6IE36 1432 aa13.27□□□□□ -0.29
TRIO-220ENST00000512979 ST20-MTHFSA0A0A6YYL1 179 aa13.26□□□□□ -0.29
TRIO-220ENST00000512979 PUS7Q96PZ0 661 aaKnown RBP13.26□□□□□ -0.29
TRIO-220ENST00000512979 CDCA7Q9BWT1 371 aaPredicted RBP13.26□□□□□ -0.29
TRIO-220ENST00000512979 ANO8Q9HCE9 1232 aaPredicted RBP13.26□□□□□ -0.29
TRIO-220ENST00000512979 TERF2IPQ9NYB0 399 aa13.26□□□□□ -0.29
TRIO-220ENST00000512979 LRRC37A3O60309 1634 aa13.25□□□□□ -0.29
TRIO-220ENST00000512979 LRP5O75197 1615 aa13.25□□□□□ -0.29
TRIO-220ENST00000512979 EDC4Q6P2E9 1401 aaKnown RBP13.25□□□□□ -0.29
TRIO-220ENST00000512979 A0A1W2PP64 1363 aa13.25□□□□□ -0.29
TRIO-220ENST00000512979 TESK2Q96S53 571 aa13.25□□□□□ -0.29
TRIO-220ENST00000512979 NPDC1Q9NQX5 325 aaPredicted RBP13.25□□□□□ -0.29
TRIO-220ENST00000512979 ABCC6O95255 1503 aa13.23□□□□□ -0.29
TRIO-220ENST00000512979 CCDC7Q96M83 1385 aa13.23□□□□□ -0.29
TRIO-220ENST00000512979 MARCH10Q8NA82 808 aaPredicted RBP13.23□□□□□ -0.29
TRIO-220ENST00000512979 PCMTD1Q96MG8 357 aaPredicted RBP13.23□□□□□ -0.29
TRIO-220ENST00000512979 C1orf115Q9H7X2 142 aa13.23□□□□□ -0.29
TRIO-220ENST00000512979 PEAK1Q9H792 1746 aa13.22□□□□□ -0.29
TRIO-220ENST00000512979 NINLQ9Y2I6 1382 aa13.22□□□□□ -0.29
TRIO-220ENST00000512979 ERBB3P21860 1342 aa13.22□□□□□ -0.29
TRIO-220ENST00000512979 MAP3K7O43318 606 aa13.22□□□□□ -0.29
TRIO-220ENST00000512979 NBPF14Q5TI25 921 aa13.22□□□□□ -0.29
TRIO-220ENST00000512979 EPAS1Q99814 870 aa13.22□□□□□ -0.29
TRIO-220ENST00000512979 ARID3AQ99856 593 aa13.22□□□□□ -0.29
TRIO-220ENST00000512979 RGPD5Q99666 1765 aa13.22□□□□□ -0.29
TRIO-220ENST00000512979 EXOC5O00471 708 aa13.21□□□□□ -0.29
TRIO-220ENST00000512979 PHF14O94880 888 aa13.21□□□□□ -0.29
TRIO-220ENST00000512979 NLRP2Q9NX02 1062 aa13.21□□□□□ -0.29
TRIO-220ENST00000512979 USP54Q70EL1 1684 aa13.21□□□□□ -0.3
TRIO-220ENST00000512979 RREB1Q92766 1687 aa13.21□□□□□ -0.3
TRIO-220ENST00000512979 WNK3Q9BYP7 1800 aa13.2□□□□□ -0.3
TRIO-220ENST00000512979 SLC34A2O95436 690 aa13.2□□□□□ -0.3
TRIO-220ENST00000512979 C3orf67Q6ZVT6 689 aa13.2□□□□□ -0.3
TRIO-220ENST00000512979 PTF1AQ7RTS3 328 aa13.2□□□□□ -0.3
TRIO-220ENST00000512979 ANKRD24Q8TF21 1146 aa13.2□□□□□ -0.3
TRIO-220ENST00000512979 USP47Q96K76 1375 aa13.2□□□□□ -0.3
TRIO-220ENST00000512979 NUP188Q5SRE5 1749 aa13.19□□□□□ -0.3
TRIO-220ENST00000512979 POTEFA5A3E0 1075 aa13.19□□□□□ -0.3
TRIO-220ENST00000512979 PLSCR1O15162 318 aa13.19□□□□□ -0.3
TRIO-220ENST00000512979 GABBR2O75899 941 aa13.19□□□□□ -0.3
TRIO-220ENST00000512979 CLCN1P35523 988 aa13.19□□□□□ -0.3
TRIO-220ENST00000512979 DCBLD2Q96PD2 775 aa13.19□□□□□ -0.3
TRIO-220ENST00000512979 TMUB1Q9BVT8 246 aa13.19□□□□□ -0.3
TRIO-220ENST00000512979 BCL9O00512 1426 aa13.19□□□□□ -0.3
TRIO-220ENST00000512979 TNS2Q63HR2 1409 aa13.19□□□□□ -0.3
TRIO-220ENST00000512979 TMF1P82094 1093 aa13.18□□□□□ -0.3
TRIO-220ENST00000512979 MDM2Q00987 491 aaPredicted RBP13.18□□□□□ -0.3
TRIO-220ENST00000512979 SLC39A7Q92504 469 aa13.18□□□□□ -0.3
TRIO-220ENST00000512979 COG3Q96JB2 828 aa13.18□□□□□ -0.3
TRIO-220ENST00000512979 IL2RBP14784 551 aa13.17□□□□□ -0.3
TRIO-220ENST00000512979 IP6K1Q92551 441 aa13.17□□□□□ -0.3
TRIO-220ENST00000512979 PHOX2BQ99453 314 aa13.17□□□□□ -0.3
TRIO-220ENST00000512979 GPCPD1Q9NPB8 672 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms