RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 ATP9BO43861 1147 aa7.53□□□□□ -1.2
NEK1-204ENST00000509912 TAGLNQ01995 201 aaKnown RBP7.53□□□□□ -1.2
NEK1-204ENST00000509912 NOVA2Q9UNW9 492 aaKnown RBP7.53□□□□□ -1.2
NEK1-204ENST00000509912 ALKQ9UM73 1620 aa7.53□□□□□ -1.2
NEK1-204ENST00000509912 USP46P62068 366 aa7.52□□□□□ -1.21
NEK1-204ENST00000509912 ATG7O95352 703 aa7.52□□□□□ -1.21
NEK1-204ENST00000509912 MARVELD3Q96A59 401 aa7.52□□□□□ -1.21
NEK1-204ENST00000509912 TMEM131LA2VDJ0 1609 aa7.52□□□□□ -1.21
NEK1-204ENST00000509912 ANKRD30AQ9BXX3 1397 aa7.51□□□□□ -1.21
NEK1-204ENST00000509912 USP17L5A8MUK1 530 aa7.51□□□□□ -1.21
NEK1-204ENST00000509912 CEBPAP49715 358 aaPredicted RBP7.51□□□□□ -1.21
NEK1-204ENST00000509912 AFAP1Q8N556 730 aa7.51□□□□□ -1.21
NEK1-204ENST00000509912 CHD2O14647 1828 aaKnown RBP7.51□□□□□ -1.21
NEK1-204ENST00000509912 RRBP1Q9P2E9 1410 aaKnown RBP7.51□□□□□ -1.21
NEK1-204ENST00000509912 ATP6V1AP38606 617 aa7.51□□□□□ -1.21
NEK1-204ENST00000509912 MTMR3Q13615 1198 aa7.51□□□□□ -1.21
NEK1-204ENST00000509912 ESF1Q9H501 851 aaKnown RBP7.51□□□□□ -1.21
NEK1-204ENST00000509912 VARS2Q5ST30 1063 aaKnown RBP7.5□□□□□ -1.21
NEK1-204ENST00000509912 MKRN1Q9UHC7 482 aaKnown RBP7.5□□□□□ -1.21
NEK1-204ENST00000509912 CTHP32929 405 aa7.5□□□□□ -1.21
NEK1-204ENST00000509912 NPHP4O75161 1426 aaPredicted RBP7.49□□□□□ -1.21
NEK1-204ENST00000509912 KNDC1Q76NI1 1749 aa7.49□□□□□ -1.21
NEK1-204ENST00000509912 PRDM9Q9NQV7 894 aa7.49□□□□□ -1.21
NEK1-204ENST00000509912 XIRP1Q702N8 1843 aaKnown RBP7.49□□□□□ -1.21
NEK1-204ENST00000509912 FAM135BQ49AJ0 1406 aa7.49□□□□□ -1.21
NEK1-204ENST00000509912 RASA1P20936 1047 aa7.49□□□□□ -1.21
NEK1-204ENST00000509912 CAPN12Q6ZSI9 719 aa7.49□□□□□ -1.21
NEK1-204ENST00000509912 THEMISQ8N1K5 641 aaPredicted RBP7.49□□□□□ -1.21
NEK1-204ENST00000509912 SLC52A1Q9NWF4 448 aa7.49□□□□□ -1.21
NEK1-204ENST00000509912 KANK1Q14678 1352 aa7.49□□□□□ -1.21
NEK1-204ENST00000509912 SCAF11Q99590 1463 aaKnown RBP7.49□□□□□ -1.21
NEK1-204ENST00000509912 XRN1Q8IZH2 1706 aaKnown RBP7.49□□□□□ -1.21
NEK1-204ENST00000509912 AHDC1Q5TGY3 1603 aaPredicted RBP7.48□□□□□ -1.21
NEK1-204ENST00000509912 KIAA1522Q9P206 1035 aaPredicted RBP7.48□□□□□ -1.21
NEK1-204ENST00000509912 KIAA1024Q9UPX6 916 aa7.48□□□□□ -1.21
NEK1-204ENST00000509912 PLEKHG1Q9ULL1 1385 aa7.48□□□□□ -1.21
NEK1-204ENST00000509912 TRPM2O94759 1503 aa7.47□□□□□ -1.21
NEK1-204ENST00000509912 PRMT3O60678 531 aa7.47□□□□□ -1.21
NEK1-204ENST00000509912 EIF4G2P78344 907 aaKnown RBP eCLIP7.47□□□□□ -1.21
NEK1-204ENST00000509912 MORN1Q5T089 497 aa7.47□□□□□ -1.21
NEK1-204ENST00000509912 SOCS7O14512 581 aa7.47□□□□□ -1.21
NEK1-204ENST00000509912 ZNF211Q13398 564 aaPredicted RBP7.47□□□□□ -1.21
NEK1-204ENST00000509912 RETREG3Q86VR2 466 aa7.47□□□□□ -1.21
NEK1-204ENST00000509912 CARD14Q9BXL6 1004 aa7.47□□□□□ -1.21
NEK1-204ENST00000509912 RABGEF1Q9UJ41 708 aa7.47□□□□□ -1.21
NEK1-204ENST00000509912 ZFRQ96KR1 1074 aaKnown RBP7.47□□□□□ -1.21
NEK1-204ENST00000509912 STAC3Q96MF2 364 aa7.47□□□□□ -1.21
NEK1-204ENST00000509912 MKNK1Q9BUB5 465 aa7.47□□□□□ -1.21
NEK1-204ENST00000509912 ABL1P00519 1130 aa7.46□□□□□ -1.21
NEK1-204ENST00000509912 TSPY4P0CV99 314 aa7.46□□□□□ -1.21
NEK1-204ENST00000509912 TSPY10P0CW01 314 aa7.46□□□□□ -1.21
NEK1-204ENST00000509912 OCSTAMPQ9BR26 566 aa7.46□□□□□ -1.21
NEK1-204ENST00000509912 BIN2Q9UBW5 565 aaPredicted RBP7.46□□□□□ -1.21
NEK1-204ENST00000509912 SHPRHQ149N8 1683 aa7.46□□□□□ -1.22
NEK1-204ENST00000509912 SPHKAPQ2M3C7 1700 aa7.46□□□□□ -1.22
NEK1-204ENST00000509912 ZBBXA8MT70 800 aa7.46□□□□□ -1.22
NEK1-204ENST00000509912 USP17L15C9J2P7 530 aa7.46□□□□□ -1.22
NEK1-204ENST00000509912 USP17L10C9JJH3 530 aa7.46□□□□□ -1.22
NEK1-204ENST00000509912 USP17L13C9JLJ4 530 aa7.46□□□□□ -1.22
NEK1-204ENST00000509912 USP17L12C9JPN9 530 aa7.46□□□□□ -1.22
NEK1-204ENST00000509912 USP17L11C9JVI0 530 aa7.46□□□□□ -1.22
NEK1-204ENST00000509912 USP17L21D6R901 530 aa7.46□□□□□ -1.22
NEK1-204ENST00000509912 USP17L18D6R9N7 530 aa7.46□□□□□ -1.22
NEK1-204ENST00000509912 USP17L22D6RA61 530 aa7.46□□□□□ -1.22
NEK1-204ENST00000509912 USP17L17D6RBQ6 530 aa7.46□□□□□ -1.22
NEK1-204ENST00000509912 USP17L19D6RCP7 530 aa7.46□□□□□ -1.22
NEK1-204ENST00000509912 USP17L20D6RJB6 530 aa7.46□□□□□ -1.22
NEK1-204ENST00000509912 HDGFP51858 240 aaKnown RBP7.46□□□□□ -1.22
NEK1-204ENST00000509912 CLDN10P78369 228 aa7.46□□□□□ -1.22
NEK1-204ENST00000509912 USP17L24Q0WX57 530 aa7.46□□□□□ -1.22
NEK1-204ENST00000509912 FAM98CQ17RN3 349 aaKnown RBP7.46□□□□□ -1.22
NEK1-204ENST00000509912 DISP3Q9P2K9 1392 aa7.46□□□□□ -1.22
NEK1-204ENST00000509912 LRRC7Q96NW7 1537 aa7.45□□□□□ -1.22
NEK1-204ENST00000509912 NR1H3Q13133 447 aa7.45□□□□□ -1.22
NEK1-204ENST00000509912 PRIMPOLQ96LW4 560 aa7.45□□□□□ -1.22
NEK1-204ENST00000509912 E9PCH4 1651 aa7.45□□□□□ -1.22
NEK1-204ENST00000509912 SETD1AO15047 1707 aaKnown RBP7.45□□□□□ -1.22
NEK1-204ENST00000509912 CDK12Q9NYV4 1490 aaPredicted RBP7.45□□□□□ -1.22
NEK1-204ENST00000509912 STRCP1A6NGW2 1772 aa7.45□□□□□ -1.22
NEK1-204ENST00000509912 FKBPLQ9UIM3 349 aa7.45□□□□□ -1.22
NEK1-204ENST00000509912 IFT172Q9UG01 1749 aa7.45□□□□□ -1.22
NEK1-204ENST00000509912 HOXB1P14653 301 aaPredicted RBP7.44□□□□□ -1.22
NEK1-204ENST00000509912 DPYDQ12882 1025 aa7.44□□□□□ -1.22
NEK1-204ENST00000509912 ZSWIM6Q9HCJ5 1215 aa7.44□□□□□ -1.22
NEK1-204ENST00000509912 PCDHB9Q9Y5E1 797 aa7.44□□□□□ -1.22
NEK1-204ENST00000509912 POTEHQ6S545 545 aa7.44□□□□□ -1.22
NEK1-204ENST00000509912 SIRT1Q96EB6 747 aa7.44□□□□□ -1.22
NEK1-204ENST00000509912 COL22A1Q8NFW1 1626 aaPredicted RBP7.44□□□□□ -1.22
NEK1-204ENST00000509912 MAGEB6P1A0A0J9YX57 407 aa7.44□□□□□ -1.22
NEK1-204ENST00000509912 MRRFQ96E11 262 aaKnown RBP7.44□□□□□ -1.22
NEK1-204ENST00000509912 RPGRIP1LQ68CZ1 1315 aa7.44□□□□□ -1.22
NEK1-204ENST00000509912 TMEM2Q9UHN6 1383 aa7.44□□□□□ -1.22
NEK1-204ENST00000509912 BCAMP50895 628 aa7.43□□□□□ -1.22
NEK1-204ENST00000509912 PTK7Q13308 1070 aa7.43□□□□□ -1.22
NEK1-204ENST00000509912 TXNDC2Q86VQ3 553 aa7.43□□□□□ -1.22
NEK1-204ENST00000509912 OGFOD1Q8N543 542 aa7.43□□□□□ -1.22
NEK1-204ENST00000509912 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.43□□□□□ -1.22
NEK1-204ENST00000509912 GIPC2Q8TF65 315 aa7.43□□□□□ -1.22
NEK1-204ENST00000509912 KIF15Q9NS87 1388 aa7.43□□□□□ -1.22
NEK1-204ENST00000509912 STAU1O95793 577 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms