RNA–Protein interactions for RNA: ENST00000512394.5

SNX2-211, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-211ENST00000512394 KLHL34Q8N239 644 aa23.07■■□□□ 1.28
SNX2-211ENST00000512394 UTRNP46939 3433 aa23.07■■□□□ 1.28
SNX2-211ENST00000512394 MTHFSP49914 203 aa23.06■■□□□ 1.28
SNX2-211ENST00000512394 ATG3Q9NT62 314 aa23.06■■□□□ 1.28
SNX2-211ENST00000512394 ATP6V1AP38606 617 aa23.04■■□□□ 1.28
SNX2-211ENST00000512394 LINC00116Q8NCU8 138 aa23.04■■□□□ 1.28
SNX2-211ENST00000512394 SCN11AQ9UI33 1791 aa23.04■■□□□ 1.28
SNX2-211ENST00000512394 MSL1Q68DK7 614 aa23.03■■□□□ 1.28
SNX2-211ENST00000512394 COL5A3P25940 1745 aaPredicted RBP23.02■■□□□ 1.28
SNX2-211ENST00000512394 PHF14O94880 888 aa23.02■■□□□ 1.28
SNX2-211ENST00000512394 SSFA2P28290 1259 aa23.02■■□□□ 1.28
SNX2-211ENST00000512394 CABP4P57796 275 aa23.02■■□□□ 1.28
SNX2-211ENST00000512394 ITPK1Q13572 414 aa23.02■■□□□ 1.28
SNX2-211ENST00000512394 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.01■■□□□ 1.27
SNX2-211ENST00000512394 CHD4Q14839 1912 aa23.01■■□□□ 1.27
SNX2-211ENST00000512394 AMIGO3Q86WK7 504 aa23■■□□□ 1.27
SNX2-211ENST00000512394 VIRMAQ69YN4 1812 aaKnown RBP23■■□□□ 1.27
SNX2-211ENST00000512394 DIAPH1O60610 1272 aaKnown RBP22.99■■□□□ 1.27
SNX2-211ENST00000512394 GNPATO15228 680 aa22.98■■□□□ 1.27
SNX2-211ENST00000512394 RBM42Q9BTD8 480 aaKnown RBP22.98■■□□□ 1.27
SNX2-211ENST00000512394 COL3A1P02461 1466 aaPredicted RBP22.98■■□□□ 1.27
SNX2-211ENST00000512394 HMOX1P09601 288 aa22.97■■□□□ 1.27
SNX2-211ENST00000512394 GPR162Q16538 588 aa22.97■■□□□ 1.27
SNX2-211ENST00000512394 AKAP4Q5JQC9 854 aa22.97■■□□□ 1.27
SNX2-211ENST00000512394 CNGB1Q14028 1251 aaPredicted RBP22.96■■□□□ 1.27
SNX2-211ENST00000512394 NLGN2Q8NFZ4 835 aa22.96■■□□□ 1.27
SNX2-211ENST00000512394 CICQ96RK0 1608 aaPredicted RBP22.96■■□□□ 1.27
SNX2-211ENST00000512394 GOLGB1Q14789 3259 aaKnown RBP22.96■■□□□ 1.27
SNX2-211ENST00000512394 SMIM5Q71RC9 77 aa22.95■■□□□ 1.26
SNX2-211ENST00000512394 MRC1P22897 1456 aa22.94■■□□□ 1.26
SNX2-211ENST00000512394 NFATC2IPQ8NCF5 419 aa22.94■■□□□ 1.26
SNX2-211ENST00000512394 SLC4A9Q96Q91 983 aa22.94■■□□□ 1.26
SNX2-211ENST00000512394 CNTNAP4Q9C0A0 1308 aa22.93■■□□□ 1.26
SNX2-211ENST00000512394 PELP1Q8IZL8 1130 aaKnown RBP22.93■■□□□ 1.26
SNX2-211ENST00000512394 CD2APQ9Y5K6 639 aa22.93■■□□□ 1.26
SNX2-211ENST00000512394 TJP1Q07157 1748 aa22.93■■□□□ 1.26
SNX2-211ENST00000512394 ADAMTS7Q9UKP4 1686 aa22.93■■□□□ 1.26
SNX2-211ENST00000512394 RTCBQ9Y3I0 505 aaKnown RBP22.92■■□□□ 1.26
SNX2-211ENST00000512394 RC3H1Q5TC82 1133 aaKnown RBP22.91■■□□□ 1.26
SNX2-211ENST00000512394 C4AP0C0L4 1744 aa22.91■■□□□ 1.26
SNX2-211ENST00000512394 PTCD1O75127 700 aaKnown RBP22.9■■□□□ 1.26
SNX2-211ENST00000512394 SLC52A2Q9HAB3 445 aa22.9■■□□□ 1.26
SNX2-211ENST00000512394 MYH14Q7Z406 1995 aaKnown RBP22.89■■□□□ 1.26
SNX2-211ENST00000512394 U2SURPO15042 1029 aaKnown RBP22.89■■□□□ 1.25
SNX2-211ENST00000512394 ADRA2BP18089 450 aa22.89■■□□□ 1.25
SNX2-211ENST00000512394 MTHFSDQ2M296 383 aaKnown RBP22.89■■□□□ 1.25
SNX2-211ENST00000512394 TRAPPC3LQ5T215 181 aa22.89■■□□□ 1.25
SNX2-211ENST00000512394 RNMTO43148 476 aaKnown RBP22.87■■□□□ 1.25
SNX2-211ENST00000512394 CFAP53Q96M91 514 aa22.87■■□□□ 1.25
SNX2-211ENST00000512394 LGR6Q9HBX8 967 aa22.87■■□□□ 1.25
SNX2-211ENST00000512394 RPS6KA4O75676 772 aa22.86■■□□□ 1.25
SNX2-211ENST00000512394 GRIN3BO60391 1043 aa22.84■■□□□ 1.25
SNX2-211ENST00000512394 RFC4P35249 363 aa22.84■■□□□ 1.25
SNX2-211ENST00000512394 ARHGEF1Q92888 912 aaKnown RBP22.84■■□□□ 1.25
SNX2-211ENST00000512394 UBR2Q8IWV8 1755 aa22.84■■□□□ 1.25
SNX2-211ENST00000512394 KIF13BQ9NQT8 1826 aa22.83■■□□□ 1.25
SNX2-211ENST00000512394 MMP10P09238 476 aa22.83■■□□□ 1.25
SNX2-211ENST00000512394 YBX3P16989 372 aaKnown RBP eCLIP22.83■■□□□ 1.252e-6■□□□□ 10.4
SNX2-211ENST00000512394 CRKLP46109 303 aaKnown RBP22.83■■□□□ 1.25
SNX2-211ENST00000512394 NLGN1Q8N2Q7 840 aa22.83■■□□□ 1.25
SNX2-211ENST00000512394 ZNF784Q8NCA9 323 aaPredicted RBP22.83■■□□□ 1.25
SNX2-211ENST00000512394 GAS2L2Q8NHY3 880 aa22.83■■□□□ 1.25
SNX2-211ENST00000512394 KCPQ6ZWJ8 1503 aa22.82■■□□□ 1.24
SNX2-211ENST00000512394 PPP2R1AP30153 589 aa22.8■■□□□ 1.24
SNX2-211ENST00000512394 SIPA1L3O60292 1781 aaPredicted RBP22.8■■□□□ 1.24
SNX2-211ENST00000512394 GYS1P13807 737 aa22.79■■□□□ 1.24
SNX2-211ENST00000512394 SLC39A6Q13433 755 aa22.79■■□□□ 1.24
SNX2-211ENST00000512394 NUDCQ9Y266 331 aa22.79■■□□□ 1.24
SNX2-211ENST00000512394 GNAT3A8MTJ3 354 aa22.78■■□□□ 1.24
SNX2-211ENST00000512394 DNAJC10Q8IXB1 793 aa22.78■■□□□ 1.24
SNX2-211ENST00000512394 KIAA1551Q9HCM1 1747 aa22.77■■□□□ 1.24
SNX2-211ENST00000512394 CCDC87Q9NVE4 849 aa22.77■■□□□ 1.24
SNX2-211ENST00000512394 C10orf71Q711Q0 1435 aa22.76■■□□□ 1.23
SNX2-211ENST00000512394 PRKAR2BP31323 418 aa22.76■■□□□ 1.23
SNX2-211ENST00000512394 TEFQ10587 303 aa22.76■■□□□ 1.23
SNX2-211ENST00000512394 INTS5Q6P9B9 1019 aaKnown RBP22.76■■□□□ 1.23
SNX2-211ENST00000512394 TTC5Q8N0Z6 440 aa22.76■■□□□ 1.23
SNX2-211ENST00000512394 VSIG10Q8N0Z9 540 aa22.76■■□□□ 1.23
SNX2-211ENST00000512394 RSPH6AQ9H0K4 717 aa22.76■■□□□ 1.23
SNX2-211ENST00000512394 USP42Q9H9J4 1324 aaKnown RBP22.76■■□□□ 1.23
SNX2-211ENST00000512394 PARP3Q9Y6F1 533 aa22.75■■□□□ 1.23
SNX2-211ENST00000512394 PXDNLA1KZ92 1463 aa22.74■■□□□ 1.23
SNX2-211ENST00000512394 N4BP2Q86UW6 1770 aaPredicted RBP22.74■■□□□ 1.23
SNX2-211ENST00000512394 CYP19A1P11511 503 aaPredicted RBP22.74■■□□□ 1.23
SNX2-211ENST00000512394 DDX10Q13206 875 aaKnown RBP22.74■■□□□ 1.23
SNX2-211ENST00000512394 U2AF1L5P0DN76 240 aaPredicted RBP22.73■■□□□ 1.23
SNX2-211ENST00000512394 U2AF1Q01081 240 aaKnown RBP eCLIP22.73■■□□□ 1.23
SNX2-211ENST00000512394 IL17REQ8NFR9 667 aa22.73■■□□□ 1.23
SNX2-211ENST00000512394 SRP68Q9UHB9 627 aaKnown RBP22.73■■□□□ 1.23
SNX2-211ENST00000512394 SOS1Q07889 1333 aaPredicted RBP22.73■■□□□ 1.23
SNX2-211ENST00000512394 RALBP1Q15311 655 aa22.72■■□□□ 1.23
SNX2-211ENST00000512394 PHACTR3Q96KR7 559 aa22.72■■□□□ 1.23
SNX2-211ENST00000512394 CEMIPQ8WUJ3 1361 aa22.72■■□□□ 1.23
SNX2-211ENST00000512394 TGFB2P61812 414 aa22.71■■□□□ 1.23
SNX2-211ENST00000512394 COL15A1P39059 1388 aa22.71■■□□□ 1.23
SNX2-211ENST00000512394 ZPR1O75312 459 aa22.7■■□□□ 1.22
SNX2-211ENST00000512394 ZNF790Q6PG37 636 aa22.7■■□□□ 1.22
SNX2-211ENST00000512394 WWC3Q9ULE0 1092 aa22.7■■□□□ 1.22
SNX2-211ENST00000512394 FCHSD2O94868 740 aa22.69■■□□□ 1.22
SNX2-211ENST00000512394 FKBP8Q14318 412 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms