RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 CUEDC1Q9NWM3 386 aaPredicted RBP9.37□□□□□ -0.91
PDE4D-220ENST00000512069 MKRN1Q9UHC7 482 aaKnown RBP9.37□□□□□ -0.91
PDE4D-220ENST00000512069 ATP1A2P50993 1020 aa9.36□□□□□ -0.91
PDE4D-220ENST00000512069 GTF2IP78347 998 aa9.36□□□□□ -0.91
PDE4D-220ENST00000512069 NBPF10Q6P3W6 841 aaKnown RBP9.36□□□□□ -0.91
PDE4D-220ENST00000512069 NBPF15Q8N660 670 aa9.36□□□□□ -0.91
PDE4D-220ENST00000512069 PHKA2P46019 1235 aa9.35□□□□□ -0.91
PDE4D-220ENST00000512069 GDF10P55107 478 aa9.35□□□□□ -0.91
PDE4D-220ENST00000512069 NANOS1Q8WY41 292 aaKnown RBP9.35□□□□□ -0.91
PDE4D-220ENST00000512069 SLC4A9Q96Q91 983 aa9.35□□□□□ -0.91
PDE4D-220ENST00000512069 ZSCAN10Q96SZ4 725 aaPredicted RBP9.35□□□□□ -0.91
PDE4D-220ENST00000512069 GAS2L1Q99501 681 aaPredicted RBP9.35□□□□□ -0.91
PDE4D-220ENST00000512069 FHDC1Q9C0D6 1143 aaPredicted RBP9.35□□□□□ -0.91
PDE4D-220ENST00000512069 TMEM229AB2RXF0 380 aa9.34□□□□□ -0.91
PDE4D-220ENST00000512069 SPATA31C2B4DYI2 1134 aa9.34□□□□□ -0.91
PDE4D-220ENST00000512069 LMOD1P29536 600 aaPredicted RBP9.34□□□□□ -0.91
PDE4D-220ENST00000512069 INSM1Q01101 510 aaPredicted RBP9.34□□□□□ -0.91
PDE4D-220ENST00000512069 WDR44Q5JSH3 913 aa9.34□□□□□ -0.91
PDE4D-220ENST00000512069 CFAP70Q5T0N1 1121 aa9.34□□□□□ -0.91
PDE4D-220ENST00000512069 KANK4Q5T7N3 995 aaPredicted RBP9.34□□□□□ -0.91
PDE4D-220ENST00000512069 TAS1R3Q7RTX0 852 aa9.34□□□□□ -0.91
PDE4D-220ENST00000512069 LARGE2Q8N3Y3 721 aa9.34□□□□□ -0.91
PDE4D-220ENST00000512069 TMEM214Q6NUQ4 689 aaKnown RBP9.33□□□□□ -0.92
PDE4D-220ENST00000512069 RIPOR1Q6ZS17 1223 aa9.33□□□□□ -0.92
PDE4D-220ENST00000512069 SV2AQ7L0J3 742 aa9.33□□□□□ -0.92
PDE4D-220ENST00000512069 TIMMDC1Q9NPL8 285 aa9.33□□□□□ -0.92
PDE4D-220ENST00000512069 SERTAD1Q9UHV2 236 aa9.33□□□□□ -0.92
PDE4D-220ENST00000512069 LORP23490 312 aaPredicted RBP9.32□□□□□ -0.92
PDE4D-220ENST00000512069 CLDN10P78369 228 aa9.32□□□□□ -0.92
PDE4D-220ENST00000512069 KRT76Q01546 638 aa9.32□□□□□ -0.92
PDE4D-220ENST00000512069 OGFOD1Q8N543 542 aa9.32□□□□□ -0.92
PDE4D-220ENST00000512069 VRTNQ9H8Y1 702 aa9.32□□□□□ -0.92
PDE4D-220ENST00000512069 DNAAF2Q9NVR5 837 aaKnown RBP9.32□□□□□ -0.92
PDE4D-220ENST00000512069 DYRK1BQ9Y463 629 aa9.32□□□□□ -0.92
PDE4D-220ENST00000512069 BACH1O14867 736 aa9.31□□□□□ -0.92
PDE4D-220ENST00000512069 SMTNP53814 917 aa9.31□□□□□ -0.92
PDE4D-220ENST00000512069 TLR1Q15399 786 aa9.31□□□□□ -0.92
PDE4D-220ENST00000512069 DBN1Q16643 649 aa9.31□□□□□ -0.92
PDE4D-220ENST00000512069 RNFT1Q5M7Z0 435 aa9.31□□□□□ -0.92
PDE4D-220ENST00000512069 CNTNAP3BQ96NU0 1288 aa9.31□□□□□ -0.92
PDE4D-220ENST00000512069 COL25A1Q9BXS0 654 aaPredicted RBP9.31□□□□□ -0.92
PDE4D-220ENST00000512069 CNTNAP3Q9BZ76 1288 aa9.31□□□□□ -0.92
PDE4D-220ENST00000512069 SERPINA10Q9UK55 444 aa9.31□□□□□ -0.92
PDE4D-220ENST00000512069 ARID3CA6NKF2 412 aa9.3□□□□□ -0.92
PDE4D-220ENST00000512069 RASA1P20936 1047 aa9.3□□□□□ -0.92
PDE4D-220ENST00000512069 PSME1Q06323 249 aa9.3□□□□□ -0.92
PDE4D-220ENST00000512069 C4orf17Q53FE4 359 aa9.3□□□□□ -0.92
PDE4D-220ENST00000512069 CCDC102BQ68D86 513 aa9.3□□□□□ -0.92
PDE4D-220ENST00000512069 PPARGC1BQ86YN6 1023 aaKnown RBP9.3□□□□□ -0.92
PDE4D-220ENST00000512069 CDK2AP1O14519 115 aa9.29□□□□□ -0.92
PDE4D-220ENST00000512069 DKK1O94907 266 aa9.29□□□□□ -0.92
PDE4D-220ENST00000512069 GTF2E1P29083 439 aaPredicted RBP9.29□□□□□ -0.92
PDE4D-220ENST00000512069 MTFR1Q15390 333 aa9.29□□□□□ -0.92
PDE4D-220ENST00000512069 GNASQ5JWF2 1037 aa9.29□□□□□ -0.92
PDE4D-220ENST00000512069 LARP1Q6PKG0 1096 aaKnown RBP9.29□□□□□ -0.92
PDE4D-220ENST00000512069 SIX5Q8N196 739 aa9.29□□□□□ -0.92
PDE4D-220ENST00000512069 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.29□□□□□ -0.92
PDE4D-220ENST00000512069 ZNF358Q9NW07 568 aa9.29□□□□□ -0.92
PDE4D-220ENST00000512069 KIAA1024Q9UPX6 916 aa9.29□□□□□ -0.92
PDE4D-220ENST00000512069 A6NJY4 79 aa9.28□□□□□ -0.92
PDE4D-220ENST00000512069 M0R2N6 131 aa9.28□□□□□ -0.92
PDE4D-220ENST00000512069 SRPK2P78362 688 aaKnown RBP9.28□□□□□ -0.92
PDE4D-220ENST00000512069 TRIM22Q8IYM9 498 aa9.28□□□□□ -0.92
PDE4D-220ENST00000512069 ZSCAN1Q8NBB4 408 aa9.28□□□□□ -0.92
PDE4D-220ENST00000512069 TPCN2Q8NHX9 752 aa9.28□□□□□ -0.92
PDE4D-220ENST00000512069 GPAMQ9HCL2 828 aa9.28□□□□□ -0.92
PDE4D-220ENST00000512069 RHBDD1Q8TEB9 315 aa9.27□□□□□ -0.93
PDE4D-220ENST00000512069 ZNF837Q96EG3 531 aaPredicted RBP9.27□□□□□ -0.93
PDE4D-220ENST00000512069 CCDC97Q96F63 343 aaPredicted RBP9.27□□□□□ -0.93
PDE4D-220ENST00000512069 FAM196BA6NMK8 535 aa9.26□□□□□ -0.93
PDE4D-220ENST00000512069 GPR25O00155 361 aa9.26□□□□□ -0.93
PDE4D-220ENST00000512069 F11P03951 625 aa9.26□□□□□ -0.93
PDE4D-220ENST00000512069 RFX1P22670 979 aa9.26□□□□□ -0.93
PDE4D-220ENST00000512069 PTK7Q13308 1070 aa9.26□□□□□ -0.93
PDE4D-220ENST00000512069 TIMELESSQ9UNS1 1208 aa9.26□□□□□ -0.93
PDE4D-220ENST00000512069 CRTC2Q53ET0 693 aaPredicted RBP9.25□□□□□ -0.93
PDE4D-220ENST00000512069 GTPBP3Q969Y2 492 aaKnown RBP9.25□□□□□ -0.93
PDE4D-220ENST00000512069 C1orf115Q9H7X2 142 aa9.25□□□□□ -0.93
PDE4D-220ENST00000512069 STK17AQ9UEE5 414 aa9.25□□□□□ -0.93
PDE4D-220ENST00000512069 IQSEC3Q9UPP2 1182 aaPredicted RBP9.25□□□□□ -0.93
PDE4D-220ENST00000512069 RBM19Q9Y4C8 960 aaKnown RBP9.25□□□□□ -0.93
PDE4D-220ENST00000512069 USP3Q9Y6I4 520 aa9.25□□□□□ -0.93
PDE4D-220ENST00000512069 MSX1P28360 303 aa9.24□□□□□ -0.93
PDE4D-220ENST00000512069 PLA2G4AP47712 749 aa9.24□□□□□ -0.93
PDE4D-220ENST00000512069 EPHA4P54764 986 aa9.24□□□□□ -0.93
PDE4D-220ENST00000512069 ZNF594Q96JF6 807 aaPredicted RBP9.24□□□□□ -0.93
PDE4D-220ENST00000512069 RUBCNLQ9H714 662 aa9.24□□□□□ -0.93
PDE4D-220ENST00000512069 SCHIP1Q9P0W5 487 aaPredicted RBP9.24□□□□□ -0.93
PDE4D-220ENST00000512069 A0A1B0GTH6 734 aa9.23□□□□□ -0.93
PDE4D-220ENST00000512069 H7C1W4 665 aa9.23□□□□□ -0.93
PDE4D-220ENST00000512069 THBS1P07996 1170 aa9.23□□□□□ -0.93
PDE4D-220ENST00000512069 SEC13P55735 322 aa9.23□□□□□ -0.93
PDE4D-220ENST00000512069 FOXK2Q01167 660 aa9.23□□□□□ -0.93
PDE4D-220ENST00000512069 GAS6Q14393 721 aa9.23□□□□□ -0.93
PDE4D-220ENST00000512069 ANKMY2Q8IV38 441 aa9.23□□□□□ -0.93
PDE4D-220ENST00000512069 ZNF295-AS1Q8N0V1 137 aa9.23□□□□□ -0.93
PDE4D-220ENST00000512069 AIDAQ96BJ3 306 aa9.23□□□□□ -0.93
PDE4D-220ENST00000512069 NIFKQ9BYG3 293 aaKnown RBP9.23□□□□□ -0.93
PDE4D-220ENST00000512069 SFI1A8K8P3 1242 aa9.22□□□□□ -0.93
PDE4D-220ENST00000512069 USP17L15C9J2P7 530 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms