RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-267ENST00000512336 TMOD3Q9NYL9 352 aa17.13■□□□□ 0.33
DDR1-267ENST00000512336 RBM46Q8TBY0 533 aaKnown RBP17.12■□□□□ 0.33
DDR1-267ENST00000512336 KLRG1Q96E93 195 aa17.12■□□□□ 0.33
DDR1-267ENST00000512336 KIF24Q5T7B8 1368 aa17.12■□□□□ 0.33
DDR1-267ENST00000512336 CAPN15O75808 1086 aa17.11■□□□□ 0.33
DDR1-267ENST00000512336 FCHSD2O94868 740 aa17.11■□□□□ 0.33
DDR1-267ENST00000512336 DPEP1P16444 411 aa17.11■□□□□ 0.33
DDR1-267ENST00000512336 SPG7Q9UQ90 795 aa17.11■□□□□ 0.33
DDR1-267ENST00000512336 NCAPD2Q15021 1401 aa17.11■□□□□ 0.33
DDR1-267ENST00000512336 C9orf131Q5VYM1 1079 aa17.1■□□□□ 0.33
DDR1-267ENST00000512336 C16orf71Q8IYS4 520 aaPredicted RBP17.1■□□□□ 0.33
DDR1-267ENST00000512336 JMYQ8N9B5 988 aa17.1■□□□□ 0.33
DDR1-267ENST00000512336 EMILIN1Q9Y6C2 1016 aa17.1■□□□□ 0.33
DDR1-267ENST00000512336 TMF1P82094 1093 aa17.09■□□□□ 0.33
DDR1-267ENST00000512336 TRAPPC3LQ5T215 181 aa17.09■□□□□ 0.33
DDR1-267ENST00000512336 NLGN1Q8N2Q7 840 aa17.09■□□□□ 0.33
DDR1-267ENST00000512336 ATG3Q9NT62 314 aa17.09■□□□□ 0.33
DDR1-267ENST00000512336 CCDC87Q9NVE4 849 aa17.09■□□□□ 0.33
DDR1-267ENST00000512336 RTCBQ9Y3I0 505 aaKnown RBP17.09■□□□□ 0.33
DDR1-267ENST00000512336 KIF20BQ96Q89 1820 aa17.09■□□□□ 0.33
DDR1-267ENST00000512336 TONSLQ96HA7 1378 aa17.08■□□□□ 0.32
DDR1-267ENST00000512336 PLEKHG2Q9H7P9 1386 aa17.08■□□□□ 0.32
DDR1-267ENST00000512336 C4AP0C0L4 1744 aa17.07■□□□□ 0.32
DDR1-267ENST00000512336 KCPQ6ZWJ8 1503 aa17.07■□□□□ 0.32
DDR1-267ENST00000512336 KDRP35968 1356 aa17.07■□□□□ 0.32
DDR1-267ENST00000512336 SLC24A1O60721 1099 aa17.07■□□□□ 0.32
DDR1-267ENST00000512336 FSTL1Q12841 308 aa17.07■□□□□ 0.32
DDR1-267ENST00000512336 PHKG2P15735 406 aa17.06■□□□□ 0.32
DDR1-267ENST00000512336 ARHGEF1Q92888 912 aaKnown RBP17.06■□□□□ 0.32
DDR1-267ENST00000512336 SLC4A9Q96Q91 983 aa17.06■□□□□ 0.32
DDR1-267ENST00000512336 BRCA1P38398 1863 aaKnown RBP17.05■□□□□ 0.32
DDR1-267ENST00000512336 PPM1GO15355 546 aaPredicted RBP17.05■□□□□ 0.32
DDR1-267ENST00000512336 GYS1P13807 737 aa17.05■□□□□ 0.32
DDR1-267ENST00000512336 KCNA3P22001 575 aa17.05■□□□□ 0.32
DDR1-267ENST00000512336 IFNL2Q8IZJ0 200 aa17.05■□□□□ 0.32
DDR1-267ENST00000512336 TNS4Q8IZW8 715 aa17.05■□□□□ 0.32
DDR1-267ENST00000512336 EYA1Q99502 592 aa17.05■□□□□ 0.32
DDR1-267ENST00000512336 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.05■□□□□ 0.32
DDR1-267ENST00000512336 PARP3Q9Y6F1 533 aa17.05■□□□□ 0.32
DDR1-267ENST00000512336 KDM2BQ8NHM5 1336 aa17.03■□□□□ 0.32
DDR1-267ENST00000512336 ADRA2BP18089 450 aa17.03■□□□□ 0.32
DDR1-267ENST00000512336 RFC4P35249 363 aa17.03■□□□□ 0.32
DDR1-267ENST00000512336 RBM42Q9BTD8 480 aaKnown RBP17.03■□□□□ 0.32
DDR1-267ENST00000512336 RRAGCQ9HB90 399 aa17.03■□□□□ 0.32
DDR1-267ENST00000512336 RNF181Q9P0P0 153 aa17.03■□□□□ 0.32
DDR1-267ENST00000512336 ARFGEF1Q9Y6D6 1849 aa17.03■□□□□ 0.32
DDR1-267ENST00000512336 PRELPP51888 382 aa17.02■□□□□ 0.32
DDR1-267ENST00000512336 RC3H1Q5TC82 1133 aaKnown RBP17.02■□□□□ 0.32
DDR1-267ENST00000512336 DCAF5Q96JK2 942 aa17.02■□□□□ 0.32
DDR1-267ENST00000512336 PIM2Q9P1W9 311 aa17.02■□□□□ 0.32
DDR1-267ENST00000512336 WASHC2AQ641Q2 1341 aa17.01■□□□□ 0.31
DDR1-267ENST00000512336 CNTNAP4Q9C0A0 1308 aa17.01■□□□□ 0.31
DDR1-267ENST00000512336 RPS6KA4O75676 772 aa17.01■□□□□ 0.31
DDR1-267ENST00000512336 ANKRD26Q9UPS8 1709 aa17.01■□□□□ 0.31
DDR1-267ENST00000512336 COL5A3P25940 1745 aaPredicted RBP17■□□□□ 0.31
DDR1-267ENST00000512336 DALRD3Q5D0E6 543 aaKnown RBP17■□□□□ 0.31
DDR1-267ENST00000512336 CARD14Q9BXL6 1004 aa17■□□□□ 0.31
DDR1-267ENST00000512336 ZNF831Q5JPB2 1677 aa17■□□□□ 0.31
DDR1-267ENST00000512336 TNRC6CQ9HCJ0 1690 aaKnown RBP16.99■□□□□ 0.31
DDR1-267ENST00000512336 TRIM26Q12899 539 aaPredicted RBP16.98■□□□□ 0.31
DDR1-267ENST00000512336 SMC1BQ8NDV3 1235 aa16.98■□□□□ 0.31
DDR1-267ENST00000512336 SRP68Q9UHB9 627 aaKnown RBP16.98■□□□□ 0.31
DDR1-267ENST00000512336 ERVV-2B6SEH9 535 aa16.97■□□□□ 0.31
DDR1-267ENST00000512336 CHRNA5P30532 468 aa16.97■□□□□ 0.31
DDR1-267ENST00000512336 DDR1Q08345 913 aa16.97■□□□□ 0.31
DDR1-267ENST00000512336 FKBP8Q14318 412 aa16.96■□□□□ 0.31
DDR1-267ENST00000512336 MYH14Q7Z406 1995 aaKnown RBP16.95■□□□□ 0.3
DDR1-267ENST00000512336 HSPA1AP0DMV8 641 aaKnown RBP16.95■□□□□ 0.3
DDR1-267ENST00000512336 HSPA1BP0DMV9 641 aaKnown RBP16.95■□□□□ 0.3
DDR1-267ENST00000512336 EIF4A2Q14240 407 aaKnown RBP16.95■□□□□ 0.3
DDR1-267ENST00000512336 POLKQ9UBT6 870 aa16.95■□□□□ 0.3
DDR1-267ENST00000512336 RASSF7Q02833 373 aa16.94■□□□□ 0.3
DDR1-267ENST00000512336 CDCA8Q53HL2 280 aa16.94■□□□□ 0.3
DDR1-267ENST00000512336 KDM6AO15550 1401 aaPredicted RBP16.94■□□□□ 0.3
DDR1-267ENST00000512336 USP42Q9H9J4 1324 aaKnown RBP16.94■□□□□ 0.3
DDR1-267ENST00000512336 PTCD1O75127 700 aaKnown RBP16.93■□□□□ 0.3
DDR1-267ENST00000512336 HSP90AB1P08238 724 aaKnown RBP16.93■□□□□ 0.3
DDR1-267ENST00000512336 CRKLP46109 303 aaKnown RBP16.93■□□□□ 0.3
DDR1-267ENST00000512336 SBF1O95248 1867 aa16.93■□□□□ 0.3
DDR1-267ENST00000512336 CABP4P57796 275 aa16.92■□□□□ 0.3
DDR1-267ENST00000512336 POLRMTO00411 1230 aaKnown RBP16.91■□□□□ 0.3
DDR1-267ENST00000512336 ZC3H4Q9UPT8 1303 aaKnown RBP16.91■□□□□ 0.3
DDR1-267ENST00000512336 VEGFAP15692 232 aaPredicted RBP16.9■□□□□ 0.3
DDR1-267ENST00000512336 ZNF530Q6P9A1 599 aaPredicted RBP16.9■□□□□ 0.3
DDR1-267ENST00000512336 PCGF6Q9BYE7 350 aa16.9■□□□□ 0.3
DDR1-267ENST00000512336 GLTPD2A6NH11 291 aa16.89■□□□□ 0.29
DDR1-267ENST00000512336 TM4SF1P30408 202 aa16.89■□□□□ 0.29
DDR1-267ENST00000512336 TNNT2P45379 298 aaPredicted RBP16.89■□□□□ 0.29
DDR1-267ENST00000512336 PLEKHO1Q53GL0 409 aaPredicted RBP16.89■□□□□ 0.29
DDR1-267ENST00000512336 TJP1Q07157 1748 aa16.89■□□□□ 0.29
DDR1-267ENST00000512336 LMNB1P20700 586 aa16.88■□□□□ 0.29
DDR1-267ENST00000512336 MTHFSP49914 203 aa16.87■□□□□ 0.29
DDR1-267ENST00000512336 USPL1Q5W0Q7 1092 aa16.87■□□□□ 0.29
DDR1-267ENST00000512336 INTS5Q6P9B9 1019 aaKnown RBP16.87■□□□□ 0.29
DDR1-267ENST00000512336 ADAMTS7Q9UKP4 1686 aa16.87■□□□□ 0.29
DDR1-267ENST00000512336 NFATC2IPQ8NCF5 419 aa16.86■□□□□ 0.29
DDR1-267ENST00000512336 TIAM2Q8IVF5 1701 aa16.85■□□□□ 0.29
DDR1-267ENST00000512336 ZPR1O75312 459 aa16.85■□□□□ 0.29
DDR1-267ENST00000512336 AMOTQ4VCS5 1084 aa16.85■□□□□ 0.29
DDR1-267ENST00000512336 POTECB2RU33 542 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms