RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 NOD1Q9Y239 953 aa8.14□□□□□ -1.11
HMGB3P13-201ENST00000511263 A0A1W2PRU2 124 aa8.13□□□□□ -1.11
HMGB3P13-201ENST00000511263 IGHA1P01876 353 aa8.13□□□□□ -1.11
HMGB3P13-201ENST00000511263 ITGB2P05107 769 aa8.13□□□□□ -1.11
HMGB3P13-201ENST00000511263 POU4F2Q12837 409 aa8.13□□□□□ -1.11
HMGB3P13-201ENST00000511263 OXLD1Q5BKU9 147 aa8.13□□□□□ -1.11
HMGB3P13-201ENST00000511263 ESCO1Q5FWF5 840 aa8.13□□□□□ -1.11
HMGB3P13-201ENST00000511263 GTPBP3Q969Y2 492 aaKnown RBP8.13□□□□□ -1.11
HMGB3P13-201ENST00000511263 CCDC97Q96F63 343 aaPredicted RBP8.13□□□□□ -1.11
HMGB3P13-201ENST00000511263 MBIPQ9NS73 344 aa8.13□□□□□ -1.11
HMGB3P13-201ENST00000511263 CHIC2Q9UKJ5 165 aa8.13□□□□□ -1.11
HMGB3P13-201ENST00000511263 ATP9BO43861 1147 aa8.12□□□□□ -1.11
HMGB3P13-201ENST00000511263 GNRH1P01148 92 aa8.12□□□□□ -1.11
HMGB3P13-201ENST00000511263 ATP1A2P50993 1020 aa8.12□□□□□ -1.11
HMGB3P13-201ENST00000511263 ACDQ96AP0 544 aa8.12□□□□□ -1.11
HMGB3P13-201ENST00000511263 RBM19Q9Y4C8 960 aaKnown RBP8.12□□□□□ -1.11
HMGB3P13-201ENST00000511263 GTF2E1P29083 439 aaPredicted RBP8.11□□□□□ -1.11
HMGB3P13-201ENST00000511263 FOXK2Q01167 660 aa8.11□□□□□ -1.11
HMGB3P13-201ENST00000511263 PLEKHM2Q8IWE5 1019 aa8.11□□□□□ -1.11
HMGB3P13-201ENST00000511263 DCAF5Q96JK2 942 aa8.11□□□□□ -1.11
HMGB3P13-201ENST00000511263 CCDC85AQ96PX6 553 aaPredicted RBP8.11□□□□□ -1.11
HMGB3P13-201ENST00000511263 GAS2L1Q99501 681 aaPredicted RBP8.11□□□□□ -1.11
HMGB3P13-201ENST00000511263 SERPINA10Q9UK55 444 aa8.11□□□□□ -1.11
HMGB3P13-201ENST00000511263 USP17L5A8MUK1 530 aa8.1□□□□□ -1.11
HMGB3P13-201ENST00000511263 GPC1P35052 558 aa8.1□□□□□ -1.11
HMGB3P13-201ENST00000511263 SCTRP47872 440 aa8.1□□□□□ -1.11
HMGB3P13-201ENST00000511263 PLA2G4EQ3MJ16 856 aa8.1□□□□□ -1.11
HMGB3P13-201ENST00000511263 NLRP3Q96P20 1036 aa8.1□□□□□ -1.11
HMGB3P13-201ENST00000511263 DYRK1BQ9Y463 629 aa8.1□□□□□ -1.11
HMGB3P13-201ENST00000511263 BCRP11274 1271 aa8.09□□□□□ -1.11
HMGB3P13-201ENST00000511263 GMCL1Q96IK5 515 aa8.09□□□□□ -1.11
HMGB3P13-201ENST00000511263 ENAMQ9NRM1 1142 aa8.09□□□□□ -1.11
HMGB3P13-201ENST00000511263 SLC27A3Q5K4L6 730 aa8.08□□□□□ -1.12
HMGB3P13-201ENST00000511263 PPP1R12CQ9BZL4 782 aa8.08□□□□□ -1.12
HMGB3P13-201ENST00000511263 GRIP2Q9C0E4 1043 aa8.08□□□□□ -1.12
HMGB3P13-201ENST00000511263 USP17L3A6NCW0 530 aa8.07□□□□□ -1.12
HMGB3P13-201ENST00000511263 USP17L4A6NCW7 530 aa8.07□□□□□ -1.12
HMGB3P13-201ENST00000511263 PSME1Q06323 249 aa8.07□□□□□ -1.12
HMGB3P13-201ENST00000511263 NCOA4Q13772 614 aa8.07□□□□□ -1.12
HMGB3P13-201ENST00000511263 NBPF10Q6P3W6 841 aaKnown RBP8.07□□□□□ -1.12
HMGB3P13-201ENST00000511263 FOXR1Q6PIV2 292 aa8.07□□□□□ -1.12
HMGB3P13-201ENST00000511263 USP17L2Q6R6M4 530 aa8.07□□□□□ -1.12
HMGB3P13-201ENST00000511263 USP17L1Q7RTZ2 530 aa8.07□□□□□ -1.12
HMGB3P13-201ENST00000511263 NBPF15Q8N660 670 aa8.07□□□□□ -1.12
HMGB3P13-201ENST00000511263 NEDD1Q8NHV4 660 aa8.07□□□□□ -1.12
HMGB3P13-201ENST00000511263 ADAMTS19Q8TE59 1207 aa8.07□□□□□ -1.12
HMGB3P13-201ENST00000511263 SPOCK3Q9BQ16 436 aa8.07□□□□□ -1.12
HMGB3P13-201ENST00000511263 PALM3A6NDB9 673 aaPredicted RBP8.06□□□□□ -1.12
HMGB3P13-201ENST00000511263 PIK3CDO00329 1044 aa8.06□□□□□ -1.12
HMGB3P13-201ENST00000511263 THBS1P07996 1170 aa8.06□□□□□ -1.12
HMGB3P13-201ENST00000511263 CLN3Q13286 438 aa8.06□□□□□ -1.12
HMGB3P13-201ENST00000511263 TBC1D9Q6ZT07 1266 aa8.06□□□□□ -1.12
HMGB3P13-201ENST00000511263 CDCA7Q9BWT1 371 aaPredicted RBP8.06□□□□□ -1.12
HMGB3P13-201ENST00000511263 OSBPL3Q9H4L5 887 aa8.06□□□□□ -1.12
HMGB3P13-201ENST00000511263 TFIP11Q9UBB9 837 aaKnown RBP8.06□□□□□ -1.12
HMGB3P13-201ENST00000511263 TTBK1Q5TCY1 1321 aaPredicted RBP8.05□□□□□ -1.12
HMGB3P13-201ENST00000511263 PHF20L1A8MW92 1017 aa8.05□□□□□ -1.12
HMGB3P13-201ENST00000511263 MSTNO14793 375 aa8.05□□□□□ -1.12
HMGB3P13-201ENST00000511263 BACH1O14867 736 aa8.05□□□□□ -1.12
HMGB3P13-201ENST00000511263 MX2P20592 715 aa8.05□□□□□ -1.12
HMGB3P13-201ENST00000511263 BEND7Q8N7W2 519 aaPredicted RBP8.05□□□□□ -1.12
HMGB3P13-201ENST00000511263 UCN2Q96RP3 112 aa8.05□□□□□ -1.12
HMGB3P13-201ENST00000511263 ARHGEF10LQ9HCE6 1279 aa8.05□□□□□ -1.12
HMGB3P13-201ENST00000511263 H7C1W4 665 aa8.04□□□□□ -1.12
HMGB3P13-201ENST00000511263 PROCP04070 461 aa8.04□□□□□ -1.12
HMGB3P13-201ENST00000511263 GTF2IP78347 998 aa8.04□□□□□ -1.12
HMGB3P13-201ENST00000511263 LARP1Q6PKG0 1096 aaKnown RBP8.04□□□□□ -1.12
HMGB3P13-201ENST00000511263 TRERF1Q96PN7 1200 aa8.04□□□□□ -1.12
HMGB3P13-201ENST00000511263 VRTNQ9H8Y1 702 aa8.04□□□□□ -1.12
HMGB3P13-201ENST00000511263 TIMMDC1Q9NPL8 285 aa8.04□□□□□ -1.12
HMGB3P13-201ENST00000511263 RAB6BQ9NRW1 208 aa8.04□□□□□ -1.12
HMGB3P13-201ENST00000511263 MAFBQ9Y5Q3 323 aaPredicted RBP8.04□□□□□ -1.12
HMGB3P13-201ENST00000511263 SPATA31C2B4DYI2 1134 aa8.03□□□□□ -1.12
HMGB3P13-201ENST00000511263 ADAM23O75077 832 aa8.03□□□□□ -1.12
HMGB3P13-201ENST00000511263 LMOD1P29536 600 aaPredicted RBP8.03□□□□□ -1.12
HMGB3P13-201ENST00000511263 PODNQ7Z5L7 613 aa8.03□□□□□ -1.12
HMGB3P13-201ENST00000511263 ESYT1Q9BSJ8 1104 aa8.03□□□□□ -1.12
HMGB3P13-201ENST00000511263 NUCKS1Q9H1E3 243 aaKnown RBP8.03□□□□□ -1.12
HMGB3P13-201ENST00000511263 MKRN1Q9UHC7 482 aaKnown RBP8.03□□□□□ -1.12
HMGB3P13-201ENST00000511263 WASLO00401 505 aaPredicted RBP8.02□□□□□ -1.13
HMGB3P13-201ENST00000511263 OIP5O43482 229 aa8.02□□□□□ -1.13
HMGB3P13-201ENST00000511263 SNRPNP63162 240 aaKnown RBP8.02□□□□□ -1.13
HMGB3P13-201ENST00000511263 TSGA10IPQ3SY00 556 aa8.02□□□□□ -1.13
HMGB3P13-201ENST00000511263 TAS1R3Q7RTX0 852 aa8.02□□□□□ -1.13
HMGB3P13-201ENST00000511263 DEPDC4Q8N2C3 294 aa8.02□□□□□ -1.13
HMGB3P13-201ENST00000511263 LARGE2Q8N3Y3 721 aa8.02□□□□□ -1.13
HMGB3P13-201ENST00000511263 CNKSR1Q969H4 720 aa8.02□□□□□ -1.13
HMGB3P13-201ENST00000511263 GPAMQ9HCL2 828 aa8.02□□□□□ -1.13
HMGB3P13-201ENST00000511263 DNAAF2Q9NVR5 837 aaKnown RBP8.02□□□□□ -1.13
HMGB3P13-201ENST00000511263 F11P03951 625 aa8.01□□□□□ -1.13
HMGB3P13-201ENST00000511263 XP32Q5T750 250 aa8.01□□□□□ -1.13
HMGB3P13-201ENST00000511263 C1orf229Q6ZS94 237 aaPredicted RBP8.01□□□□□ -1.13
HMGB3P13-201ENST00000511263 SHISA8B8ZZ34 492 aa8□□□□□ -1.13
HMGB3P13-201ENST00000511263 IL2RAP01589 272 aa8□□□□□ -1.13
HMGB3P13-201ENST00000511263 RASA1P20936 1047 aa8□□□□□ -1.13
HMGB3P13-201ENST00000511263 PHKA2P46019 1235 aa8□□□□□ -1.13
HMGB3P13-201ENST00000511263 GDF10P55107 478 aa8□□□□□ -1.13
HMGB3P13-201ENST00000511263 WDR44Q5JSH3 913 aa8□□□□□ -1.13
HMGB3P13-201ENST00000511263 GNASQ5JWF2 1037 aa8□□□□□ -1.13
HMGB3P13-201ENST00000511263 OGFOD1Q8N543 542 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms