RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 CELSR2Q9HCU4 2923 aa2.45□□□□□ -2.02
TRAPPC13-211ENST00000512009 COL15A1P39059 1388 aa2.45□□□□□ -2.02
TRAPPC13-211ENST00000512009 SMCHD1A6NHR9 2005 aa2.44□□□□□ -2.02
TRAPPC13-211ENST00000512009 USP47Q96K76 1375 aa2.44□□□□□ -2.02
TRAPPC13-211ENST00000512009 KIF26AQ9ULI4 1882 aaPredicted RBP2.44□□□□□ -2.02
TRAPPC13-211ENST00000512009 KIAA1671Q9BY89 1806 aa2.44□□□□□ -2.02
TRAPPC13-211ENST00000512009 NBPF1Q3BBV0 1214 aa2.44□□□□□ -2.02
TRAPPC13-211ENST00000512009 CD2BP2O95400 341 aaKnown RBP2.44□□□□□ -2.02
TRAPPC13-211ENST00000512009 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.44□□□□□ -2.02
TRAPPC13-211ENST00000512009 IL25Q9H293 177 aa2.44□□□□□ -2.02
TRAPPC13-211ENST00000512009 ANAPC1Q9H1A4 1944 aa2.44□□□□□ -2.02
TRAPPC13-211ENST00000512009 DCAF8L2P0C7V8 631 aa2.44□□□□□ -2.02
TRAPPC13-211ENST00000512009 PRKCSHP14314 528 aaPredicted RBP2.44□□□□□ -2.02
TRAPPC13-211ENST00000512009 BRPF1P55201 1214 aaPredicted RBP2.44□□□□□ -2.02
TRAPPC13-211ENST00000512009 RBM6P78332 1123 aaKnown RBP2.44□□□□□ -2.02
TRAPPC13-211ENST00000512009 ST3GAL1Q11201 340 aa2.44□□□□□ -2.02
TRAPPC13-211ENST00000512009 SLAIN2Q9P270 581 aa2.44□□□□□ -2.02
TRAPPC13-211ENST00000512009 ZNF469Q96JG9 3925 aaPredicted RBP2.44□□□□□ -2.02
TRAPPC13-211ENST00000512009 KTN1Q86UP2 1357 aaKnown RBP2.44□□□□□ -2.02
TRAPPC13-211ENST00000512009 CRYBG3Q68DQ2 2970 aa2.44□□□□□ -2.02
TRAPPC13-211ENST00000512009 MPHOSPH9Q99550 1183 aa2.43□□□□□ -2.02
TRAPPC13-211ENST00000512009 PALLDQ8WX93 1383 aa2.43□□□□□ -2.02
TRAPPC13-211ENST00000512009 ZNF853P0CG23 659 aa2.43□□□□□ -2.02
TRAPPC13-211ENST00000512009 RLBP1P12271 317 aa2.43□□□□□ -2.02
TRAPPC13-211ENST00000512009 ZDHHC9Q9Y397 364 aa2.43□□□□□ -2.02
TRAPPC13-211ENST00000512009 ARIH1Q9Y4X5 557 aaPredicted RBP2.43□□□□□ -2.02
TRAPPC13-211ENST00000512009 FAM163AQ96GL9 167 aaPredicted RBP2.43□□□□□ -2.02
TRAPPC13-211ENST00000512009 BACH2Q9BYV9 841 aa2.43□□□□□ -2.02
TRAPPC13-211ENST00000512009 TNNQ9UQP3 1299 aa2.43□□□□□ -2.02
TRAPPC13-211ENST00000512009 GREB1Q4ZG55 1949 aa2.43□□□□□ -2.02
TRAPPC13-211ENST00000512009 PLXNA1Q9UIW2 1896 aa2.42□□□□□ -2.02
TRAPPC13-211ENST00000512009 COL12A1Q99715 3063 aa2.42□□□□□ -2.02
TRAPPC13-211ENST00000512009 HSPA5P11021 654 aaKnown RBP2.42□□□□□ -2.02
TRAPPC13-211ENST00000512009 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.42□□□□□ -2.02
TRAPPC13-211ENST00000512009 PROM2Q8N271 834 aa2.42□□□□□ -2.02
TRAPPC13-211ENST00000512009 AKT1S1Q96B36 256 aa2.42□□□□□ -2.02
TRAPPC13-211ENST00000512009 ANP32EQ9BTT0 268 aa2.42□□□□□ -2.02
TRAPPC13-211ENST00000512009 ZNF772Q68DY9 489 aaPredicted RBP2.42□□□□□ -2.02
TRAPPC13-211ENST00000512009 ZNF292O60281 2723 aa2.42□□□□□ -2.02
TRAPPC13-211ENST00000512009 EDC4Q6P2E9 1401 aaKnown RBP2.42□□□□□ -2.02
TRAPPC13-211ENST00000512009 BCL11AQ9H165 835 aa2.42□□□□□ -2.02
TRAPPC13-211ENST00000512009 SCN9AQ15858 1988 aa2.41□□□□□ -2.02
TRAPPC13-211ENST00000512009 SPATA31A1Q5TZJ5 1347 aa2.41□□□□□ -2.02
TRAPPC13-211ENST00000512009 PDE4AP27815 886 aa2.41□□□□□ -2.02
TRAPPC13-211ENST00000512009 NKX2-3Q8TAU0 364 aa2.41□□□□□ -2.02
TRAPPC13-211ENST00000512009 BDP1A6H8Y1 2624 aa2.41□□□□□ -2.02
TRAPPC13-211ENST00000512009 CHD5Q8TDI0 1954 aa2.41□□□□□ -2.02
TRAPPC13-211ENST00000512009 PGAP2Q9UHJ9 254 aa2.41□□□□□ -2.02
TRAPPC13-211ENST00000512009 PDLIM2Q96JY6 352 aa2.41□□□□□ -2.02
TRAPPC13-211ENST00000512009 FOXP2O15409 715 aa2.4□□□□□ -2.02
TRAPPC13-211ENST00000512009 UBXN6Q9BZV1 441 aa2.4□□□□□ -2.02
TRAPPC13-211ENST00000512009 TRIM35Q9UPQ4 493 aa2.4□□□□□ -2.02
TRAPPC13-211ENST00000512009 PDCD11Q14690 1871 aaKnown RBP2.4□□□□□ -2.02
TRAPPC13-211ENST00000512009 YTHDC1Q96MU7 727 aaKnown RBP2.4□□□□□ -2.02
TRAPPC13-211ENST00000512009 RRAGDQ9NQL2 400 aaPredicted RBP2.4□□□□□ -2.02
TRAPPC13-211ENST00000512009 MYH4Q9Y623 1939 aa2.4□□□□□ -2.02
TRAPPC13-211ENST00000512009 NCKAP5LQ9HCH0 1330 aa2.4□□□□□ -2.02
TRAPPC13-211ENST00000512009 CSMD3Q7Z407 3707 aa2.4□□□□□ -2.02
TRAPPC13-211ENST00000512009 IGHDP01880 384 aa2.4□□□□□ -2.03
TRAPPC13-211ENST00000512009 GAS2L3Q86XJ1 694 aa2.4□□□□□ -2.03
TRAPPC13-211ENST00000512009 FUCA2Q9BTY2 467 aa2.4□□□□□ -2.03
TRAPPC13-211ENST00000512009 PKD1L2Q7Z442 2459 aa2.4□□□□□ -2.03
TRAPPC13-211ENST00000512009 AP5Z1O43299 807 aa2.4□□□□□ -2.03
TRAPPC13-211ENST00000512009 ANO8Q9HCE9 1232 aaPredicted RBP2.4□□□□□ -2.03
TRAPPC13-211ENST00000512009 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.4□□□□□ -2.03
TRAPPC13-211ENST00000512009 MYLKQ15746 1914 aa2.4□□□□□ -2.03
TRAPPC13-211ENST00000512009 OLIG1Q8TAK6 271 aa2.4□□□□□ -2.03
TRAPPC13-211ENST00000512009 CDCA7LQ96GN5 454 aa2.4□□□□□ -2.03
TRAPPC13-211ENST00000512009 ANK1P16157 1881 aa2.4□□□□□ -2.03
TRAPPC13-211ENST00000512009 ZNF638Q14966 1978 aaKnown RBP2.4□□□□□ -2.03
TRAPPC13-211ENST00000512009 BRAPQ7Z569 592 aa2.39□□□□□ -2.03
TRAPPC13-211ENST00000512009 KIF16BQ96L93 1317 aa2.39□□□□□ -2.03
TRAPPC13-211ENST00000512009 PAPLNO95428 1278 aa2.39□□□□□ -2.03
TRAPPC13-211ENST00000512009 SLC16A10Q8TF71 515 aa2.39□□□□□ -2.03
TRAPPC13-211ENST00000512009 COL4A2P08572 1712 aa2.39□□□□□ -2.03
TRAPPC13-211ENST00000512009 MYH6P13533 1939 aa2.39□□□□□ -2.03
TRAPPC13-211ENST00000512009 FBXO31Q5XUX0 539 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC13-211ENST00000512009 SNRKQ9NRH2 765 aa2.39□□□□□ -2.03
TRAPPC13-211ENST00000512009 CAPN2P17655 700 aa2.39□□□□□ -2.03
TRAPPC13-211ENST00000512009 SYNGAP1Q96PV0 1343 aa2.39□□□□□ -2.03
TRAPPC13-211ENST00000512009 HSPA2P54652 639 aa2.39□□□□□ -2.03
TRAPPC13-211ENST00000512009 CNKSR2Q8WXI2 1034 aa2.39□□□□□ -2.03
TRAPPC13-211ENST00000512009 ANKRD36BQ8N2N9 1353 aa2.38□□□□□ -2.03
TRAPPC13-211ENST00000512009 RIPK4P57078 832 aa2.38□□□□□ -2.03
TRAPPC13-211ENST00000512009 HHIPL1Q96JK4 782 aa2.38□□□□□ -2.03
TRAPPC13-211ENST00000512009 PITPNM2Q9BZ72 1349 aa2.38□□□□□ -2.03
TRAPPC13-211ENST00000512009 DENND4AQ7Z401 1863 aa2.38□□□□□ -2.03
TRAPPC13-211ENST00000512009 KMT2EQ8IZD2 1858 aa2.38□□□□□ -2.03
TRAPPC13-211ENST00000512009 HSD3B7Q9H2F3 369 aa2.38□□□□□ -2.03
TRAPPC13-211ENST00000512009 NPHP3Q7Z494 1330 aa2.38□□□□□ -2.03
TRAPPC13-211ENST00000512009 ERICH6BQ5W0A0 696 aa2.38□□□□□ -2.03
TRAPPC13-211ENST00000512009 PCDHB15Q9Y5E8 787 aa2.38□□□□□ -2.03
TRAPPC13-211ENST00000512009 TRRAPQ9Y4A5 3859 aa2.37□□□□□ -2.03
TRAPPC13-211ENST00000512009 CGNL1Q0VF96 1302 aa2.37□□□□□ -2.03
TRAPPC13-211ENST00000512009 TSC2P49815 1807 aa2.37□□□□□ -2.03
TRAPPC13-211ENST00000512009 LOXHD1Q8IVV2 1947 aa2.37□□□□□ -2.03
TRAPPC13-211ENST00000512009 TACC2O95359 2948 aa2.37□□□□□ -2.03
TRAPPC13-211ENST00000512009 ADGRF5Q8IZF2 1346 aa2.37□□□□□ -2.03
TRAPPC13-211ENST00000512009 TRHP20396 242 aaPredicted RBP2.37□□□□□ -2.03
TRAPPC13-211ENST00000512009 IL27Q8NEV9 243 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms