RNA–Protein interactions for RNA: ENST00000512053.1

HMGCR-211, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 465 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-211ENST00000512053 ANKRD36BQ8N2N9 1353 aa10.15□□□□□ -0.78
HMGCR-211ENST00000512053 USP47Q96K76 1375 aa10.15□□□□□ -0.78
HMGCR-211ENST00000512053 RAPGEF4Q8WZA2 1011 aa10.15□□□□□ -0.78
HMGCR-211ENST00000512053 ZBTB47Q9UFB7 747 aaPredicted RBP10.15□□□□□ -0.78
HMGCR-211ENST00000512053 A0A1W2PP64 1363 aa10.14□□□□□ -0.79
HMGCR-211ENST00000512053 HOXC9P31274 260 aa10.14□□□□□ -0.79
HMGCR-211ENST00000512053 FLAD1Q8NFF5 587 aa10.14□□□□□ -0.79
HMGCR-211ENST00000512053 NLGN2Q8NFZ4 835 aa10.14□□□□□ -0.79
HMGCR-211ENST00000512053 FAM212AQ96EL1 285 aa10.14□□□□□ -0.79
HMGCR-211ENST00000512053 TONSLQ96HA7 1378 aa10.14□□□□□ -0.79
HMGCR-211ENST00000512053 CGNL1Q0VF96 1302 aa10.13□□□□□ -0.79
HMGCR-211ENST00000512053 MAP3K19Q56UN5 1328 aa10.13□□□□□ -0.79
HMGCR-211ENST00000512053 CD163L1Q9NR16 1453 aa10.13□□□□□ -0.79
HMGCR-211ENST00000512053 TATP17735 454 aaPredicted RBP10.13□□□□□ -0.79
HMGCR-211ENST00000512053 COL23A1Q86Y22 540 aaPredicted RBP10.13□□□□□ -0.79
HMGCR-211ENST00000512053 OCEL1Q9H607 264 aa10.13□□□□□ -0.79
HMGCR-211ENST00000512053 RGPD5Q99666 1765 aa10.13□□□□□ -0.79
HMGCR-211ENST00000512053 SMG6Q86US8 1419 aaKnown RBP10.12□□□□□ -0.79
HMGCR-211ENST00000512053 PAPPAQ13219 1627 aa10.11□□□□□ -0.79
HMGCR-211ENST00000512053 MSL1Q68DK7 614 aa10.11□□□□□ -0.79
HMGCR-211ENST00000512053 GPBP1L1Q9HC44 474 aaPredicted RBP10.11□□□□□ -0.79
HMGCR-211ENST00000512053 CD2APQ9Y5K6 639 aa10.11□□□□□ -0.79
HMGCR-211ENST00000512053 MON2Q7Z3U7 1717 aa10.1□□□□□ -0.79
HMGCR-211ENST00000512053 YBX3P16989 372 aaKnown RBP eCLIP10.1□□□□□ -0.79
HMGCR-211ENST00000512053 FBLN1P23142 703 aa10.1□□□□□ -0.79
HMGCR-211ENST00000512053 RRS1Q15050 365 aaKnown RBP10.1□□□□□ -0.79
HMGCR-211ENST00000512053 NBPF6Q5VWK0 638 aa10.1□□□□□ -0.79
HMGCR-211ENST00000512053 MPRIPQ6WCQ1 1025 aa10.1□□□□□ -0.79
HMGCR-211ENST00000512053 SMARCC1Q92922 1105 aaPredicted RBP10.1□□□□□ -0.79
HMGCR-211ENST00000512053 NBPF4Q96M43 638 aa10.1□□□□□ -0.79
HMGCR-211ENST00000512053 BTAF1O14981 1849 aa10.1□□□□□ -0.79
HMGCR-211ENST00000512053 PCDH11XQ9BZA7 1347 aa10.09□□□□□ -0.79
HMGCR-211ENST00000512053 PCDH11YQ9BZA8 1340 aa10.09□□□□□ -0.79
HMGCR-211ENST00000512053 ST20-MTHFSA0A0A6YYL1 179 aa10.09□□□□□ -0.79
HMGCR-211ENST00000512053 IFFO2Q5TF58 517 aa10.09□□□□□ -0.79
HMGCR-211ENST00000512053 USHBP1Q8N6Y0 703 aa10.09□□□□□ -0.79
HMGCR-211ENST00000512053 AK7Q96M32 723 aa10.09□□□□□ -0.79
HMGCR-211ENST00000512053 RTL1A6NKG5 1358 aa10.09□□□□□ -0.79
HMGCR-211ENST00000512053 TMF1P82094 1093 aa10.08□□□□□ -0.8
HMGCR-211ENST00000512053 CDCA8Q53HL2 280 aa10.08□□□□□ -0.8
HMGCR-211ENST00000512053 MARVELD3Q96A59 401 aa10.08□□□□□ -0.8
HMGCR-211ENST00000512053 GGNBP2Q9H3C7 697 aa10.08□□□□□ -0.8
HMGCR-211ENST00000512053 USP54Q70EL1 1684 aa10.08□□□□□ -0.8
HMGCR-211ENST00000512053 LTN1O94822 1766 aa10.07□□□□□ -0.8
HMGCR-211ENST00000512053 NSD2O96028 1365 aa10.07□□□□□ -0.8
HMGCR-211ENST00000512053 PALLDQ8WX93 1383 aa10.07□□□□□ -0.8
HMGCR-211ENST00000512053 FYB1O15117 783 aa10.07□□□□□ -0.8
HMGCR-211ENST00000512053 PHF14O94880 888 aa10.07□□□□□ -0.8
HMGCR-211ENST00000512053 MEGF6O75095 1541 aa10.07□□□□□ -0.8
HMGCR-211ENST00000512053 SNPHO15079 494 aa10.06□□□□□ -0.8
HMGCR-211ENST00000512053 ZNF526Q8TF50 670 aaPredicted RBP10.06□□□□□ -0.8
HMGCR-211ENST00000512053 TESK2Q96S53 571 aa10.06□□□□□ -0.8
HMGCR-211ENST00000512053 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.06□□□□□ -0.8
HMGCR-211ENST00000512053 SPG7Q9UQ90 795 aa10.06□□□□□ -0.8
HMGCR-211ENST00000512053 NSD3Q9BZ95 1437 aa10.06□□□□□ -0.8
HMGCR-211ENST00000512053 ATP10DQ9P241 1426 aa10.06□□□□□ -0.8
HMGCR-211ENST00000512053 FAM208AQ9UK61 1670 aaKnown RBP10.06□□□□□ -0.8
HMGCR-211ENST00000512053 PPM1GO15355 546 aaPredicted RBP10.05□□□□□ -0.8
HMGCR-211ENST00000512053 HSP90AB2PQ58FF8 381 aa10.05□□□□□ -0.8
HMGCR-211ENST00000512053 PDCD7Q8N8D1 485 aaKnown RBP10.05□□□□□ -0.8
HMGCR-211ENST00000512053 INSRP06213 1382 aa10.04□□□□□ -0.8
HMGCR-211ENST00000512053 FLT4P35916 1363 aa10.04□□□□□ -0.8
HMGCR-211ENST00000512053 CHD4Q14839 1912 aa10.04□□□□□ -0.8
HMGCR-211ENST00000512053 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.04□□□□□ -0.8
HMGCR-211ENST00000512053 HSPA6P17066 643 aa10.04□□□□□ -0.8
HMGCR-211ENST00000512053 PCDHB8Q9UN66 801 aa10.04□□□□□ -0.8
HMGCR-211ENST00000512053 IGSF1Q8N6C5 1336 aa10.04□□□□□ -0.8
HMGCR-211ENST00000512053 KIF24Q5T7B8 1368 aa10.03□□□□□ -0.8
HMGCR-211ENST00000512053 PYGBP11216 843 aa10.03□□□□□ -0.8
HMGCR-211ENST00000512053 SSFA2P28290 1259 aa10.03□□□□□ -0.8
HMGCR-211ENST00000512053 TMOD3Q9NYL9 352 aa10.03□□□□□ -0.8
HMGCR-211ENST00000512053 WWC3Q9ULE0 1092 aa10.03□□□□□ -0.8
HMGCR-211ENST00000512053 QSER1Q2KHR3 1735 aa10.02□□□□□ -0.8
HMGCR-211ENST00000512053 DOT1LQ8TEK3 1739 aa10.02□□□□□ -0.8
HMGCR-211ENST00000512053 CYP27B1O15528 508 aa10.02□□□□□ -0.81
HMGCR-211ENST00000512053 ATP6V1AP38606 617 aa10.02□□□□□ -0.81
HMGCR-211ENST00000512053 PIGBQ92521 554 aa10.02□□□□□ -0.81
HMGCR-211ENST00000512053 LOC102724428A0A0B4J2F2 783 aa10.01□□□□□ -0.81
HMGCR-211ENST00000512053 POTEB3A0JP26 581 aa10.01□□□□□ -0.81
HMGCR-211ENST00000512053 GNPATO15228 680 aa10.01□□□□□ -0.81
HMGCR-211ENST00000512053 SIK1P57059 783 aa10.01□□□□□ -0.81
HMGCR-211ENST00000512053 NKX1-1Q15270 411 aaPredicted RBP10.01□□□□□ -0.81
HMGCR-211ENST00000512053 POTEBQ6S5H4 581 aa10.01□□□□□ -0.81
HMGCR-211ENST00000512053 LY75O60449 1722 aa10□□□□□ -0.81
HMGCR-211ENST00000512053 IFNL2Q8IZJ0 200 aa10□□□□□ -0.81
HMGCR-211ENST00000512053 KRTAP3-3Q9BYR6 98 aa10□□□□□ -0.81
HMGCR-211ENST00000512053 KRTAP3-2Q9BYR7 98 aa10□□□□□ -0.81
HMGCR-211ENST00000512053 EMILIN1Q9Y6C2 1016 aa10□□□□□ -0.81
HMGCR-211ENST00000512053 SHANK3Q9BYB0 1731 aa9.99□□□□□ -0.81
HMGCR-211ENST00000512053 TGFB2P61812 414 aa9.99□□□□□ -0.81
HMGCR-211ENST00000512053 TRAPPC3LQ5T215 181 aa9.99□□□□□ -0.81
HMGCR-211ENST00000512053 NLGN1Q8N2Q7 840 aa9.99□□□□□ -0.81
HMGCR-211ENST00000512053 LINC00116Q8NCU8 138 aa9.99□□□□□ -0.81
HMGCR-211ENST00000512053 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.99□□□□□ -0.811e-12■□□□□ 10.4
HMGCR-211ENST00000512053 BCS1LQ9Y276 419 aa9.99□□□□□ -0.81
HMGCR-211ENST00000512053 RTCBQ9Y3I0 505 aaKnown RBP9.99□□□□□ -0.81
HMGCR-211ENST00000512053 KAT6BQ8WYB5 2073 aa9.98□□□□□ -0.81
HMGCR-211ENST00000512053 MMP10P09238 476 aa9.98□□□□□ -0.81
HMGCR-211ENST00000512053 APLP1P51693 650 aa9.98□□□□□ -0.81
HMGCR-211ENST00000512053 DCAF8Q5TAQ9 597 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms