RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 FERMT3Q86UX7 667 aa4.32□□□□□ -1.72
PVT1-202ENST00000512617 AMOTL1Q8IY63 956 aa4.32□□□□□ -1.72
PVT1-202ENST00000512617 TTC13Q8NBP0 860 aa4.32□□□□□ -1.72
PVT1-202ENST00000512617 MKL1Q969V6 931 aa4.32□□□□□ -1.72
PVT1-202ENST00000512617 JADE2Q9NQC1 790 aa4.32□□□□□ -1.72
PVT1-202ENST00000512617 CYLDQ9NQC7 956 aa4.32□□□□□ -1.72
PVT1-202ENST00000512617 DNAAF2Q9NVR5 837 aaKnown RBP4.32□□□□□ -1.72
PVT1-202ENST00000512617 SWAP70Q9UH65 585 aa4.32□□□□□ -1.72
PVT1-202ENST00000512617 FBXO9Q9UK97 447 aaPredicted RBP4.32□□□□□ -1.72
PVT1-202ENST00000512617 TTF2Q9UNY4 1162 aaKnown RBP4.32□□□□□ -1.72
PVT1-202ENST00000512617 ZBBXA8MT70 800 aa4.31□□□□□ -1.72
PVT1-202ENST00000512617 CFAP99D6REC4 459 aa4.31□□□□□ -1.72
PVT1-202ENST00000512617 EXOC5O00471 708 aa4.31□□□□□ -1.72
PVT1-202ENST00000512617 NEFMP07197 916 aa4.31□□□□□ -1.72
PVT1-202ENST00000512617 USP46P62068 366 aa4.31□□□□□ -1.72
PVT1-202ENST00000512617 PLCB3Q01970 1234 aa4.31□□□□□ -1.72
PVT1-202ENST00000512617 LMOD3Q0VAK6 560 aa4.31□□□□□ -1.72
PVT1-202ENST00000512617 EML3Q32P44 896 aa4.31□□□□□ -1.72
PVT1-202ENST00000512617 ZNF394Q53GI3 561 aa4.31□□□□□ -1.72
PVT1-202ENST00000512617 NBPF6Q5VWK0 638 aa4.31□□□□□ -1.72
PVT1-202ENST00000512617 TRIM50Q86XT4 487 aa4.31□□□□□ -1.72
PVT1-202ENST00000512617 RDH13Q8NBN7 331 aa4.31□□□□□ -1.72
PVT1-202ENST00000512617 SP7Q8TDD2 431 aaPredicted RBP4.31□□□□□ -1.72
PVT1-202ENST00000512617 RELTQ969Z4 430 aa4.31□□□□□ -1.72
PVT1-202ENST00000512617 RNPC3Q96LT9 517 aaKnown RBP4.31□□□□□ -1.72
PVT1-202ENST00000512617 NBPF4Q96M43 638 aa4.31□□□□□ -1.72
PVT1-202ENST00000512617 CCDC85AQ96PX6 553 aaPredicted RBP4.31□□□□□ -1.72
PVT1-202ENST00000512617 SRPK1Q96SB4 655 aaKnown RBP4.31□□□□□ -1.72
PVT1-202ENST00000512617 MKNK1Q9BUB5 465 aa4.31□□□□□ -1.72
PVT1-202ENST00000512617 PRKD2Q9BZL6 878 aa4.31□□□□□ -1.72
PVT1-202ENST00000512617 ANO8Q9HCE9 1232 aaPredicted RBP4.31□□□□□ -1.72
PVT1-202ENST00000512617 RNF19AQ9NV58 838 aa4.31□□□□□ -1.72
PVT1-202ENST00000512617 SEPT3Q9UH03 358 aa4.31□□□□□ -1.72
PVT1-202ENST00000512617 DDX41Q9UJV9 622 aaKnown RBP4.31□□□□□ -1.72
PVT1-202ENST00000512617 RBM19Q9Y4C8 960 aaKnown RBP4.31□□□□□ -1.72
PVT1-202ENST00000512617 PCDHGB7Q9Y5F8 929 aa4.31□□□□□ -1.72
PVT1-202ENST00000512617 PCDHGA10Q9Y5H3 936 aa4.31□□□□□ -1.72
PVT1-202ENST00000512617 EMILIN1Q9Y6C2 1016 aa4.31□□□□□ -1.72
PVT1-202ENST00000512617 G3V3G9 751 aa4.3□□□□□ -1.72
PVT1-202ENST00000512617 CDC45O75419 566 aa4.3□□□□□ -1.72
PVT1-202ENST00000512617 BDNFP23560 247 aa4.3□□□□□ -1.72
PVT1-202ENST00000512617 GYS2P54840 703 aa4.3□□□□□ -1.72
PVT1-202ENST00000512617 SEC13P55735 322 aa4.3□□□□□ -1.72
PVT1-202ENST00000512617 EVA1CP58658 441 aa4.3□□□□□ -1.72
PVT1-202ENST00000512617 CHMP4BP1P59074 171 aa4.3□□□□□ -1.72
PVT1-202ENST00000512617 CLDN10P78369 228 aa4.3□□□□□ -1.72
PVT1-202ENST00000512617 KCNH2Q12809 1159 aa4.3□□□□□ -1.72
PVT1-202ENST00000512617 HDAC1Q13547 482 aaPredicted RBP4.3□□□□□ -1.72
PVT1-202ENST00000512617 DHX8Q14562 1220 aaKnown RBP4.3□□□□□ -1.72
PVT1-202ENST00000512617 ZRSR2Q15696 482 aaKnown RBP4.3□□□□□ -1.72
PVT1-202ENST00000512617 MAP9Q49MG5 647 aa4.3□□□□□ -1.72
PVT1-202ENST00000512617 MAMSTRQ6ZN01 415 aa4.3□□□□□ -1.72
PVT1-202ENST00000512617 USP48Q86UV5 1035 aa4.3□□□□□ -1.72
PVT1-202ENST00000512617 WDR75Q8IWA0 830 aaKnown RBP4.3□□□□□ -1.72
PVT1-202ENST00000512617 PLPP7Q8NBV4 271 aa4.3□□□□□ -1.72
PVT1-202ENST00000512617 IL17RAQ96F46 866 aa4.3□□□□□ -1.72
PVT1-202ENST00000512617 MPHOSPH6Q99547 160 aaKnown RBP4.3□□□□□ -1.72
PVT1-202ENST00000512617 IER2Q9BTL4 223 aa4.3□□□□□ -1.72
PVT1-202ENST00000512617 SFMBT1Q9UHJ3 866 aa4.3□□□□□ -1.72
PVT1-202ENST00000512617 PCDHGC3Q9UN70 934 aa4.3□□□□□ -1.72
PVT1-202ENST00000512617 C6orf229H3BNL8 230 aa4.29□□□□□ -1.72
PVT1-202ENST00000512617 KIF3BO15066 747 aa4.29□□□□□ -1.72
PVT1-202ENST00000512617 ANP32CO43423 234 aa4.29□□□□□ -1.72
PVT1-202ENST00000512617 FAM13AO94988 1023 aa4.29□□□□□ -1.72
PVT1-202ENST00000512617 LDHAP00338 332 aaKnown RBP4.29□□□□□ -1.72
PVT1-202ENST00000512617 VIL1P09327 827 aaKnown RBP4.29□□□□□ -1.72
PVT1-202ENST00000512617 PPP4CP60510 307 aa4.29□□□□□ -1.72
PVT1-202ENST00000512617 RACK1P63244 317 aaKnown RBP4.29□□□□□ -1.72
PVT1-202ENST00000512617 SERINC3Q13530 473 aa4.29□□□□□ -1.72
PVT1-202ENST00000512617 BRD3Q15059 726 aa4.29□□□□□ -1.72
PVT1-202ENST00000512617 QTRT2Q9H974 415 aaKnown RBP4.29□□□□□ -1.72
PVT1-202ENST00000512617 HOMER2Q9NSB8 354 aa4.29□□□□□ -1.72
PVT1-202ENST00000512617 NOD1Q9Y239 953 aa4.29□□□□□ -1.72
PVT1-202ENST00000512617 EID1Q9Y6B2 187 aa4.29□□□□□ -1.72
PVT1-202ENST00000512617 ZNF500O60304 480 aaPredicted RBP4.28□□□□□ -1.72
PVT1-202ENST00000512617 PTCD1O75127 700 aaKnown RBP4.28□□□□□ -1.72
PVT1-202ENST00000512617 CAND2O75155 1236 aa4.28□□□□□ -1.72
PVT1-202ENST00000512617 PTMAP06454 111 aaKnown RBP4.28□□□□□ -1.72
PVT1-202ENST00000512617 ATF4P18848 351 aaPredicted RBP4.28□□□□□ -1.72
PVT1-202ENST00000512617 CD53P19397 219 aa4.28□□□□□ -1.72
PVT1-202ENST00000512617 GNALP38405 381 aa4.28□□□□□ -1.72
PVT1-202ENST00000512617 GUCA2AQ02747 115 aa4.28□□□□□ -1.72
PVT1-202ENST00000512617 EHHADHQ08426 723 aa4.28□□□□□ -1.72
PVT1-202ENST00000512617 DSC3Q14574 896 aa4.28□□□□□ -1.72
PVT1-202ENST00000512617 ARSHQ5FYA8 562 aa4.28□□□□□ -1.72
PVT1-202ENST00000512617 ZNF280DQ6N043 979 aa4.28□□□□□ -1.72
PVT1-202ENST00000512617 PPP4R4Q6NUP7 873 aa4.28□□□□□ -1.72
PVT1-202ENST00000512617 SIX5Q8N196 739 aa4.28□□□□□ -1.72
PVT1-202ENST00000512617 HELQQ8TDG4 1101 aa4.28□□□□□ -1.72
PVT1-202ENST00000512617 APPBP2Q92624 585 aa4.28□□□□□ -1.72
PVT1-202ENST00000512617 CRELD1Q96HD1 420 aa4.28□□□□□ -1.72
PVT1-202ENST00000512617 DMRTB1Q96MA1 342 aa4.28□□□□□ -1.72
PVT1-202ENST00000512617 FANCLQ9NW38 375 aa4.28□□□□□ -1.72
PVT1-202ENST00000512617 SIRPGQ9P1W8 387 aa4.28□□□□□ -1.72
PVT1-202ENST00000512617 NCAPD3P42695 1498 aa4.27□□□□□ -1.73
PVT1-202ENST00000512617 HAX1O00165 279 aa4.27□□□□□ -1.73
PVT1-202ENST00000512617 TNFRSF10BO14763 440 aa4.27□□□□□ -1.73
PVT1-202ENST00000512617 NR1I2O75469 434 aa4.27□□□□□ -1.73
PVT1-202ENST00000512617 SSBP05455 408 aaKnown RBP eCLIP4.27□□□□□ -1.73
PVT1-202ENST00000512617 KRT18P05783 430 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms