RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 CEP350Q5VT06 3117 aa14.32□□□□□ -0.12
MBD4-208ENST00000509828 PHKG2P15735 406 aa14.32□□□□□ -0.12
MBD4-208ENST00000509828 EYA1Q99502 592 aa14.32□□□□□ -0.12
MBD4-208ENST00000509828 POLR3GLQ9BT43 218 aa14.32□□□□□ -0.12
MBD4-208ENST00000509828 GOLGB1Q14789 3259 aaKnown RBP14.32□□□□□ -0.12
MBD4-208ENST00000509828 TNNT2P45379 298 aaPredicted RBP14.31□□□□□ -0.12
MBD4-208ENST00000509828 ATG3Q9NT62 314 aa14.31□□□□□ -0.12
MBD4-208ENST00000509828 DPEP1P16444 411 aa14.3□□□□□ -0.12
MBD4-208ENST00000509828 CARD14Q9BXL6 1004 aa14.3□□□□□ -0.12
MBD4-208ENST00000509828 WASHC2AQ641Q2 1341 aa14.3□□□□□ -0.12
MBD4-208ENST00000509828 HSP90AB1P08238 724 aaKnown RBP14.29□□□□□ -0.12
MBD4-208ENST00000509828 ARHGEF1Q92888 912 aaKnown RBP14.29□□□□□ -0.12
MBD4-208ENST00000509828 NMRK2Q9NPI5 230 aa14.29□□□□□ -0.12
MBD4-208ENST00000509828 TAF1LQ8IZX4 1826 aa14.29□□□□□ -0.12
MBD4-208ENST00000509828 ADRA2BP18089 450 aa14.28□□□□□ -0.12
MBD4-208ENST00000509828 CABP4P57796 275 aa14.28□□□□□ -0.12
MBD4-208ENST00000509828 PLEKHO1Q53GL0 409 aaPredicted RBP14.28□□□□□ -0.12
MBD4-208ENST00000509828 C9orf131Q5VYM1 1079 aa14.28□□□□□ -0.12
MBD4-208ENST00000509828 ERVV-2B6SEH9 535 aa14.27□□□□□ -0.13
MBD4-208ENST00000509828 RC3H1Q5TC82 1133 aaKnown RBP14.27□□□□□ -0.13
MBD4-208ENST00000509828 PIM2Q9P1W9 311 aa14.27□□□□□ -0.13
MBD4-208ENST00000509828 PXDNLA1KZ92 1463 aa14.26□□□□□ -0.13
MBD4-208ENST00000509828 KDM2BQ8NHM5 1336 aa14.26□□□□□ -0.13
MBD4-208ENST00000509828 RPS6KA4O75676 772 aa14.26□□□□□ -0.13
MBD4-208ENST00000509828 DALRD3Q5D0E6 543 aaKnown RBP14.26□□□□□ -0.13
MBD4-208ENST00000509828 RBM46Q8TBY0 533 aaKnown RBP14.26□□□□□ -0.13
MBD4-208ENST00000509828 DCAF5Q96JK2 942 aa14.26□□□□□ -0.13
MBD4-208ENST00000509828 POLKQ9UBT6 870 aa14.26□□□□□ -0.13
MBD4-208ENST00000509828 ITGB4P16144 1822 aa14.26□□□□□ -0.13
MBD4-208ENST00000509828 UBR3Q6ZT12 1888 aa14.25□□□□□ -0.13
MBD4-208ENST00000509828 PTCD1O75127 700 aaKnown RBP14.25□□□□□ -0.13
MBD4-208ENST00000509828 GYS1P13807 737 aa14.25□□□□□ -0.13
MBD4-208ENST00000509828 EIF4A2Q14240 407 aaKnown RBP14.25□□□□□ -0.13
MBD4-208ENST00000509828 ZNF530Q6P9A1 599 aaPredicted RBP14.25□□□□□ -0.13
MBD4-208ENST00000509828 TOGARAM1Q9Y4F4 1720 aa14.24□□□□□ -0.13
MBD4-208ENST00000509828 CICQ96RK0 1608 aaPredicted RBP14.24□□□□□ -0.13
MBD4-208ENST00000509828 MTHFSP49914 203 aa14.24□□□□□ -0.13
MBD4-208ENST00000509828 C1orf141Q5JVX7 400 aa14.24□□□□□ -0.13
MBD4-208ENST00000509828 DNAJC5GQ8N7S2 189 aa14.24□□□□□ -0.13
MBD4-208ENST00000509828 RNF181Q9P0P0 153 aa14.24□□□□□ -0.13
MBD4-208ENST00000509828 KIF20BQ96Q89 1820 aa14.24□□□□□ -0.13
MBD4-208ENST00000509828 CNTNAP4Q9C0A0 1308 aa14.23□□□□□ -0.13
MBD4-208ENST00000509828 RRAGCQ9HB90 399 aa14.23□□□□□ -0.13
MBD4-208ENST00000509828 PKD1L3Q7Z443 1732 aa14.22□□□□□ -0.13
MBD4-208ENST00000509828 CAPN15O75808 1086 aa14.22□□□□□ -0.13
MBD4-208ENST00000509828 FSTL1Q12841 308 aa14.22□□□□□ -0.13
MBD4-208ENST00000509828 AMOTQ4VCS5 1084 aa14.22□□□□□ -0.13
MBD4-208ENST00000509828 SLC4A9Q96Q91 983 aa14.22□□□□□ -0.13
MBD4-208ENST00000509828 C10orf71Q711Q0 1435 aa14.22□□□□□ -0.13
MBD4-208ENST00000509828 PLEKHG2Q9H7P9 1386 aa14.22□□□□□ -0.13
MBD4-208ENST00000509828 ZPR1O75312 459 aa14.21□□□□□ -0.13
MBD4-208ENST00000509828 HTRA3P83110 453 aa14.21□□□□□ -0.13
MBD4-208ENST00000509828 KLRG1Q96E93 195 aa14.21□□□□□ -0.13
MBD4-208ENST00000509828 SRP68Q9UHB9 627 aaKnown RBP14.21□□□□□ -0.13
MBD4-208ENST00000509828 NCAPD2Q15021 1401 aa14.21□□□□□ -0.13
MBD4-208ENST00000509828 CRKLP46109 303 aaKnown RBP14.2□□□□□ -0.14
MBD4-208ENST00000509828 KCNA3P22001 575 aa14.19□□□□□ -0.14
MBD4-208ENST00000509828 CHRNA5P30532 468 aa14.19□□□□□ -0.14
MBD4-208ENST00000509828 FKBP8Q14318 412 aa14.19□□□□□ -0.14
MBD4-208ENST00000509828 NFATC2IPQ8NCF5 419 aa14.19□□□□□ -0.14
MBD4-208ENST00000509828 KDRP35968 1356 aa14.19□□□□□ -0.14
MBD4-208ENST00000509828 N4BP2Q86UW6 1770 aaPredicted RBP14.19□□□□□ -0.14
MBD4-208ENST00000509828 MAP2P11137 1827 aaKnown RBP14.18□□□□□ -0.14
MBD4-208ENST00000509828 SMC1BQ8NDV3 1235 aa14.18□□□□□ -0.14
MBD4-208ENST00000509828 TNS4Q8IZW8 715 aa14.17□□□□□ -0.14
MBD4-208ENST00000509828 USP42Q9H9J4 1324 aaKnown RBP14.16□□□□□ -0.14
MBD4-208ENST00000509828 KCPQ6ZWJ8 1503 aa14.16□□□□□ -0.14
MBD4-208ENST00000509828 C4AP0C0L4 1744 aa14.16□□□□□ -0.14
MBD4-208ENST00000509828 DDR1Q08345 913 aa14.16□□□□□ -0.14
MBD4-208ENST00000509828 COL13A1Q5TAT6 717 aaPredicted RBP14.16□□□□□ -0.14
MBD4-208ENST00000509828 MORC1Q86VD1 984 aa14.16□□□□□ -0.14
MBD4-208ENST00000509828 USPL1Q5W0Q7 1092 aa14.15□□□□□ -0.14
MBD4-208ENST00000509828 SULT6B1Q6IMI4 303 aa14.15□□□□□ -0.14
MBD4-208ENST00000509828 VEGFAP15692 232 aaPredicted RBP14.14□□□□□ -0.15
MBD4-208ENST00000509828 JMYQ8N9B5 988 aa14.14□□□□□ -0.15
MBD4-208ENST00000509828 POLRMTO00411 1230 aaKnown RBP14.13□□□□□ -0.15
MBD4-208ENST00000509828 AEBP1Q8IUX7 1158 aa14.13□□□□□ -0.15
MBD4-208ENST00000509828 DNAJC10Q8IXB1 793 aa14.13□□□□□ -0.15
MBD4-208ENST00000509828 PANK3Q9H999 370 aa14.13□□□□□ -0.15
MBD4-208ENST00000509828 KIF13BQ9NQT8 1826 aa14.13□□□□□ -0.15
MBD4-208ENST00000509828 LMNB1P20700 586 aa14.12□□□□□ -0.15
MBD4-208ENST00000509828 TM4SF1P30408 202 aa14.12□□□□□ -0.15
MBD4-208ENST00000509828 RASSF7Q02833 373 aa14.12□□□□□ -0.15
MBD4-208ENST00000509828 INTS5Q6P9B9 1019 aaKnown RBP14.12□□□□□ -0.15
MBD4-208ENST00000509828 TTLL6Q8N841 843 aa14.12□□□□□ -0.15
MBD4-208ENST00000509828 KDM6AO15550 1401 aaPredicted RBP14.12□□□□□ -0.15
MBD4-208ENST00000509828 GLTPD2A6NH11 291 aa14.11□□□□□ -0.15
MBD4-208ENST00000509828 H0YIN7 160 aa14.11□□□□□ -0.15
MBD4-208ENST00000509828 DPY19L2Q6NUT2 758 aa14.11□□□□□ -0.15
MBD4-208ENST00000509828 C2CD5Q86YS7 1000 aa14.11□□□□□ -0.15
MBD4-208ENST00000509828 WDR90Q96KV7 1748 aa14.1□□□□□ -0.15
MBD4-208ENST00000509828 SERPINB2P05120 415 aa14.1□□□□□ -0.15
MBD4-208ENST00000509828 AKAP4Q5JQC9 854 aa14.1□□□□□ -0.15
MBD4-208ENST00000509828 BICDL1Q6ZP65 573 aa14.1□□□□□ -0.15
MBD4-208ENST00000509828 NARFQ9UHQ1 456 aa14.1□□□□□ -0.15
MBD4-208ENST00000509828 ZC3H4Q9UPT8 1303 aaKnown RBP14.1□□□□□ -0.15
MBD4-208ENST00000509828 KIAA1551Q9HCM1 1747 aa14.1□□□□□ -0.15
MBD4-208ENST00000509828 NPHP1O15259 732 aa14.09□□□□□ -0.15
MBD4-208ENST00000509828 CANXP27824 592 aaKnown RBP14.09□□□□□ -0.15
MBD4-208ENST00000509828 NFIXQ14938 502 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms