RNA–Protein interactions for RNA: ENST00000511873.6

SMN2-211, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 431 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-211ENST00000511873 RAD21O60216 631 aa11.57□□□□□ -0.56
SMN2-211ENST00000511873 NUCKS1Q9H1E3 243 aaKnown RBP11.57□□□□□ -0.56
SMN2-211ENST00000511873 MBIPQ9NS73 344 aa11.57□□□□□ -0.56
SMN2-211ENST00000511873 A0A1B0GTH6 734 aa11.56□□□□□ -0.56
SMN2-211ENST00000511873 FLIIQ13045 1269 aa11.56□□□□□ -0.56
SMN2-211ENST00000511873 POM121Q96HA1 1249 aa11.56□□□□□ -0.56
SMN2-211ENST00000511873 GPAMQ9HCL2 828 aa11.56□□□□□ -0.56
SMN2-211ENST00000511873 TLR1Q15399 786 aa11.55□□□□□ -0.56
SMN2-211ENST00000511873 C4orf17Q53FE4 359 aa11.55□□□□□ -0.56
SMN2-211ENST00000511873 INHAP05111 366 aa11.54□□□□□ -0.56
SMN2-211ENST00000511873 GDF10P55107 478 aa11.54□□□□□ -0.56
SMN2-211ENST00000511873 LYPD4Q6UWN0 246 aa11.54□□□□□ -0.56
SMN2-211ENST00000511873 PPARGC1BQ86YN6 1023 aaKnown RBP11.54□□□□□ -0.56
SMN2-211ENST00000511873 ALG2Q9H553 416 aa11.54□□□□□ -0.56
SMN2-211ENST00000511873 PIK3CDO00329 1044 aa11.53□□□□□ -0.56
SMN2-211ENST00000511873 ARHGEF15O94989 841 aa11.53□□□□□ -0.56
SMN2-211ENST00000511873 SCNN1DP51172 638 aa11.53□□□□□ -0.56
SMN2-211ENST00000511873 RHBDD1Q8TEB9 315 aa11.53□□□□□ -0.56
SMN2-211ENST00000511873 UBTFP17480 764 aaKnown RBP11.52□□□□□ -0.57
SMN2-211ENST00000511873 MAP3K10Q02779 954 aa11.52□□□□□ -0.57
SMN2-211ENST00000511873 KCNMA1Q12791 1236 aa11.52□□□□□ -0.57
SMN2-211ENST00000511873 IGF1RP08069 1367 aa11.52□□□□□ -0.57
SMN2-211ENST00000511873 CELA2BP08218 269 aaPredicted RBP11.51□□□□□ -0.57
SMN2-211ENST00000511873 CSB-PGBD3P0DP91 1061 aa11.51□□□□□ -0.57
SMN2-211ENST00000511873 SKIP12755 728 aa11.51□□□□□ -0.57
SMN2-211ENST00000511873 MX2P20592 715 aa11.51□□□□□ -0.57
SMN2-211ENST00000511873 PGBD3Q8N328 593 aa11.51□□□□□ -0.57
SMN2-211ENST00000511873 EML3Q32P44 896 aa11.5□□□□□ -0.57
SMN2-211ENST00000511873 RNF225M0QZC1 329 aaPredicted RBP11.49□□□□□ -0.57
SMN2-211ENST00000511873 LZTS3O60299 673 aaPredicted RBP11.49□□□□□ -0.57
SMN2-211ENST00000511873 MSX1P28360 303 aa11.49□□□□□ -0.57
SMN2-211ENST00000511873 SMTNP53814 917 aa11.49□□□□□ -0.57
SMN2-211ENST00000511873 MARSP56192 900 aaKnown RBP11.49□□□□□ -0.57
SMN2-211ENST00000511873 ENAMQ9NRM1 1142 aa11.49□□□□□ -0.57
SMN2-211ENST00000511873 NSFL1CQ9UNZ2 370 aaKnown RBP11.49□□□□□ -0.57
SMN2-211ENST00000511873 LBRQ14739 615 aaKnown RBP11.48□□□□□ -0.57
SMN2-211ENST00000511873 NFATC2IPQ8NCF5 419 aa11.48□□□□□ -0.57
SMN2-211ENST00000511873 CFHR5Q9BXR6 569 aa11.48□□□□□ -0.57
SMN2-211ENST00000511873 RUBCNLQ9H714 662 aa11.48□□□□□ -0.57
SMN2-211ENST00000511873 SERTAD1Q9UHV2 236 aa11.48□□□□□ -0.57
SMN2-211ENST00000511873 NOD1Q9Y239 953 aa11.48□□□□□ -0.57
SMN2-211ENST00000511873 THBS1P07996 1170 aa11.47□□□□□ -0.57
SMN2-211ENST00000511873 EFHC2Q5JST6 749 aa11.47□□□□□ -0.57
SMN2-211ENST00000511873 NIFKQ9BYG3 293 aaKnown RBP11.47□□□□□ -0.57
SMN2-211ENST00000511873 PHF24Q9UPV7 400 aa11.47□□□□□ -0.57
SMN2-211ENST00000511873 PCDHGA11Q9Y5H2 935 aa11.47□□□□□ -0.57
SMN2-211ENST00000511873 TMEM229AB2RXF0 380 aa11.46□□□□□ -0.57
SMN2-211ENST00000511873 PLA2G4AP47712 749 aa11.46□□□□□ -0.57
SMN2-211ENST00000511873 GSK3AP49840 483 aa11.46□□□□□ -0.57
SMN2-211ENST00000511873 RASSF7Q02833 373 aa11.45□□□□□ -0.58
SMN2-211ENST00000511873 TMEM132AQ24JP5 1023 aa11.45□□□□□ -0.58
SMN2-211ENST00000511873 TBC1D9Q6ZT07 1266 aa11.45□□□□□ -0.58
SMN2-211ENST00000511873 SLC4A9Q96Q91 983 aa11.45□□□□□ -0.58
SMN2-211ENST00000511873 BCRP11274 1271 aa11.44□□□□□ -0.58
SMN2-211ENST00000511873 NCOA4Q13772 614 aa11.44□□□□□ -0.58
SMN2-211ENST00000511873 ACDQ96AP0 544 aa11.44□□□□□ -0.58
SMN2-211ENST00000511873 AIDAQ96BJ3 306 aa11.44□□□□□ -0.58
SMN2-211ENST00000511873 SCARF2Q96GP6 870 aaPredicted RBP11.44□□□□□ -0.58
SMN2-211ENST00000511873 A6NJY4 79 aa11.43□□□□□ -0.58
SMN2-211ENST00000511873 POM121CA8CG34 1229 aa11.43□□□□□ -0.58
SMN2-211ENST00000511873 GDF11O95390 407 aa11.43□□□□□ -0.58
SMN2-211ENST00000511873 GTF2IP78347 998 aa11.43□□□□□ -0.58
SMN2-211ENST00000511873 UBAP2LQ14157 1087 aaKnown RBP11.43□□□□□ -0.58
SMN2-211ENST00000511873 DEPDC4Q8N2C3 294 aa11.43□□□□□ -0.58
SMN2-211ENST00000511873 TMEM151AQ8N4L1 468 aa11.43□□□□□ -0.58
SMN2-211ENST00000511873 CRISPLD1Q9H336 500 aa11.43□□□□□ -0.58
SMN2-211ENST00000511873 CDK2AP1O14519 115 aa11.42□□□□□ -0.58
SMN2-211ENST00000511873 MAP2K3P46734 347 aa11.42□□□□□ -0.58
SMN2-211ENST00000511873 PSME1Q06323 249 aa11.42□□□□□ -0.58
SMN2-211ENST00000511873 MTFR1Q15390 333 aa11.42□□□□□ -0.58
SMN2-211ENST00000511873 HDGFL1Q5TGJ6 251 aa11.42□□□□□ -0.58
SMN2-211ENST00000511873 C1orf216Q8TAB5 229 aa11.42□□□□□ -0.58
SMN2-211ENST00000511873 USP17L5A8MUK1 530 aa11.41□□□□□ -0.58
SMN2-211ENST00000511873 BACH1O14867 736 aa11.41□□□□□ -0.58
SMN2-211ENST00000511873 NEDD1Q8NHV4 660 aa11.41□□□□□ -0.58
SMN2-211ENST00000511873 IRS1P35568 1242 aa11.4□□□□□ -0.58
SMN2-211ENST00000511873 ADAMTS19Q8TE59 1207 aa11.4□□□□□ -0.58
SMN2-211ENST00000511873 LRRC4BQ9NT99 713 aa11.4□□□□□ -0.58
SMN2-211ENST00000511873 IQSEC3Q9UPP2 1182 aaPredicted RBP11.4□□□□□ -0.58
SMN2-211ENST00000511873 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.39□□□□□ -0.59
SMN2-211ENST00000511873 OXCT2Q9BYC2 517 aaPredicted RBP11.39□□□□□ -0.59
SMN2-211ENST00000511873 CABP1Q9NZU7 370 aa11.39□□□□□ -0.59
SMN2-211ENST00000511873 ATXN7L1Q9ULK2 861 aaPredicted RBP11.39□□□□□ -0.59
SMN2-211ENST00000511873 BNIP3LO60238 219 aa11.38□□□□□ -0.59
SMN2-211ENST00000511873 NBPF1Q3BBV0 1214 aa11.38□□□□□ -0.59
SMN2-211ENST00000511873 FIGNL1Q6PIW4 674 aa11.38□□□□□ -0.59
SMN2-211ENST00000511873 KCTD17Q8N5Z5 321 aa11.38□□□□□ -0.59
SMN2-211ENST00000511873 KLRG1Q96E93 195 aa11.38□□□□□ -0.59
SMN2-211ENST00000511873 ABHD17AQ96GS6 310 aa11.38□□□□□ -0.59
SMN2-211ENST00000511873 OIP5O43482 229 aa11.37□□□□□ -0.59
SMN2-211ENST00000511873 ATP4AP20648 1035 aa11.37□□□□□ -0.59
SMN2-211ENST00000511873 ARSJQ5FYB0 599 aaPredicted RBP11.37□□□□□ -0.59
SMN2-211ENST00000511873 KANK3Q6NY19 840 aa11.37□□□□□ -0.59
SMN2-211ENST00000511873 TRIM50Q86XT4 487 aa11.37□□□□□ -0.59
SMN2-211ENST00000511873 ZNF295-AS1Q8N0V1 137 aa11.37□□□□□ -0.59
SMN2-211ENST00000511873 ZNF358Q9NW07 568 aa11.37□□□□□ -0.59
SMN2-211ENST00000511873 USP3Q9Y6I4 520 aa11.37□□□□□ -0.59
SMN2-211ENST00000511873 NLRP8Q86W28 1048 aa11.36□□□□□ -0.59
SMN2-211ENST00000511873 BEND7Q8N7W2 519 aaPredicted RBP11.36□□□□□ -0.59
SMN2-211ENST00000511873 ZCCHC2Q9C0B9 1178 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms