RNA–Protein interactions for RNA: ENST00000512042.1

SPOCK3-220, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 5

Gene SPOCK3, Length 505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-220ENST00000512042 AMPHP49418 695 aa25.47■■□□□ 1.67
SPOCK3-220ENST00000512042 RRS1Q15050 365 aaKnown RBP25.47■■□□□ 1.67
SPOCK3-220ENST00000512042 MPRIPQ6WCQ1 1025 aa25.47■■□□□ 1.67
SPOCK3-220ENST00000512042 SMG6Q86US8 1419 aaKnown RBP25.46■■□□□ 1.67
SPOCK3-220ENST00000512042 MTHFSP49914 203 aa25.46■■□□□ 1.67
SPOCK3-220ENST00000512042 FSTL1Q12841 308 aa25.45■■□□□ 1.66
SPOCK3-220ENST00000512042 ARHGAP27Q6ZUM4 889 aa25.45■■□□□ 1.66
SPOCK3-220ENST00000512042 SMARCC1Q92922 1105 aaPredicted RBP25.45■■□□□ 1.66
SPOCK3-220ENST00000512042 BCS1LQ9Y276 419 aa25.45■■□□□ 1.66
SPOCK3-220ENST00000512042 FLT4P35916 1363 aa25.44■■□□□ 1.66
SPOCK3-220ENST00000512042 SSFA2P28290 1259 aa25.44■■□□□ 1.66
SPOCK3-220ENST00000512042 RAPGEF4Q8WZA2 1011 aa25.44■■□□□ 1.66
SPOCK3-220ENST00000512042 EMILIN1Q9Y6C2 1016 aa25.44■■□□□ 1.66
SPOCK3-220ENST00000512042 C4BP0C0L5 1744 aa25.43■■□□□ 1.66
SPOCK3-220ENST00000512042 CFAP53Q96M91 514 aa25.43■■□□□ 1.66
SPOCK3-220ENST00000512042 PPM1GO15355 546 aaPredicted RBP25.42■■□□□ 1.66
SPOCK3-220ENST00000512042 NBPF6Q5VWK0 638 aa25.42■■□□□ 1.66
SPOCK3-220ENST00000512042 NBPF4Q96M43 638 aa25.42■■□□□ 1.66
SPOCK3-220ENST00000512042 INSRP06213 1382 aa25.42■■□□□ 1.66
SPOCK3-220ENST00000512042 TAF1LQ8IZX4 1826 aa25.42■■□□□ 1.66
SPOCK3-220ENST00000512042 PXDNLA1KZ92 1463 aa25.41■■□□□ 1.66
SPOCK3-220ENST00000512042 TGFB2P61812 414 aa25.41■■□□□ 1.66
SPOCK3-220ENST00000512042 USHBP1Q8N6Y0 703 aa25.41■■□□□ 1.66
SPOCK3-220ENST00000512042 TATP17735 454 aaPredicted RBP25.4■■□□□ 1.66
SPOCK3-220ENST00000512042 TOGARAM1Q9Y4F4 1720 aa25.4■■□□□ 1.66
SPOCK3-220ENST00000512042 PCDH11XQ9BZA7 1347 aa25.39■■□□□ 1.66
SPOCK3-220ENST00000512042 PCDH11YQ9BZA8 1340 aa25.39■■□□□ 1.66
SPOCK3-220ENST00000512042 A0A0G2JLW4 131 aa25.39■■□□□ 1.66
SPOCK3-220ENST00000512042 MMP10P09238 476 aa25.39■■□□□ 1.66
SPOCK3-220ENST00000512042 C9orf131Q5VYM1 1079 aa25.36■■□□□ 1.65
SPOCK3-220ENST00000512042 UBR3Q6ZT12 1888 aa25.36■■□□□ 1.65
SPOCK3-220ENST00000512042 CCER2I3L3R5 266 aa25.35■■□□□ 1.65
SPOCK3-220ENST00000512042 FCHSD2O94868 740 aa25.35■■□□□ 1.65
SPOCK3-220ENST00000512042 HSP90AB2PQ58FF8 381 aa25.35■■□□□ 1.65
SPOCK3-220ENST00000512042 LINC00116Q8NCU8 138 aa25.35■■□□□ 1.65
SPOCK3-220ENST00000512042 RGPD2P0DJD1 1756 aa25.35■■□□□ 1.65
SPOCK3-220ENST00000512042 PLEKHG2Q9H7P9 1386 aa25.34■■□□□ 1.65
SPOCK3-220ENST00000512042 GNPATO15228 680 aa25.34■■□□□ 1.65
SPOCK3-220ENST00000512042 PIGBQ92521 554 aa25.34■■□□□ 1.65
SPOCK3-220ENST00000512042 KDM2BQ8NHM5 1336 aa25.34■■□□□ 1.65
SPOCK3-220ENST00000512042 LOC102724428A0A0B4J2F2 783 aa25.33■■□□□ 1.65
SPOCK3-220ENST00000512042 CYP27B1O15528 508 aa25.33■■□□□ 1.65
SPOCK3-220ENST00000512042 DIAPH1O60610 1272 aaKnown RBP25.33■■□□□ 1.65
SPOCK3-220ENST00000512042 SIK1P57059 783 aa25.33■■□□□ 1.65
SPOCK3-220ENST00000512042 DPEP1P16444 411 aa25.32■■□□□ 1.64
SPOCK3-220ENST00000512042 MIER1Q8N108 512 aa25.32■■□□□ 1.64
SPOCK3-220ENST00000512042 NUDCQ9Y266 331 aa25.32■■□□□ 1.64
SPOCK3-220ENST00000512042 HSPA1AP0DMV8 641 aaKnown RBP25.3■■□□□ 1.64
SPOCK3-220ENST00000512042 HSPA1BP0DMV9 641 aaKnown RBP25.3■■□□□ 1.64
SPOCK3-220ENST00000512042 RRAGCQ9HB90 399 aa25.3■■□□□ 1.64
SPOCK3-220ENST00000512042 NLGN1Q8N2Q7 840 aa25.29■■□□□ 1.64
SPOCK3-220ENST00000512042 SMC1BQ8NDV3 1235 aa25.29■■□□□ 1.64
SPOCK3-220ENST00000512042 C10orf71Q711Q0 1435 aa25.29■■□□□ 1.64
SPOCK3-220ENST00000512042 KCPQ6ZWJ8 1503 aa25.28■■□□□ 1.64
SPOCK3-220ENST00000512042 SLC34A2O95436 690 aa25.28■■□□□ 1.64
SPOCK3-220ENST00000512042 IL13P35225 146 aa25.28■■□□□ 1.64
SPOCK3-220ENST00000512042 EIF4A2Q14240 407 aaKnown RBP25.28■■□□□ 1.64
SPOCK3-220ENST00000512042 CCDC87Q9NVE4 849 aa25.28■■□□□ 1.64
SPOCK3-220ENST00000512042 KIAA1551Q9HCM1 1747 aa25.28■■□□□ 1.64
SPOCK3-220ENST00000512042 N4BP2Q86UW6 1770 aaPredicted RBP25.27■■□□□ 1.64
SPOCK3-220ENST00000512042 ITPK1Q13572 414 aa25.27■■□□□ 1.64
SPOCK3-220ENST00000512042 MRS2Q9HD23 443 aa25.27■■□□□ 1.64
SPOCK3-220ENST00000512042 KIF13BQ9NQT8 1826 aa25.27■■□□□ 1.64
SPOCK3-220ENST00000512042 COL3A1P02461 1466 aaPredicted RBP25.27■■□□□ 1.64
SPOCK3-220ENST00000512042 PCNTO95613 3336 aa25.26■■□□□ 1.63
SPOCK3-220ENST00000512042 ATP6V1AP38606 617 aa25.25■■□□□ 1.63
SPOCK3-220ENST00000512042 RNF181Q9P0P0 153 aa25.25■■□□□ 1.63
SPOCK3-220ENST00000512042 TRAPPC3LQ5T215 181 aa25.24■■□□□ 1.63
SPOCK3-220ENST00000512042 NKX1-1Q15270 411 aaPredicted RBP25.23■■□□□ 1.63
SPOCK3-220ENST00000512042 KCNA3P22001 575 aa25.22■■□□□ 1.63
SPOCK3-220ENST00000512042 PIM2Q9P1W9 311 aa25.22■■□□□ 1.63
SPOCK3-220ENST00000512042 ASAP1Q9ULH1 1129 aa25.22■■□□□ 1.63
SPOCK3-220ENST00000512042 ITGB4P16144 1822 aa25.21■■□□□ 1.63
SPOCK3-220ENST00000512042 TMOD3Q9NYL9 352 aa25.21■■□□□ 1.63
SPOCK3-220ENST00000512042 RTCBQ9Y3I0 505 aaKnown RBP25.21■■□□□ 1.63
SPOCK3-220ENST00000512042 PARP3Q9Y6F1 533 aa25.21■■□□□ 1.63
SPOCK3-220ENST00000512042 WDR43Q15061 677 aaKnown RBP eCLIP25.2■■□□□ 1.62
SPOCK3-220ENST00000512042 CCDC184Q52MB2 194 aa25.2■■□□□ 1.62
SPOCK3-220ENST00000512042 DCAF5Q96JK2 942 aa25.2■■□□□ 1.62
SPOCK3-220ENST00000512042 EYA1Q99502 592 aa25.2■■□□□ 1.62
SPOCK3-220ENST00000512042 U2SURPO15042 1029 aaKnown RBP25.19■■□□□ 1.62
SPOCK3-220ENST00000512042 DALRD3Q5D0E6 543 aaKnown RBP25.19■■□□□ 1.62
SPOCK3-220ENST00000512042 PNISRQ8TF01 805 aaKnown RBP25.18■■□□□ 1.62
SPOCK3-220ENST00000512042 PNNQ9H307 717 aaKnown RBP25.18■■□□□ 1.62
SPOCK3-220ENST00000512042 GYS1P13807 737 aa25.17■■□□□ 1.62
SPOCK3-220ENST00000512042 ARHGEF1Q92888 912 aaKnown RBP25.17■■□□□ 1.62
SPOCK3-220ENST00000512042 SPG7Q9UQ90 795 aa25.17■■□□□ 1.62
SPOCK3-220ENST00000512042 U2AF1L5P0DN76 240 aaPredicted RBP25.16■■□□□ 1.62
SPOCK3-220ENST00000512042 ADRA2BP18089 450 aa25.16■■□□□ 1.62
SPOCK3-220ENST00000512042 U2AF1Q01081 240 aaKnown RBP eCLIP25.16■■□□□ 1.62
SPOCK3-220ENST00000512042 PKD1L3Q7Z443 1732 aa25.15■■□□□ 1.62
SPOCK3-220ENST00000512042 NCAPD2Q15021 1401 aa25.15■■□□□ 1.62
SPOCK3-220ENST00000512042 RFC4P35249 363 aa25.14■■□□□ 1.62
SPOCK3-220ENST00000512042 ATG3Q9NT62 314 aa25.14■■□□□ 1.62
SPOCK3-220ENST00000512042 KDRP35968 1356 aa25.14■■□□□ 1.61
SPOCK3-220ENST00000512042 C4AP0C0L4 1744 aa25.14■■□□□ 1.61
SPOCK3-220ENST00000512042 TNRC6CQ9HCJ0 1690 aaKnown RBP25.13■■□□□ 1.61
SPOCK3-220ENST00000512042 SULT6B1Q6IMI4 303 aa25.13■■□□□ 1.61
SPOCK3-220ENST00000512042 BRCA1P38398 1863 aaKnown RBP25.13■■□□□ 1.61
SPOCK3-220ENST00000512042 VEGFAP15692 232 aaPredicted RBP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms